RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
HIF3A-209ENST00000525854 POLR2AP24928 1970 aaKnown RBP14.59□□□□□ -0.07
HIF3A-209ENST00000525854 CERS5Q8N5B7 392 aa14.58□□□□□ -0.08
HIF3A-209ENST00000525854 MTMR14Q8NCE2 650 aa14.58□□□□□ -0.08
HIF3A-209ENST00000525854 FAM155AB1AL88 458 aaPredicted RBP14.57□□□□□ -0.08
HIF3A-209ENST00000525854 MYO1BO43795 1136 aa14.57□□□□□ -0.08
HIF3A-209ENST00000525854 UBTFL1P0CB47 393 aaPredicted RBP14.57□□□□□ -0.08
HIF3A-209ENST00000525854 GYG1P46976 350 aa14.57□□□□□ -0.08
HIF3A-209ENST00000525854 VPS37DQ86XT2 251 aa14.57□□□□□ -0.08
HIF3A-209ENST00000525854 TDRD7Q8NHU6 1098 aaKnown RBP14.57□□□□□ -0.08
HIF3A-209ENST00000525854 ZBED3Q96IU2 234 aaPredicted RBP14.57□□□□□ -0.08
HIF3A-209ENST00000525854 FAM84BQ96KN1 310 aaPredicted RBP14.57□□□□□ -0.08
HIF3A-209ENST00000525854 FAM205AQ6ZU69 1335 aa14.57□□□□□ -0.08
HIF3A-209ENST00000525854 F8W031 263 aaPredicted RBP14.56□□□□□ -0.08
HIF3A-209ENST00000525854 PDE8BO95263 885 aa14.56□□□□□ -0.08
HIF3A-209ENST00000525854 SLC10A3P09131 477 aa14.56□□□□□ -0.08
HIF3A-209ENST00000525854 RARSP54136 660 aaKnown RBP14.56□□□□□ -0.08
HIF3A-209ENST00000525854 TTLL12Q14166 644 aaPredicted RBP14.56□□□□□ -0.08
HIF3A-209ENST00000525854 LRRC24Q50LG9 513 aa14.56□□□□□ -0.08
HIF3A-209ENST00000525854 CAVIN4Q5BKX8 364 aa14.56□□□□□ -0.08
HIF3A-209ENST00000525854 ARHGAP45Q92619 1136 aa14.56□□□□□ -0.08
HIF3A-209ENST00000525854 SCAF8Q9UPN6 1271 aaKnown RBP14.56□□□□□ -0.08
HIF3A-209ENST00000525854 KIF16BQ96L93 1317 aa14.56□□□□□ -0.08
HIF3A-209ENST00000525854 CAPN15O75808 1086 aa14.55□□□□□ -0.08
HIF3A-209ENST00000525854 KIF23Q02241 960 aaPredicted RBP14.55□□□□□ -0.08
HIF3A-209ENST00000525854 CFAP100Q494V2 611 aa14.55□□□□□ -0.08
HIF3A-209ENST00000525854 MFSD14BQ5SR56 506 aa14.55□□□□□ -0.08
HIF3A-209ENST00000525854 PRAMEF18Q5VWM3 479 aa14.55□□□□□ -0.08
HIF3A-209ENST00000525854 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
HIF3A-209ENST00000525854 KLHDC4Q8TBB5 520 aa14.55□□□□□ -0.08
HIF3A-209ENST00000525854 ZIC5Q96T25 663 aa14.55□□□□□ -0.08
HIF3A-209ENST00000525854 JAG2Q9Y219 1238 aa14.55□□□□□ -0.08
HIF3A-209ENST00000525854 A0A1B0GUL6 1792 aa14.55□□□□□ -0.08
HIF3A-209ENST00000525854 ZNF646O15015 1829 aaPredicted RBP14.55□□□□□ -0.08
HIF3A-209ENST00000525854 SPDYE2BA6NHP3 402 aa14.54□□□□□ -0.08
HIF3A-209ENST00000525854 EYA2O00167 538 aa14.54□□□□□ -0.08
HIF3A-209ENST00000525854 IPO8O15397 1037 aaKnown RBP14.54□□□□□ -0.08
HIF3A-209ENST00000525854 FRAT2O75474 233 aaPredicted RBP14.54□□□□□ -0.08
HIF3A-209ENST00000525854 SPDYE6P0CI01 402 aa14.54□□□□□ -0.08
HIF3A-209ENST00000525854 RBM5P52756 815 aaKnown RBP eCLIP14.54□□□□□ -0.08
HIF3A-209ENST00000525854 PUM3Q15397 648 aaKnown RBP14.54□□□□□ -0.08
HIF3A-209ENST00000525854 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
HIF3A-209ENST00000525854 ARMC9Q7Z3E5 817 aa14.54□□□□□ -0.08
HIF3A-209ENST00000525854 FBXO33Q7Z6M2 555 aa14.54□□□□□ -0.08
HIF3A-209ENST00000525854 VGLL2Q8N8G2 317 aa14.54□□□□□ -0.08
HIF3A-209ENST00000525854 PPP2R3BQ9Y5P8 575 aa14.54□□□□□ -0.08
HIF3A-209ENST00000525854 COL1A1P02452 1464 aaPredicted RBP14.54□□□□□ -0.08
HIF3A-209ENST00000525854 PAPPA2Q9BXP8 1791 aa14.54□□□□□ -0.08
HIF3A-209ENST00000525854 UBE2Q2LH0YL09 131 aa14.53□□□□□ -0.08
HIF3A-209ENST00000525854 IFIT1P09914 478 aaKnown RBP14.53□□□□□ -0.08
HIF3A-209ENST00000525854 RFX5P48382 616 aaPredicted RBP14.53□□□□□ -0.08
HIF3A-209ENST00000525854 RASAL3Q86YV0 1011 aa14.53□□□□□ -0.08
HIF3A-209ENST00000525854 TBC1D22AQ8WUA7 517 aa14.53□□□□□ -0.08
HIF3A-209ENST00000525854 DEFB129Q9H1M3 183 aa14.53□□□□□ -0.08
HIF3A-209ENST00000525854 SAGE1Q9NXZ1 904 aa14.53□□□□□ -0.08
HIF3A-209ENST00000525854 TSKSQ9UJT2 592 aa14.53□□□□□ -0.08
HIF3A-209ENST00000525854 SERPINA10Q9UK55 444 aa14.53□□□□□ -0.08
HIF3A-209ENST00000525854 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
HIF3A-209ENST00000525854 TTF2Q9UNY4 1162 aaKnown RBP14.53□□□□□ -0.08
HIF3A-209ENST00000525854 PTPN12Q05209 780 aaKnown RBP14.52□□□□□ -0.09
HIF3A-209ENST00000525854 MOB2Q70IA6 237 aa14.52□□□□□ -0.09
HIF3A-209ENST00000525854 PRMT6Q96LA8 375 aaPredicted RBP14.52□□□□□ -0.09
HIF3A-209ENST00000525854 CIAO1O76071 339 aa14.51□□□□□ -0.09
HIF3A-209ENST00000525854 SLC5A1P13866 664 aa14.51□□□□□ -0.09
HIF3A-209ENST00000525854 FGFR2P21802 821 aa14.51□□□□□ -0.09
HIF3A-209ENST00000525854 TNFAIP1Q13829 316 aa14.51□□□□□ -0.09
HIF3A-209ENST00000525854 SUPT20HL1Q3ZLR7 823 aa14.51□□□□□ -0.09
HIF3A-209ENST00000525854 INTS3Q68E01 1043 aaKnown RBP14.51□□□□□ -0.09
HIF3A-209ENST00000525854 MIER1Q8N108 512 aa14.51□□□□□ -0.09
HIF3A-209ENST00000525854 LPIN2Q92539 896 aa14.51□□□□□ -0.09
HIF3A-209ENST00000525854 VEZTQ9HBM0 779 aa14.51□□□□□ -0.09
HIF3A-209ENST00000525854 LRRFIP2Q9Y608 721 aaKnown RBP14.51□□□□□ -0.09
HIF3A-209ENST00000525854 CLRN2A0PK11 232 aa14.5□□□□□ -0.09
HIF3A-209ENST00000525854 PPP1R12BO60237 982 aaPredicted RBP14.5□□□□□ -0.09
HIF3A-209ENST00000525854 GNAI3P08754 354 aa14.5□□□□□ -0.09
HIF3A-209ENST00000525854 BCAMP50895 628 aa14.5□□□□□ -0.09
HIF3A-209ENST00000525854 CHAF1AQ13111 956 aaPredicted RBP14.5□□□□□ -0.09
HIF3A-209ENST00000525854 CSRNP1Q96S65 589 aa14.5□□□□□ -0.09
HIF3A-209ENST00000525854 CEP126Q9P2H0 1117 aa14.5□□□□□ -0.09
HIF3A-209ENST00000525854 IQSEC3Q9UPP2 1182 aaPredicted RBP14.5□□□□□ -0.09
HIF3A-209ENST00000525854 PCDHAC2Q9Y5I4 1007 aa14.5□□□□□ -0.09
HIF3A-209ENST00000525854 IL15P40933 162 aaPredicted RBP14.49□□□□□ -0.09
HIF3A-209ENST00000525854 HDLBPQ00341 1268 aaKnown RBP14.49□□□□□ -0.09
HIF3A-209ENST00000525854 HNRNPUQ00839 825 aaKnown RBP eCLIP14.49□□□□□ -0.09
HIF3A-209ENST00000525854 PRKG1Q13976 671 aa14.49□□□□□ -0.09
HIF3A-209ENST00000525854 SPDYE2Q495Y8 402 aa14.49□□□□□ -0.09
HIF3A-209ENST00000525854 ATG9AQ7Z3C6 839 aa14.49□□□□□ -0.09
HIF3A-209ENST00000525854 DZIP1LQ8IYY4 767 aaKnown RBP14.49□□□□□ -0.09
HIF3A-209ENST00000525854 MEIS3Q99687 375 aa14.49□□□□□ -0.09
HIF3A-209ENST00000525854 SIL1Q9H173 461 aa14.49□□□□□ -0.09
HIF3A-209ENST00000525854 RNF186Q9NXI6 227 aa14.49□□□□□ -0.09
HIF3A-209ENST00000525854 ANGEL1Q9UNK9 670 aaKnown RBP14.49□□□□□ -0.09
HIF3A-209ENST00000525854 SUGT1Q9Y2Z0 365 aa14.49□□□□□ -0.09
HIF3A-209ENST00000525854 MAST3O60307 1309 aa14.48□□□□□ -0.09
HIF3A-209ENST00000525854 TRPA1O75762 1119 aa14.48□□□□□ -0.09
HIF3A-209ENST00000525854 CRKP46108 304 aa14.48□□□□□ -0.09
HIF3A-209ENST00000525854 RASA3Q14644 834 aa14.48□□□□□ -0.09
HIF3A-209ENST00000525854 LDLRAD1Q5T700 205 aa14.48□□□□□ -0.09
HIF3A-209ENST00000525854 ATF7IPQ6VMQ6 1270 aa14.48□□□□□ -0.09
HIF3A-209ENST00000525854 FRAT1Q92837 279 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms