RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 MYH3P11055 1940 aa10.82□□□□□ -0.68
CTNNA1-242ENST00000524292 CACNA1FO60840 1977 aa10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 SHTN1A0MZ66 631 aa10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 H7C1W4 665 aa10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 VAMP4O75379 141 aa10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 VIL1P09327 827 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 HIRAP54198 1017 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 KIF4BQ2VIQ3 1234 aa10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 SAMD7Q7Z3H4 446 aa10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 DCPSQ96C86 337 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 BEGAINQ9BUH8 593 aa10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 WBP1LQ9NX94 342 aa10.81□□□□□ -0.68
CTNNA1-242ENST00000524292 MED23Q9ULK4 1368 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 ITGA6P23229 1130 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 ARSIQ5FYB1 569 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 RSBN1LQ6PCB5 846 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 KRT26Q7Z3Y9 468 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 PODNQ7Z5L7 613 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 SAPCD2Q86UD0 394 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 AGBL3Q8NEM8 1001 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 HHIPL1Q96JK4 782 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 MPHOSPH8Q99549 860 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 PLA2G12BQ9BX93 195 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 PRDM10Q9NQV6 1147 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 KCNQ5Q9NR82 932 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 MINPP1Q9UNW1 487 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 ZNF609O15014 1411 aa10.8□□□□□ -0.68
CTNNA1-242ENST00000524292 USP17L3A6NCW0 530 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 USP17L4A6NCW7 530 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 CCT4P50991 539 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 FAM161AQ3B820 660 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 CYP4F22Q6NT55 531 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 USP17L1Q7RTZ2 530 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 USP48Q86UV5 1035 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 SULF1Q8IWU6 871 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 PTCD2Q8WV60 388 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 ANKRD2Q9GZV1 360 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 LEMD3Q9Y2U8 911 aa10.79□□□□□ -0.68
CTNNA1-242ENST00000524292 SCN9AQ15858 1988 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 THSD7BQ9C0I4 1608 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 ANKRD18BA2A2Z9 1011 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 EGFRP00533 1210 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 USP17L8P0C7I0 530 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 MAP2K2P36507 400 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 KCNJ4P48050 445 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 ZNF280AP59817 542 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 COA1Q9GZY4 146 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 GGA3Q9NZ52 723 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 SPEF2Q9C093 1822 aa10.78□□□□□ -0.68
CTNNA1-242ENST00000524292 F6X3S4 739 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 CSF1RP07333 972 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 LBX1P52954 281 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 CASP7P55210 303 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 HUNKP57058 714 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 IFIT5Q13325 482 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 OGFOD1Q8N543 542 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 C2orf69Q8N8R5 385 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 KHSRPQ92945 711 aaKnown RBP eCLIP10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 FBXW7Q969H0 707 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 CHMP3Q9Y3E7 222 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 ZNF804BA4D1E1 1349 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 MYO3BQ8WXR4 1341 aa10.77□□□□□ -0.69
CTNNA1-242ENST00000524292 ADM5C9JUS6 153 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 GRM8O00222 908 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 CA12O43570 354 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 HSPA8P11142 646 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 NOGQ13253 232 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 TAF7LQ5H9L4 462 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 BEND3Q5T5X7 828 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 STRIP1Q5VSL9 837 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 SLC4A10Q6U841 1118 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 GBA2Q9HCG7 927 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 MYOZ2Q9NPC6 264 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 C9orf78Q9NZ63 289 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 PSME4Q14997 1843 aa10.76□□□□□ -0.69
CTNNA1-242ENST00000524292 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 AOC2O75106 756 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 MMP14P50281 582 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 BRPF1P55201 1214 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 CHRNDQ07001 517 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 SCARF1Q14162 830 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 CCDC57Q2TAC2 916 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 OXER1Q8TDS5 423 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 GMLQ99445 158 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 SRCIN1Q9C0H9 1055 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 TSHZ2Q9NRE2 1034 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 PITPNM2Q9BZ72 1349 aa10.75□□□□□ -0.69
CTNNA1-242ENST00000524292 WTIPA6NIX2 430 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-242ENST00000524292 E9PSI1 815 aa10.74□□□□□ -0.69
CTNNA1-242ENST00000524292 TBC1D12O60347 775 aa10.74□□□□□ -0.69
CTNNA1-242ENST00000524292 NUDT7P0C024 238 aa10.74□□□□□ -0.69
CTNNA1-242ENST00000524292 FOXO4P98177 505 aa10.74□□□□□ -0.69
CTNNA1-242ENST00000524292 DACT2Q5SW24 774 aa10.74□□□□□ -0.69
CTNNA1-242ENST00000524292 ANGEL2Q5VTE6 544 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-242ENST00000524292 LMBR1LQ6UX01 489 aa10.74□□□□□ -0.69
CTNNA1-242ENST00000524292 HS3ST6Q96QI5 342 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms