RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 ANKRD18BA2A2Z9 1011 aa12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 TAF5LO75529 589 aa12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 NOM1Q5C9Z4 860 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 LDLRAD1Q5T700 205 aa12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 SPRYD7Q5W111 196 aa12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 CERS5Q8N5B7 392 aa12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 LINS1Q8NG48 757 aa12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 R3HDMLQ9H3Y0 253 aa12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 SSC5DA1L4H1 1573 aa12.2□□□□□ -0.46
TRAPPC4-206ENST00000525303 IRS2Q9Y4H2 1338 aa12.19□□□□□ -0.46
TRAPPC4-206ENST00000525303 FKTNO75072 461 aa12.19□□□□□ -0.46
TRAPPC4-206ENST00000525303 DLGAP5Q15398 846 aa12.19□□□□□ -0.46
TRAPPC4-206ENST00000525303 FBXO46Q6PJ61 603 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-206ENST00000525303 HELBQ8NG08 1087 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-206ENST00000525303 CFHR5Q9BXR6 569 aa12.19□□□□□ -0.46
TRAPPC4-206ENST00000525303 PCDHAC2Q9Y5I4 1007 aa12.19□□□□□ -0.46
TRAPPC4-206ENST00000525303 IL16Q14005 1332 aa12.18□□□□□ -0.46
TRAPPC4-206ENST00000525303 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
TRAPPC4-206ENST00000525303 F8W031 263 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-206ENST00000525303 FOXO4P98177 505 aa12.18□□□□□ -0.46
TRAPPC4-206ENST00000525303 PRPF38BQ5VTL8 546 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-206ENST00000525303 SLC10A4Q96EP9 437 aa12.18□□□□□ -0.46
TRAPPC4-206ENST00000525303 CHMP3Q9Y3E7 222 aa12.18□□□□□ -0.46
TRAPPC4-206ENST00000525303 AK9Q5TCS8 1911 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 CLRN2A0PK11 232 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 MANSC4A6NHS7 340 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 ALDH1A1P00352 501 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 IFIT5Q13325 482 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 MAP3K11Q16584 847 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 CFAP100Q494V2 611 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 C15orf52Q6ZUT6 534 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 ZNF804AQ7Z570 1209 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 MIER1Q8N108 512 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 MTMR14Q8NCE2 650 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 CLMNQ96JQ2 1002 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 JAG2Q9Y219 1238 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 PPP2R3BQ9Y5P8 575 aa12.17□□□□□ -0.46
TRAPPC4-206ENST00000525303 F6X3S4 739 aa12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 MYO1BO43795 1136 aa12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 PPP1R12BO60237 982 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 VAMP4O75379 141 aa12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 ZBTB48P10074 688 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 IL1R1P14778 569 aa12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 INHBEP58166 350 aa12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 IFNL1Q8IU54 200 aa12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 WNK4Q96J92 1243 aa12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 PRMT6Q96LA8 375 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 VEZTQ9HBM0 779 aa12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 PCDH10Q9P2E7 1040 aa12.16□□□□□ -0.46
TRAPPC4-206ENST00000525303 AOX1Q06278 1338 aa12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 IGF2BP3O00425 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 PLIN1O60240 522 aa12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 SUPT20HL1Q3ZLR7 823 aa12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 BEND3Q5T5X7 828 aa12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 NBPF12Q5TAG4 269 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 LMBR1LQ6UX01 489 aa12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 ZNF594Q96JF6 807 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-206ENST00000525303 ZSWIM8A7E2V4 1837 aa12.14□□□□□ -0.47
TRAPPC4-206ENST00000525303 FKBP1AP62942 108 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-206ENST00000525303 EXOSC9Q06265 439 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-206ENST00000525303 CCDC57Q2TAC2 916 aa12.14□□□□□ -0.47
TRAPPC4-206ENST00000525303 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-206ENST00000525303 TAF7LQ5H9L4 462 aa12.14□□□□□ -0.47
TRAPPC4-206ENST00000525303 EPHA10Q5JZY3 1008 aa12.14□□□□□ -0.47
TRAPPC4-206ENST00000525303 CNNM1Q9NRU3 951 aa12.14□□□□□ -0.47
TRAPPC4-206ENST00000525303 TRIM17Q9Y577 477 aa12.14□□□□□ -0.47
TRAPPC4-206ENST00000525303 UNCXA6NJT0 531 aa12.13□□□□□ -0.47
TRAPPC4-206ENST00000525303 GRM8O00222 908 aa12.13□□□□□ -0.47
TRAPPC4-206ENST00000525303 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-206ENST00000525303 IREB2P48200 963 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-206ENST00000525303 RASA3Q14644 834 aa12.13□□□□□ -0.47
TRAPPC4-206ENST00000525303 LDHAL6AQ6ZMR3 332 aa12.13□□□□□ -0.47
TRAPPC4-206ENST00000525303 OTOP1Q7RTM1 612 aa12.13□□□□□ -0.47
TRAPPC4-206ENST00000525303 FAM9BQ8IZU0 186 aa12.13□□□□□ -0.47
TRAPPC4-206ENST00000525303 GJA5P36382 358 aa12.12□□□□□ -0.47
TRAPPC4-206ENST00000525303 CRHR2Q13324 411 aa12.12□□□□□ -0.47
TRAPPC4-206ENST00000525303 MFSD14BQ5SR56 506 aa12.12□□□□□ -0.47
TRAPPC4-206ENST00000525303 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
TRAPPC4-206ENST00000525303 ANKRD13AQ8IZ07 590 aa12.12□□□□□ -0.47
TRAPPC4-206ENST00000525303 TTF2Q9UNY4 1162 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-206ENST00000525303 FAM205AQ6ZU69 1335 aa12.11□□□□□ -0.47
TRAPPC4-206ENST00000525303 GYG1P46976 350 aa12.11□□□□□ -0.47
TRAPPC4-206ENST00000525303 TNFAIP1Q13829 316 aa12.11□□□□□ -0.47
TRAPPC4-206ENST00000525303 CD99L2Q8TCZ2 262 aa12.11□□□□□ -0.47
TRAPPC4-206ENST00000525303 ERO1AQ96HE7 468 aa12.11□□□□□ -0.47
TRAPPC4-206ENST00000525303 TDRD3Q9H7E2 651 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-206ENST00000525303 C9orf78Q9NZ63 289 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-206ENST00000525303 POTEFA5A3E0 1075 aa12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 TDRD7Q8NHU6 1098 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 OPTNQ96CV9 577 aa12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 PTPN18Q99952 460 aa12.1□□□□□ -0.47
TRAPPC4-206ENST00000525303 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms