RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 ASAP3Q8TDY4 903 aa10.05□□□□□ -0.8
COPB1-203ENST00000525214 SLC7A3Q8WY07 619 aa10.05□□□□□ -0.8
COPB1-203ENST00000525214 TCF12Q99081 682 aa10.05□□□□□ -0.8
COPB1-203ENST00000525214 RBCK1Q9BYM8 510 aa10.05□□□□□ -0.8
COPB1-203ENST00000525214 CCNJLQ8IV13 435 aa10.04□□□□□ -0.8
COPB1-203ENST00000525214 UBL7Q96S82 380 aaPredicted RBP10.04□□□□□ -0.8
COPB1-203ENST00000525214 CPNE3O75131 537 aaKnown RBP10.03□□□□□ -0.8
COPB1-203ENST00000525214 GLB1P16278 677 aa10.03□□□□□ -0.8
COPB1-203ENST00000525214 DUOXA2Q1HG44 320 aa10.03□□□□□ -0.8
COPB1-203ENST00000525214 NIF3L1Q9GZT8 377 aa10.03□□□□□ -0.8
COPB1-203ENST00000525214 EIF1AYO14602 144 aaKnown RBP10.02□□□□□ -0.81
COPB1-203ENST00000525214 GRIA4P48058 902 aa10.02□□□□□ -0.81
COPB1-203ENST00000525214 NLRP12P59046 1061 aa10.02□□□□□ -0.81
COPB1-203ENST00000525214 IKBKEQ14164 716 aa10.02□□□□□ -0.81
COPB1-203ENST00000525214 LIN7BQ9HAP6 207 aa10.02□□□□□ -0.81
COPB1-203ENST00000525214 NPHS2Q9NP85 383 aa10.02□□□□□ -0.81
COPB1-203ENST00000525214 NEFLP07196 543 aa10.01□□□□□ -0.81
COPB1-203ENST00000525214 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
COPB1-203ENST00000525214 C19orf57Q0VDD7 668 aa10.01□□□□□ -0.81
COPB1-203ENST00000525214 KIAA0319Q5VV43 1072 aa10.01□□□□□ -0.81
COPB1-203ENST00000525214 PRR23CQ6ZRP0 262 aa10.01□□□□□ -0.81
COPB1-203ENST00000525214 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
COPB1-203ENST00000525214 ALKBH8Q96BT7 664 aaKnown RBP10.01□□□□□ -0.81
COPB1-203ENST00000525214 BIN2Q9UBW5 565 aaPredicted RBP10.01□□□□□ -0.81
COPB1-203ENST00000525214 SPRED3Q2MJR0 410 aa10□□□□□ -0.81
COPB1-203ENST00000525214 TMC7Q7Z402 723 aa10□□□□□ -0.81
COPB1-203ENST00000525214 DMRTB1Q96MA1 342 aa10□□□□□ -0.81
COPB1-203ENST00000525214 A0A096LPE4 126 aa9.99□□□□□ -0.81
COPB1-203ENST00000525214 A0A1W2PPZ6 126 aa9.99□□□□□ -0.81
COPB1-203ENST00000525214 ARMC10Q8N2F6 343 aa9.99□□□□□ -0.81
COPB1-203ENST00000525214 CCDC74AQ96AQ1 378 aa9.99□□□□□ -0.81
COPB1-203ENST00000525214 DNAJC25Q9H1X3 360 aa9.99□□□□□ -0.81
COPB1-203ENST00000525214 SOX17Q9H6I2 414 aaPredicted RBP9.99□□□□□ -0.81
COPB1-203ENST00000525214 DCTN4Q9UJW0 460 aa9.99□□□□□ -0.81
COPB1-203ENST00000525214 IVNS1ABPQ9Y6Y0 642 aa9.99□□□□□ -0.81
COPB1-203ENST00000525214 ARL4DP49703 201 aa9.98□□□□□ -0.81
COPB1-203ENST00000525214 ZMYM1Q5SVZ6 1142 aa9.98□□□□□ -0.81
COPB1-203ENST00000525214 CSRNP1Q96S65 589 aa9.98□□□□□ -0.81
COPB1-203ENST00000525214 FAM46AQ96IP4 442 aaKnown RBP9.97□□□□□ -0.81
COPB1-203ENST00000525214 TRAIPQ9BWF2 469 aa9.97□□□□□ -0.81
COPB1-203ENST00000525214 CEP41Q9BYV8 373 aa9.97□□□□□ -0.81
COPB1-203ENST00000525214 KCNA1Q09470 495 aa9.96□□□□□ -0.82
COPB1-203ENST00000525214 ZNF423Q2M1K9 1284 aa9.96□□□□□ -0.82
COPB1-203ENST00000525214 Q8N3U1 123 aa9.96□□□□□ -0.82
COPB1-203ENST00000525214 NRSN2Q9GZP1 204 aa9.96□□□□□ -0.82
COPB1-203ENST00000525214 CLEC4MQ9H2X3 399 aaPredicted RBP9.96□□□□□ -0.82
COPB1-203ENST00000525214 LOC100289279A0A1B0GTE1 492 aa9.95□□□□□ -0.82
COPB1-203ENST00000525214 DLGAP3O95886 979 aa9.95□□□□□ -0.82
COPB1-203ENST00000525214 PCDH1Q08174 1060 aa9.95□□□□□ -0.82
COPB1-203ENST00000525214 DSC3Q14574 896 aa9.95□□□□□ -0.82
COPB1-203ENST00000525214 RUSC1Q9BVN2 902 aa9.95□□□□□ -0.82
COPB1-203ENST00000525214 RNF208Q9H0X6 261 aa9.95□□□□□ -0.82
COPB1-203ENST00000525214 EHD4Q9H223 541 aa9.95□□□□□ -0.82
COPB1-203ENST00000525214 ITPKAP23677 461 aa9.94□□□□□ -0.82
COPB1-203ENST00000525214 PREPP48147 710 aa9.94□□□□□ -0.82
COPB1-203ENST00000525214 EPS8L3Q8TE67 593 aaKnown RBP9.94□□□□□ -0.82
COPB1-203ENST00000525214 USP26Q9BXU7 913 aa9.94□□□□□ -0.82
COPB1-203ENST00000525214 ABCB6Q9NP58 842 aa9.94□□□□□ -0.82
COPB1-203ENST00000525214 MAPK1P28482 360 aa9.93□□□□□ -0.82
COPB1-203ENST00000525214 GSTM4Q03013 218 aa9.93□□□□□ -0.82
COPB1-203ENST00000525214 UVSSAQ2YD98 709 aa9.93□□□□□ -0.82
COPB1-203ENST00000525214 PRPF40BQ6NWY9 871 aaKnown RBP9.93□□□□□ -0.82
COPB1-203ENST00000525214 GLIS3Q8NEA6 775 aa9.93□□□□□ -0.82
COPB1-203ENST00000525214 ZNF576Q9H609 170 aa9.93□□□□□ -0.82
COPB1-203ENST00000525214 MEGF11A6BM72 1044 aa9.92□□□□□ -0.82
COPB1-203ENST00000525214 TREHO43280 583 aa9.92□□□□□ -0.82
COPB1-203ENST00000525214 GRM2Q14416 872 aa9.92□□□□□ -0.82
COPB1-203ENST00000525214 XP32Q5T750 250 aa9.92□□□□□ -0.82
COPB1-203ENST00000525214 ANKRD34AQ69YU3 496 aa9.92□□□□□ -0.82
COPB1-203ENST00000525214 PI16Q6UXB8 463 aa9.92□□□□□ -0.82
COPB1-203ENST00000525214 UTP4Q969X6 686 aaKnown RBP9.92□□□□□ -0.82
COPB1-203ENST00000525214 MYRFLQ96LU7 910 aa9.92□□□□□ -0.82
COPB1-203ENST00000525214 TMPRSS13Q9BYE2 586 aa9.92□□□□□ -0.82
COPB1-203ENST00000525214 RAXQ9Y2V3 346 aa9.92□□□□□ -0.82
COPB1-203ENST00000525214 FSTP19883 344 aa9.91□□□□□ -0.82
COPB1-203ENST00000525214 DHX15O43143 795 aaKnown RBP9.9□□□□□ -0.82
COPB1-203ENST00000525214 GADD45BO75293 160 aaPredicted RBP9.9□□□□□ -0.82
COPB1-203ENST00000525214 B3GALT4O96024 378 aa9.9□□□□□ -0.82
COPB1-203ENST00000525214 CTSBP07858 339 aa9.9□□□□□ -0.82
COPB1-203ENST00000525214 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.9□□□□□ -0.82
COPB1-203ENST00000525214 TMEM238LA0A1B0GVL6 79 aa9.89□□□□□ -0.83
COPB1-203ENST00000525214 PTPN12Q05209 780 aaKnown RBP9.89□□□□□ -0.83
COPB1-203ENST00000525214 TRIM56Q9BRZ2 755 aaKnown RBP9.89□□□□□ -0.83
COPB1-203ENST00000525214 SUGCTQ9HAC7 445 aa9.89□□□□□ -0.83
COPB1-203ENST00000525214 PNMA6FA0A0J9YX94 578 aa9.88□□□□□ -0.83
COPB1-203ENST00000525214 TIAF1O95411 115 aa9.88□□□□□ -0.83
COPB1-203ENST00000525214 ENOX2Q16206 610 aaKnown RBP9.88□□□□□ -0.83
COPB1-203ENST00000525214 FDX2Q6P4F2 183 aa9.88□□□□□ -0.83
COPB1-203ENST00000525214 FAM20CQ8IXL6 584 aa9.88□□□□□ -0.83
COPB1-203ENST00000525214 SMG8Q8ND04 991 aaKnown RBP9.88□□□□□ -0.83
COPB1-203ENST00000525214 ECEL1O95672 775 aa9.87□□□□□ -0.83
COPB1-203ENST00000525214 PLCB3Q01970 1234 aa9.87□□□□□ -0.83
COPB1-203ENST00000525214 NUTM2GQ5VZR2 741 aa9.87□□□□□ -0.83
COPB1-203ENST00000525214 C7orf69Q9H7B7 122 aa9.87□□□□□ -0.83
COPB1-203ENST00000525214 STOML1Q9UBI4 398 aa9.87□□□□□ -0.83
COPB1-203ENST00000525214 SART1O43290 800 aaKnown RBP9.86□□□□□ -0.83
COPB1-203ENST00000525214 BMP3P12645 472 aa9.86□□□□□ -0.83
COPB1-203ENST00000525214 MAOBP27338 520 aa9.86□□□□□ -0.83
COPB1-203ENST00000525214 FMR1Q06787 632 aaKnown RBP eCLIP9.86□□□□□ -0.83
COPB1-203ENST00000525214 FAAP100Q0VG06 881 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms