RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 GBA2Q9HCG7 927 aaPredicted RBP21.55■■□□□ 1.04
CCNC-213ENST00000523541 FAM205AQ6ZU69 1335 aa21.55■■□□□ 1.04
CCNC-213ENST00000523541 EYA2O00167 538 aa21.54■■□□□ 1.04
CCNC-213ENST00000523541 BCAR3O75815 825 aa21.54■■□□□ 1.04
CCNC-213ENST00000523541 TRIM27P14373 513 aa21.54■■□□□ 1.04
CCNC-213ENST00000523541 CAVIN4Q5BKX8 364 aa21.54■■□□□ 1.04
CCNC-213ENST00000523541 VGLL2Q8N8G2 317 aa21.54■■□□□ 1.04
CCNC-213ENST00000523541 MTMR14Q8NCE2 650 aa21.54■■□□□ 1.04
CCNC-213ENST00000523541 AOC2O75106 756 aa21.53■■□□□ 1.04
CCNC-213ENST00000523541 CIAO1O76071 339 aa21.53■■□□□ 1.04
CCNC-213ENST00000523541 ZKSCAN2Q63HK3 967 aa21.53■■□□□ 1.04
CCNC-213ENST00000523541 FBXO33Q7Z6M2 555 aa21.53■■□□□ 1.04
CCNC-213ENST00000523541 WBP1LQ9NX94 342 aa21.53■■□□□ 1.04
CCNC-213ENST00000523541 POLR2AP24928 1970 aaKnown RBP21.52■■□□□ 1.04
CCNC-213ENST00000523541 WNT10BO00744 389 aa21.52■■□□□ 1.04
CCNC-213ENST00000523541 VPS37DQ86XT2 251 aa21.52■■□□□ 1.04
CCNC-213ENST00000523541 FRAT1Q92837 279 aaPredicted RBP21.52■■□□□ 1.04
CCNC-213ENST00000523541 CDCA5Q96FF9 252 aa21.52■■□□□ 1.04
CCNC-213ENST00000523541 IFIT1P09914 478 aaKnown RBP21.51■■□□□ 1.03
CCNC-213ENST00000523541 MAP2K2P36507 400 aa21.51■■□□□ 1.03
CCNC-213ENST00000523541 PUM3Q15397 648 aaKnown RBP21.51■■□□□ 1.03
CCNC-213ENST00000523541 NBPF9Q3BBW0 867 aa21.51■■□□□ 1.03
CCNC-213ENST00000523541 ZBED3Q96IU2 234 aaPredicted RBP21.51■■□□□ 1.03
CCNC-213ENST00000523541 MEIS3Q99687 375 aa21.51■■□□□ 1.03
CCNC-213ENST00000523541 JAG2Q9Y219 1238 aa21.51■■□□□ 1.03
CCNC-213ENST00000523541 LRRFIP2Q9Y608 721 aaKnown RBP21.51■■□□□ 1.03
CCNC-213ENST00000523541 A0A1B0GUL6 1792 aa21.51■■□□□ 1.03
CCNC-213ENST00000523541 F8W031 263 aaPredicted RBP21.5■■□□□ 1.03
CCNC-213ENST00000523541 FGFR2P21802 821 aa21.5■■□□□ 1.03
CCNC-213ENST00000523541 FKBP1BP68106 108 aa21.5■■□□□ 1.03
CCNC-213ENST00000523541 MTX1Q13505 466 aa21.5■■□□□ 1.03
CCNC-213ENST00000523541 KLHDC4Q8TBB5 520 aa21.5■■□□□ 1.03
CCNC-213ENST00000523541 LPIN2Q92539 896 aa21.5■■□□□ 1.03
CCNC-213ENST00000523541 COPRSQ9NQ92 184 aa21.5■■□□□ 1.03
CCNC-213ENST00000523541 SCAF8Q9UPN6 1271 aaKnown RBP21.5■■□□□ 1.03
CCNC-213ENST00000523541 CAPN15O75808 1086 aa21.49■■□□□ 1.03
CCNC-213ENST00000523541 IL15P40933 162 aaPredicted RBP21.49■■□□□ 1.03
CCNC-213ENST00000523541 GYG1P46976 350 aa21.49■■□□□ 1.03
CCNC-213ENST00000523541 LBX1P52954 281 aa21.49■■□□□ 1.03
CCNC-213ENST00000523541 DLGAP5Q15398 846 aa21.49■■□□□ 1.03
CCNC-213ENST00000523541 CERS5Q8N5B7 392 aa21.49■■□□□ 1.03
CCNC-213ENST00000523541 TBC1D22AQ8WUA7 517 aa21.49■■□□□ 1.03
CCNC-213ENST00000523541 ZNF157P51786 506 aaPredicted RBP21.48■■□□□ 1.03
CCNC-213ENST00000523541 TTLL12Q14166 644 aaPredicted RBP21.48■■□□□ 1.03
CCNC-213ENST00000523541 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
CCNC-213ENST00000523541 APOBEC3FQ8IUX4 373 aaKnown RBP21.48■■□□□ 1.03
CCNC-213ENST00000523541 CEP126Q9P2H0 1117 aa21.48■■□□□ 1.03
CCNC-213ENST00000523541 ZBTB22O15209 634 aa21.47■■□□□ 1.03
CCNC-213ENST00000523541 FRAT2O75474 233 aaPredicted RBP21.47■■□□□ 1.03
CCNC-213ENST00000523541 GNAI2P04899 355 aa21.47■■□□□ 1.03
CCNC-213ENST00000523541 SLC5A1P13866 664 aa21.47■■□□□ 1.03
CCNC-213ENST00000523541 RBM5P52756 815 aaKnown RBP eCLIP21.47■■□□□ 1.03
CCNC-213ENST00000523541 NOGQ13253 232 aa21.47■■□□□ 1.03
CCNC-213ENST00000523541 RGMBQ6NW40 437 aa21.47■■□□□ 1.03
CCNC-213ENST00000523541 PRDM10Q9NQV6 1147 aa21.47■■□□□ 1.03
CCNC-213ENST00000523541 MYO1BO43795 1136 aa21.46■■□□□ 1.03
CCNC-213ENST00000523541 NF2P35240 595 aa21.46■■□□□ 1.03
CCNC-213ENST00000523541 MFSD14BQ5SR56 506 aa21.46■■□□□ 1.03
CCNC-213ENST00000523541 CCDC102AQ96A19 550 aa21.46■■□□□ 1.03
CCNC-213ENST00000523541 MRIQ9BWK5 157 aa21.46■■□□□ 1.03
CCNC-213ENST00000523541 SERPINA10Q9UK55 444 aa21.46■■□□□ 1.03
CCNC-213ENST00000523541 SUGT1Q9Y2Z0 365 aa21.46■■□□□ 1.03
CCNC-213ENST00000523541 THSD7BQ9C0I4 1608 aa21.45■■□□□ 1.02
CCNC-213ENST00000523541 HDLBPQ00341 1268 aaKnown RBP21.45■■□□□ 1.02
CCNC-213ENST00000523541 PRAMEF18Q5VWM3 479 aa21.45■■□□□ 1.02
CCNC-213ENST00000523541 ZNF646O15015 1829 aaPredicted RBP21.45■■□□□ 1.02
CCNC-213ENST00000523541 SRGAP3O43295 1099 aa21.44■■□□□ 1.02
CCNC-213ENST00000523541 HSPA8P11142 646 aaKnown RBP21.44■■□□□ 1.02
CCNC-213ENST00000523541 CLUAP1Q96AJ1 413 aa21.44■■□□□ 1.02
CCNC-213ENST00000523541 TSKSQ9UJT2 592 aa21.44■■□□□ 1.02
CCNC-213ENST00000523541 PPP2R3BQ9Y5P8 575 aa21.44■■□□□ 1.02
CCNC-213ENST00000523541 SPDYE2BA6NHP3 402 aa21.43■■□□□ 1.02
CCNC-213ENST00000523541 SPDYE6P0CI01 402 aa21.43■■□□□ 1.02
CCNC-213ENST00000523541 MS4A1P11836 297 aa21.43■■□□□ 1.02
CCNC-213ENST00000523541 BCAMP50895 628 aa21.43■■□□□ 1.02
CCNC-213ENST00000523541 CFAP100Q494V2 611 aa21.43■■□□□ 1.02
CCNC-213ENST00000523541 FTSJ3Q8IY81 847 aaKnown RBP21.43■■□□□ 1.02
CCNC-213ENST00000523541 DZIP1LQ8IYY4 767 aaKnown RBP21.43■■□□□ 1.02
CCNC-213ENST00000523541 CHAF1AQ13111 956 aaPredicted RBP21.42■■□□□ 1.02
CCNC-213ENST00000523541 TMEM57Q8N5G2 664 aa21.42■■□□□ 1.02
CCNC-213ENST00000523541 SIL1Q9H173 461 aa21.42■■□□□ 1.02
CCNC-213ENST00000523541 GNL3LQ9NVN8 582 aaKnown RBP21.42■■□□□ 1.02
CCNC-213ENST00000523541 TTF2Q9UNY4 1162 aaKnown RBP21.42■■□□□ 1.02
CCNC-213ENST00000523541 IQSEC3Q9UPP2 1182 aaPredicted RBP21.42■■□□□ 1.02
CCNC-213ENST00000523541 AKAP2Q9Y2D5 859 aa21.42■■□□□ 1.02
CCNC-213ENST00000523541 COL1A1P02452 1464 aaPredicted RBP21.41■■□□□ 1.02
CCNC-213ENST00000523541 CA12O43570 354 aa21.41■■□□□ 1.02
CCNC-213ENST00000523541 ATP2B3Q16720 1220 aa21.41■■□□□ 1.02
CCNC-213ENST00000523541 WDR66Q8TBY9 1149 aa21.41■■□□□ 1.02
CCNC-213ENST00000523541 VEZTQ9HBM0 779 aa21.41■■□□□ 1.02
CCNC-213ENST00000523541 SEMA3EO15041 775 aa21.4■■□□□ 1.02
CCNC-213ENST00000523541 PRKG1Q13976 671 aa21.4■■□□□ 1.02
CCNC-213ENST00000523541 REM2Q8IYK8 340 aaPredicted RBP21.4■■□□□ 1.02
CCNC-213ENST00000523541 PRMT6Q96LA8 375 aaPredicted RBP21.4■■□□□ 1.02
CCNC-213ENST00000523541 PAPPA2Q9BXP8 1791 aa21.39■■□□□ 1.01
CCNC-213ENST00000523541 MAST3O60307 1309 aa21.39■■□□□ 1.01
CCNC-213ENST00000523541 CLRN2A0PK11 232 aa21.39■■□□□ 1.01
CCNC-213ENST00000523541 UBE2Q2LH0YL09 131 aa21.39■■□□□ 1.01
CCNC-213ENST00000523541 MOB2Q70IA6 237 aa21.39■■□□□ 1.01
CCNC-213ENST00000523541 DEFB129Q9H1M3 183 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms