RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 TDRD7Q8NHU6 1098 aaKnown RBP11.89□□□□□ -0.51
PABPC1-222ENST00000523555 PANK1Q8TE04 598 aa11.89□□□□□ -0.51
PABPC1-222ENST00000523555 ZNF408Q9H9D4 720 aa11.89□□□□□ -0.51
PABPC1-222ENST00000523555 THSD7BQ9C0I4 1608 aa11.89□□□□□ -0.51
PABPC1-222ENST00000523555 MYO3BQ8WXR4 1341 aa11.88□□□□□ -0.51
PABPC1-222ENST00000523555 WNT10BO00744 389 aa11.88□□□□□ -0.51
PABPC1-222ENST00000523555 SRGAP3O43295 1099 aa11.88□□□□□ -0.51
PABPC1-222ENST00000523555 CELF2O95319 508 aaKnown RBP11.88□□□□□ -0.51
PABPC1-222ENST00000523555 VEGFBP49765 207 aa11.88□□□□□ -0.51
PABPC1-222ENST00000523555 MTX1Q13505 466 aa11.88□□□□□ -0.51
PABPC1-222ENST00000523555 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
PABPC1-222ENST00000523555 KRT26Q7Z3Y9 468 aa11.88□□□□□ -0.51
PABPC1-222ENST00000523555 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
PABPC1-222ENST00000523555 FAM205AQ6ZU69 1335 aa11.87□□□□□ -0.51
PABPC1-222ENST00000523555 RASSF10A6NK89 507 aa11.87□□□□□ -0.51
PABPC1-222ENST00000523555 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-222ENST00000523555 CIAO1O76071 339 aa11.87□□□□□ -0.51
PABPC1-222ENST00000523555 GNAI2P04899 355 aa11.87□□□□□ -0.51
PABPC1-222ENST00000523555 PUM3Q15397 648 aaKnown RBP11.87□□□□□ -0.51
PABPC1-222ENST00000523555 ITPRIPQ8IWB1 547 aa11.87□□□□□ -0.51
PABPC1-222ENST00000523555 FTSJ3Q8IY81 847 aaKnown RBP11.87□□□□□ -0.51
PABPC1-222ENST00000523555 DCPSQ96C86 337 aaKnown RBP11.87□□□□□ -0.51
PABPC1-222ENST00000523555 ZBED3Q96IU2 234 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-222ENST00000523555 ABT1Q9ULW3 272 aaKnown RBP11.87□□□□□ -0.51
PABPC1-222ENST00000523555 ADORA1P30542 326 aa11.86□□□□□ -0.51
PABPC1-222ENST00000523555 CHAF1AQ13111 956 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-222ENST00000523555 PRAMEF18Q5VWM3 479 aa11.86□□□□□ -0.51
PABPC1-222ENST00000523555 TLL2Q9Y6L7 1015 aa11.86□□□□□ -0.51
PABPC1-222ENST00000523555 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
PABPC1-222ENST00000523555 IL15P40933 162 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-222ENST00000523555 FKBP1AP62942 108 aaKnown RBP11.85□□□□□ -0.51
PABPC1-222ENST00000523555 ATP2B3Q16720 1220 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 DEFB115Q30KQ5 88 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 MFSD14BQ5SR56 506 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 CYP4F22Q6NT55 531 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 SAPCD2Q86UD0 394 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 OGFOD1Q8N543 542 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 LPIN2Q92539 896 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 CDCA5Q96FF9 252 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 RCAN3Q9UKA8 241 aa11.85□□□□□ -0.51
PABPC1-222ENST00000523555 IFIT1P09914 478 aaKnown RBP11.84□□□□□ -0.51
PABPC1-222ENST00000523555 SLC5A1P13866 664 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 PHKA1P46020 1223 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 TIMM10P62072 90 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 TFCP2Q12800 502 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 POLA2Q14181 598 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 CFAP100Q494V2 611 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 CAVIN4Q5BKX8 364 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 C20orf194Q5TEA3 1177 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 VPS37DQ86XT2 251 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 SULF1Q8IWU6 871 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 PRMT6Q96LA8 375 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-222ENST00000523555 CEP126Q9P2H0 1117 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 HDAC9Q9UKV0 1011 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 HDAC5Q9UQL6 1122 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 PAPPA2Q9BXP8 1791 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 MYH2Q9UKX2 1941 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 PITPNM2Q9BZ72 1349 aa11.84□□□□□ -0.51
PABPC1-222ENST00000523555 WDR33Q9C0J8 1336 aaKnown RBP11.84□□□□□ -0.51
PABPC1-222ENST00000523555 CLRN2A0PK11 232 aa11.83□□□□□ -0.52
PABPC1-222ENST00000523555 HSPA1AP0DMV8 641 aaKnown RBP11.83□□□□□ -0.52
PABPC1-222ENST00000523555 HSPA1BP0DMV9 641 aaKnown RBP11.83□□□□□ -0.52
PABPC1-222ENST00000523555 ATP8B2P98198 1209 aa11.83□□□□□ -0.52
PABPC1-222ENST00000523555 GRM1Q13255 1194 aa11.83□□□□□ -0.52
PABPC1-222ENST00000523555 MOB2Q70IA6 237 aa11.83□□□□□ -0.52
PABPC1-222ENST00000523555 TTF2Q9UNY4 1162 aaKnown RBP11.83□□□□□ -0.52
PABPC1-222ENST00000523555 COG6Q9Y2V7 657 aa11.83□□□□□ -0.52
PABPC1-222ENST00000523555 AKAP11Q9UKA4 1901 aa11.83□□□□□ -0.52
PABPC1-222ENST00000523555 OTOFQ9HC10 1997 aa11.83□□□□□ -0.52
PABPC1-222ENST00000523555 A0A1B0GUL7 405 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 AOC2O75106 756 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 DLGAP5Q15398 846 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
PABPC1-222ENST00000523555 MTMR14Q8NCE2 650 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 CAPNS2Q96L46 248 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 YTHDC1Q96MU7 727 aaKnown RBP11.82□□□□□ -0.52
PABPC1-222ENST00000523555 ZIC5Q96T25 663 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 GBA2Q9HCG7 927 aaPredicted RBP11.82□□□□□ -0.52
PABPC1-222ENST00000523555 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 SSC5DA1L4H1 1573 aa11.82□□□□□ -0.52
PABPC1-222ENST00000523555 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-222ENST00000523555 HUNKP57058 714 aa11.81□□□□□ -0.52
PABPC1-222ENST00000523555 MVPQ14764 893 aaKnown RBP11.81□□□□□ -0.52
PABPC1-222ENST00000523555 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
PABPC1-222ENST00000523555 CEP85Q6P2H3 762 aa11.81□□□□□ -0.52
PABPC1-222ENST00000523555 CRKP46108 304 aa11.8□□□□□ -0.52
PABPC1-222ENST00000523555 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
PABPC1-222ENST00000523555 CDAN1Q8IWY9 1227 aa11.8□□□□□ -0.52
PABPC1-222ENST00000523555 XAGE2Q96GT9 111 aa11.8□□□□□ -0.52
PABPC1-222ENST00000523555 TDRD3Q9H7E2 651 aaKnown RBP11.8□□□□□ -0.52
PABPC1-222ENST00000523555 FAM155AB1AL88 458 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-222ENST00000523555 PRDX5P30044 214 aa11.79□□□□□ -0.52
PABPC1-222ENST00000523555 MMP14P50281 582 aa11.79□□□□□ -0.52
PABPC1-222ENST00000523555 G3BP1Q13283 466 aaKnown RBP eCLIP11.79□□□□□ -0.524e-13■□□□□ 10.9
PABPC1-222ENST00000523555 RASGRF1Q13972 1273 aa11.79□□□□□ -0.52
PABPC1-222ENST00000523555 PI16Q6UXB8 463 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms