RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CHD4Q14839 1912 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 ZNF804BA4D1E1 1349 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 XDHP47989 1333 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 MROH5Q6ZUA9 1318 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 ATP2B4P23634 1241 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 CLCN6P51797 869 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 OS9Q13438 667 aaPredicted RBP8.02□□□□□ -1.13
CD44-214ENST00000525211 GRIK5Q16478 980 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 ATP2B3Q16720 1220 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 ANKRD45Q5TZF3 282 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 PI16Q6UXB8 463 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 XAGE2Q96GT9 111 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 PSMD1Q99460 953 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 LNPKQ9C0E8 428 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 CHMP4BQ9H444 224 aaKnown RBP8.02□□□□□ -1.13
CD44-214ENST00000525211 GTF3C3Q9Y5Q9 886 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 SALL3Q9BXA9 1300 aa8.02□□□□□ -1.13
CD44-214ENST00000525211 SCN9AQ15858 1988 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 SBF1O95248 1867 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 SHTN1A0MZ66 631 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 PPIP5K2O43314 1243 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 HMMRO75330 724 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 CHGBP05060 677 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 NEFLP07196 543 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 IARSP41252 1262 aaKnown RBP8.01□□□□□ -1.13
CD44-214ENST00000525211 ATN1P54259 1190 aaPredicted RBP8.01□□□□□ -1.13
CD44-214ENST00000525211 KIAA2012Q0VF49 1180 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 UBE4AQ14139 1066 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 C9orf131Q5VYM1 1079 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 TMC4Q7Z404 712 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 FBXO33Q7Z6M2 555 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 AACSQ86V21 672 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 RTKN2Q8IZC4 609 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 EDC3Q96F86 508 aaKnown RBP8.01□□□□□ -1.13
CD44-214ENST00000525211 ANKRD2Q9GZV1 360 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 TAOK3Q9H2K8 898 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 RWDD1Q9H446 243 aaPredicted RBP8.01□□□□□ -1.13
CD44-214ENST00000525211 PPP4R2Q9NY27 417 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 ZNF541Q9H0D2 1346 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 LTBP3Q9NS15 1303 aa8.01□□□□□ -1.13
CD44-214ENST00000525211 CCDC88AQ3V6T2 1871 aa8□□□□□ -1.13
CD44-214ENST00000525211 RAB11FIP3O75154 756 aa8□□□□□ -1.13
CD44-214ENST00000525211 NUCB1Q02818 461 aa8□□□□□ -1.13
CD44-214ENST00000525211 AAMPQ13685 434 aa8□□□□□ -1.13
CD44-214ENST00000525211 PUM3Q15397 648 aaKnown RBP8□□□□□ -1.13
CD44-214ENST00000525211 E2F4Q16254 413 aa8□□□□□ -1.13
CD44-214ENST00000525211 WASHC4Q2M389 1173 aa8□□□□□ -1.13
CD44-214ENST00000525211 SLFNL1Q499Z3 407 aa8□□□□□ -1.13
CD44-214ENST00000525211 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
CD44-214ENST00000525211 C15orf52Q6ZUT6 534 aaKnown RBP8□□□□□ -1.13
CD44-214ENST00000525211 LPIN2Q92539 896 aa8□□□□□ -1.13
CD44-214ENST00000525211 KIF1BPQ96EK5 621 aa8□□□□□ -1.13
CD44-214ENST00000525211 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
CD44-214ENST00000525211 LARP6Q9BRS8 491 aaKnown RBP8□□□□□ -1.13
CD44-214ENST00000525211 LRRCC1Q9C099 1032 aa8□□□□□ -1.13
CD44-214ENST00000525211 CD209Q9NNX6 404 aa8□□□□□ -1.13
CD44-214ENST00000525211 SNRKQ9NRH2 765 aa8□□□□□ -1.13
CD44-214ENST00000525211 RNF181Q9P0P0 153 aa8□□□□□ -1.13
CD44-214ENST00000525211 LEMD3Q9Y2U8 911 aa8□□□□□ -1.13
CD44-214ENST00000525211 ZNF646O15015 1829 aaPredicted RBP8□□□□□ -1.13
CD44-214ENST00000525211 MED23Q9ULK4 1368 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 ATMINO43313 823 aaPredicted RBP7.99□□□□□ -1.13
CD44-214ENST00000525211 ECE2O60344 883 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 RAD17O75943 681 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 KCNJ4P48050 445 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 CCDC102BQ68D86 513 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 DPY19L2Q6NUT2 758 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 CHD1LQ86WJ1 897 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 LARGE2Q8N3Y3 721 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 CERS5Q8N5B7 392 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 TDRD7Q8NHU6 1098 aaKnown RBP7.99□□□□□ -1.13
CD44-214ENST00000525211 CCDC136Q96JN2 1154 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 CRISPLD2Q9H0B8 497 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 GPR108Q9NPR9 543 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 PCDHAC2Q9Y5I4 1007 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 AOX1Q06278 1338 aa7.99□□□□□ -1.13
CD44-214ENST00000525211 ARAP2Q8WZ64 1704 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 MAP4K4O95819 1239 aaPredicted RBP7.98□□□□□ -1.13
CD44-214ENST00000525211 SLC5A1P13866 664 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 LMNB1P20700 586 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 HIBADHP31937 336 aaKnown RBP7.98□□□□□ -1.13
CD44-214ENST00000525211 MCAMP43121 646 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 CXCL9Q07325 125 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 RASGRF1Q13972 1273 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 TBC1D9Q6ZT07 1266 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 PLEKHM2Q8IWE5 1019 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 PI4K2BQ8TCG2 481 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 ZNF384Q8TF68 577 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 GCC1Q96CN9 775 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 ZC3H12CQ9C0D7 883 aaKnown RBP7.98□□□□□ -1.13
CD44-214ENST00000525211 ANTXR1Q9H6X2 564 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 PIH1D3Q9NQM4 214 aaKnown RBP7.98□□□□□ -1.13
CD44-214ENST00000525211 HMG20BQ9P0W2 317 aa7.98□□□□□ -1.13
CD44-214ENST00000525211 FZD9O00144 591 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 PSMD14O00487 310 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 GRIN3BO60391 1043 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 DDNO94850 711 aaPredicted RBP7.97□□□□□ -1.13
CD44-214ENST00000525211 IFIT1P09914 478 aaKnown RBP7.97□□□□□ -1.13
CD44-214ENST00000525211 IL1R1P14778 569 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 ZAP70P43403 619 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms