RNA–Protein interactions for RNA: ENST00000523770.1

TMPRSS4-215, Transcript of transmembrane serine protease 4, human

TSL 3

Gene TMPRSS4, Length 480 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPRSS4-215	ENST00000523770	GTF2A2	P52657	109 aa		13.77	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	TRIM28	Q13263	835 aa	Known RBP	13.77	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	DLGAP5	Q15398	846 aa		13.77	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	CCDC152	Q4G0S7	254 aa		13.77	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	TTLL5	Q6EMB2	1281 aa		13.77	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.77	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	RNF208	Q9H0X6	261 aa		13.77	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	PCDHAC2	Q9Y5I4	1007 aa		13.77	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	GRK4	P32298	578 aa		13.76	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	BMP8B	P34820	402 aa		13.76	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	TXNRD3	Q86VQ6	643 aa		13.76	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	ANKRD18A	Q8IVF6	992 aa		13.76	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.76	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	U2AF1L4	Q8WU68	220 aa	Known RBP	13.76	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	PLEKHF1	Q96S99	279 aa		13.76	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	GDF15	Q99988	308 aa		13.76	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	CHPF2	Q9P2E5	772 aa		13.76	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	CLRN2	A0PK11	232 aa		13.75	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	NEFM	P07197	916 aa		13.75	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	HSP90B1	P14625	803 aa	Known RBP	13.75	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	CTGF	P29279	349 aa		13.75	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	LRIT3	Q3SXY7	679 aa		13.75	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	MTMR14	Q8NCE2	650 aa		13.75	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	SRRD	Q9UH36	339 aa		13.75	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	RIPOR2	Q9Y4F9	1068 aa		13.75	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	AOX1	Q06278	1338 aa		13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	ECM2	O94769	699 aa	Predicted RBP	13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	PPP2R1A	P30153	589 aa		13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	CCT4	P50991	539 aa	Known RBP	13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	GTF2I	P78347	998 aa		13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	TRIM47	Q96LD4	638 aa		13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	VEZT	Q9HBM0	779 aa		13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	MINPP1	Q9UNW1	487 aa		13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	ZNF646	O15015	1829 aa	Predicted RBP	13.74	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	SPDYE2B	A6NHP3	402 aa		13.73	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	WDHD1	O75717	1129 aa	Predicted RBP	13.73	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	SPDYE6	P0CI01	402 aa		13.73	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	OSBP	P22059	807 aa		13.73	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	BCAM	P50895	628 aa		13.73	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	RASA3	Q14644	834 aa		13.73	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	RAET1E	Q8TD07	263 aa		13.73	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	BABAM1	Q9NWV8	329 aa		13.73	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	MYO1B	O43795	1136 aa		13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	PDE8A	O60658	829 aa		13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	SGPL1	O95470	568 aa		13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	KLRK1	P26718	216 aa		13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	PSMC4	P43686	418 aa		13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	VGLL4	Q14135	290 aa		13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	KRT24	Q2M2I5	525 aa		13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	CERS5	Q8N5B7	392 aa		13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	PRMT6	Q96LA8	375 aa	Predicted RBP	13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	ZCCHC17	Q9NP64	241 aa	Known RBP	13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	BSDC1	Q9NW68	430 aa	Predicted RBP	13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	BIN2	Q9UBW5	565 aa	Predicted RBP	13.72	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	ZSWIM8	A7E2V4	1837 aa		13.71	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	BTBD19	C9JJ37	291 aa		13.71	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	UBXN2A	P68543	259 aa		13.71	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	CFAP100	Q494V2	611 aa		13.71	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	C17orf99	Q6UX52	265 aa		13.71	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	JARID2	Q92833	1246 aa	Predicted RBP	13.71	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	UNC93B1	Q9H1C4	597 aa		13.71	□□□□□ -0.21
TMPRSS4-215	ENST00000523770	MYPN	Q86TC9	1320 aa		13.7	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	RPTOR	Q8N122	1335 aa		13.7	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	PCCA	P05165	728 aa	Predicted RBP	13.7	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	CETP	P11597	493 aa		13.7	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	HOXD10	P28358	340 aa		13.7	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	MAP3K9	P80192	1104 aa		13.7	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	CDAN1	Q8IWY9	1227 aa		13.7	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	HELB	Q8NG08	1087 aa	Predicted RBP	13.7	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	CDC5L	Q99459	802 aa	Known RBP	13.7	□□□□□ -0.22
TMPRSS4-215	ENST00000523770		F8W031	263 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	FMNL1	O95466	1100 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	HDGFL1	Q5TGJ6	251 aa		13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	TDH	Q8IZJ6	230 aa		13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	TEPSIN	Q96N21	525 aa		13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	GUCD1	Q96NT3	240 aa		13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	DBF4	Q9UBU7	674 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	CPA4	Q9UI42	421 aa		13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	LEMD3	Q9Y2U8	911 aa		13.69	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	SPDYE5	A6NIY4	337 aa		13.68	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	COL9A1	P20849	921 aa		13.68	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	PRKCZ	Q05513	592 aa		13.68	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	CSAD	Q9Y600	493 aa		13.68	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	CDH23	Q9H251	3354 aa		13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	TFRC	P02786	760 aa	Known RBP	13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	MAGEA10	P43363	369 aa	Predicted RBP	13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	TNFAIP1	Q13829	316 aa		13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	RIC3	Q7Z5B4	369 aa		13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	C7orf61	Q8IZ16	206 aa		13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	CCDC191	Q8NCU4	936 aa		13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	SLAIN1	Q8ND83	568 aa		13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	PAWR	Q96IZ0	340 aa	Known RBP	13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	GREM2	Q9H772	168 aa		13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	CD209	Q9NNX6	404 aa		13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	HYPK	Q9NX55	129 aa		13.67	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	MAPK8IP3	Q9UPT6	1336 aa		13.66	□□□□□ -0.22
TMPRSS4-215	ENST00000523770	DLG5	Q8TDM6	1919 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms