RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 MTX1Q13505 466 aa23.06■■□□□ 1.28
TSPAN4-215ENST00000525334 ANGEL2Q5VTE6 544 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-215ENST00000525334 POLR2AP24928 1970 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-215ENST00000525334 SRGAP3O43295 1099 aa23.05■■□□□ 1.28
TSPAN4-215ENST00000525334 FBXO33Q7Z6M2 555 aa23.05■■□□□ 1.28
TSPAN4-215ENST00000525334 ZNF408Q9H9D4 720 aa23.05■■□□□ 1.28
TSPAN4-215ENST00000525334 COPRSQ9NQ92 184 aa23.05■■□□□ 1.28
TSPAN4-215ENST00000525334 FAM205AQ6ZU69 1335 aa23.05■■□□□ 1.28
TSPAN4-215ENST00000525334 HSPA1AP0DMV8 641 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 HSPA1BP0DMV9 641 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 MMP14P50281 582 aa23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 FKBP1AP62942 108 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 NBPF9Q3BBW0 867 aa23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 CAVIN4Q5BKX8 364 aa23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 VPS37DQ86XT2 251 aa23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 SULF1Q8IWU6 871 aa23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 HDAC9Q9UKV0 1011 aa23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 TLL2Q9Y6L7 1015 aa23.04■■□□□ 1.28
TSPAN4-215ENST00000525334 IFIT1P09914 478 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-215ENST00000525334 IL15P40933 162 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-215ENST00000525334 ITPRIPQ8IWB1 547 aa23.03■■□□□ 1.28
TSPAN4-215ENST00000525334 ARAP2Q8WZ64 1704 aa23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 F8W031 263 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 WNT10BO00744 389 aa23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 SLC5A1P13866 664 aa23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 BCAMP50895 628 aa23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 LPIN2Q92539 896 aa23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 CEP126Q9P2H0 1117 aa23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 IQSEC3Q9UPP2 1182 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 PITPNM2Q9BZ72 1349 aa23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 WDR33Q9C0J8 1336 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-215ENST00000525334 SAPCD2Q86UD0 394 aa23.01■■□□□ 1.27
TSPAN4-215ENST00000525334 PNMA6EA0A0J9YXQ4 647 aa23■■□□□ 1.27
TSPAN4-215ENST00000525334 ATP2B3Q16720 1220 aa23■■□□□ 1.27
TSPAN4-215ENST00000525334 MFSD14BQ5SR56 506 aa23■■□□□ 1.27
TSPAN4-215ENST00000525334 ZBED3Q96IU2 234 aaPredicted RBP23■■□□□ 1.27
TSPAN4-215ENST00000525334 PANK1Q8TE04 598 aa22.99■■□□□ 1.27
TSPAN4-215ENST00000525334 C1orf115Q9H7X2 142 aa22.99■■□□□ 1.27
TSPAN4-215ENST00000525334 RCAN3Q9UKA8 241 aa22.99■■□□□ 1.27
TSPAN4-215ENST00000525334 SCAF8Q9UPN6 1271 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-215ENST00000525334 ZBTB7BO15156 539 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-215ENST00000525334 FRAT2O75474 233 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-215ENST00000525334 CHAF1AQ13111 956 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-215ENST00000525334 DLGAP5Q15398 846 aa22.98■■□□□ 1.27
TSPAN4-215ENST00000525334 CDCA5Q96FF9 252 aa22.98■■□□□ 1.27
TSPAN4-215ENST00000525334 HHIPL1Q96JK4 782 aa22.98■■□□□ 1.27
TSPAN4-215ENST00000525334 CAPNS2Q96L46 248 aa22.98■■□□□ 1.27
TSPAN4-215ENST00000525334 ECE1P42892 770 aa22.97■■□□□ 1.27
TSPAN4-215ENST00000525334 CYP4F22Q6NT55 531 aa22.97■■□□□ 1.27
TSPAN4-215ENST00000525334 PAXIP1Q6ZW49 1069 aaPredicted RBP22.97■■□□□ 1.27
TSPAN4-215ENST00000525334 MTMR14Q8NCE2 650 aa22.97■■□□□ 1.27
TSPAN4-215ENST00000525334 WBP1LQ9NX94 342 aa22.97■■□□□ 1.27
TSPAN4-215ENST00000525334 PCDHAC2Q9Y5I4 1007 aa22.97■■□□□ 1.27
TSPAN4-215ENST00000525334 CFAP100Q494V2 611 aa22.96■■□□□ 1.27
TSPAN4-215ENST00000525334 TFCP2Q12800 502 aa22.95■■□□□ 1.26
TSPAN4-215ENST00000525334 GRIK5Q16478 980 aa22.95■■□□□ 1.26
TSPAN4-215ENST00000525334 COL13A1Q5TAT6 717 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-215ENST00000525334 TBC1D22AQ8WUA7 517 aa22.95■■□□□ 1.26
TSPAN4-215ENST00000525334 GBA2Q9HCG7 927 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-215ENST00000525334 MYH13Q9UKX3 1938 aa22.95■■□□□ 1.26
TSPAN4-215ENST00000525334 TTF2Q9UNY4 1162 aaKnown RBP22.95■■□□□ 1.26
TSPAN4-215ENST00000525334 ECM29Q5VYK3 1845 aa22.94■■□□□ 1.26
TSPAN4-215ENST00000525334 COL1A1P02452 1464 aaPredicted RBP22.94■■□□□ 1.26
TSPAN4-215ENST00000525334 SPDYE2BA6NHP3 402 aa22.94■■□□□ 1.26
TSPAN4-215ENST00000525334 SPDYE6P0CI01 402 aa22.94■■□□□ 1.26
TSPAN4-215ENST00000525334 MS4A1P11836 297 aa22.94■■□□□ 1.26
TSPAN4-215ENST00000525334 POLA2Q14181 598 aa22.94■■□□□ 1.26
TSPAN4-215ENST00000525334 THSD7BQ9C0I4 1608 aa22.93■■□□□ 1.26
TSPAN4-215ENST00000525334 ADORA1P30542 326 aa22.93■■□□□ 1.26
TSPAN4-215ENST00000525334 RBM5P52756 815 aaKnown RBP eCLIP22.93■■□□□ 1.26
TSPAN4-215ENST00000525334 ATP8B2P98198 1209 aa22.93■■□□□ 1.26
TSPAN4-215ENST00000525334 MAP2K1Q02750 393 aaPredicted RBP22.93■■□□□ 1.26
TSPAN4-215ENST00000525334 GRM1Q13255 1194 aa22.93■■□□□ 1.26
TSPAN4-215ENST00000525334 APOBEC3FQ8IUX4 373 aaKnown RBP22.93■■□□□ 1.26
TSPAN4-215ENST00000525334 C2orf69Q8N8R5 385 aa22.93■■□□□ 1.26
TSPAN4-215ENST00000525334 SERPINA10Q9UK55 444 aa22.93■■□□□ 1.26
TSPAN4-215ENST00000525334 AOX1Q06278 1338 aa22.92■■□□□ 1.26
TSPAN4-215ENST00000525334 FOXN1O15353 648 aa22.92■■□□□ 1.26
TSPAN4-215ENST00000525334 MAP2K2P36507 400 aa22.92■■□□□ 1.26
TSPAN4-215ENST00000525334 HUNKP57058 714 aa22.92■■□□□ 1.26
TSPAN4-215ENST00000525334 PRAMEF18Q5VWM3 479 aa22.92■■□□□ 1.26
TSPAN4-215ENST00000525334 SSH3Q8TE77 659 aa22.92■■□□□ 1.26
TSPAN4-215ENST00000525334 PRMT6Q96LA8 375 aaPredicted RBP22.92■■□□□ 1.26
TSPAN4-215ENST00000525334 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.92■■□□□ 1.26
TSPAN4-215ENST00000525334 A0A1B0GUL7 405 aa22.91■■□□□ 1.26
TSPAN4-215ENST00000525334 PHKA1P46020 1223 aa22.91■■□□□ 1.26
TSPAN4-215ENST00000525334 TIMM10P62072 90 aa22.91■■□□□ 1.26
TSPAN4-215ENST00000525334 G3BP1Q13283 466 aaKnown RBP eCLIP22.91■■□□□ 1.26
TSPAN4-215ENST00000525334 AIDAQ96BJ3 306 aa22.91■■□□□ 1.26
TSPAN4-215ENST00000525334 GNL3LQ9NVN8 582 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-215ENST00000525334 AKAP2Q9Y2D5 859 aa22.91■■□□□ 1.26
TSPAN4-215ENST00000525334 CLRN2A0PK11 232 aa22.9■■□□□ 1.26
TSPAN4-215ENST00000525334 MYO1BO43795 1136 aa22.9■■□□□ 1.26
TSPAN4-215ENST00000525334 AOC2O75106 756 aa22.9■■□□□ 1.26
TSPAN4-215ENST00000525334 MVPQ14764 893 aaKnown RBP22.9■■□□□ 1.26
TSPAN4-215ENST00000525334 PAPPA2Q9BXP8 1791 aa22.89■■□□□ 1.26
TSPAN4-215ENST00000525334 CRKP46108 304 aa22.89■■□□□ 1.25
TSPAN4-215ENST00000525334 CCDC102BQ68D86 513 aa22.89■■□□□ 1.25
TSPAN4-215ENST00000525334 WDR66Q8TBY9 1149 aa22.89■■□□□ 1.25
TSPAN4-215ENST00000525334 CTCFP49711 727 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms