RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CERS5Q8N5B7 392 aa14.97□□□□□ -0.01
SDCBP-211ENST00000523441 C8orf58Q8NAV2 365 aa14.97□□□□□ -0.01
SDCBP-211ENST00000523441 HELBQ8NG08 1087 aaPredicted RBP14.97□□□□□ -0.01
SDCBP-211ENST00000523441 MPHOSPH8Q99549 860 aa14.97□□□□□ -0.01
SDCBP-211ENST00000523441 PTPN18Q99952 460 aa14.97□□□□□ -0.01
SDCBP-211ENST00000523441 LEMD3Q9Y2U8 911 aa14.97□□□□□ -0.01
SDCBP-211ENST00000523441 BRCA2P51587 3418 aa14.97□□□□□ -0.01
SDCBP-211ENST00000523441 LAMB1P07942 1786 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 PI4KAP2A4QPH2 592 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 H0YGN5 161 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 MYO1BO43795 1136 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 TAF5LO75529 589 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 IGKV5-2P06315 115 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 SUPT20HL1Q3ZLR7 823 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 PI4KAP1Q8N8J0 262 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 SH3TC2Q8TF17 1288 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 CNKSR2Q8WXI2 1034 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 ARMC5Q96C12 935 aa14.96□□□□□ -0.01
SDCBP-211ENST00000523441 ZBED3Q96IU2 234 aaPredicted RBP14.96□□□□□ -0.01
SDCBP-211ENST00000523441 TRIOBPQ9H2D6 2365 aa14.95□□□□□ -0.02
SDCBP-211ENST00000523441 USP2O75604 605 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-211ENST00000523441 ITGA6P23229 1130 aa14.95□□□□□ -0.02
SDCBP-211ENST00000523441 NEXNQ0ZGT2 675 aa14.95□□□□□ -0.02
SDCBP-211ENST00000523441 TAF1CQ15572 869 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-211ENST00000523441 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
SDCBP-211ENST00000523441 OPTNQ96CV9 577 aa14.95□□□□□ -0.02
SDCBP-211ENST00000523441 PRMT6Q96LA8 375 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-211ENST00000523441 ANKRD2Q9GZV1 360 aa14.95□□□□□ -0.02
SDCBP-211ENST00000523441 CD209Q9NNX6 404 aa14.95□□□□□ -0.02
SDCBP-211ENST00000523441 ADAMTS8Q9UP79 889 aa14.95□□□□□ -0.02
SDCBP-211ENST00000523441 COL1A1P02452 1464 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-211ENST00000523441 PLIN1O60240 522 aa14.94□□□□□ -0.02
SDCBP-211ENST00000523441 CHRNDQ07001 517 aa14.94□□□□□ -0.02
SDCBP-211ENST00000523441 RASA3Q14644 834 aa14.94□□□□□ -0.02
SDCBP-211ENST00000523441 RALBP1Q15311 655 aa14.94□□□□□ -0.02
SDCBP-211ENST00000523441 NBPF11Q86T75 865 aa14.94□□□□□ -0.02
SDCBP-211ENST00000523441 ZNF333Q96JL9 665 aa14.94□□□□□ -0.02
SDCBP-211ENST00000523441 CHMP3Q9Y3E7 222 aa14.94□□□□□ -0.02
SDCBP-211ENST00000523441 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
SDCBP-211ENST00000523441 CCL15-CCL14A0A0B4J2E2 113 aa14.93□□□□□ -0.02
SDCBP-211ENST00000523441 MAP3K11Q16584 847 aa14.93□□□□□ -0.02
SDCBP-211ENST00000523441 CCL15Q16663 113 aa14.93□□□□□ -0.02
SDCBP-211ENST00000523441 CCDC30Q5VVM6 783 aa14.93□□□□□ -0.02
SDCBP-211ENST00000523441 KSR2Q6VAB6 950 aa14.93□□□□□ -0.02
SDCBP-211ENST00000523441 ANKRD13AQ8IZ07 590 aa14.93□□□□□ -0.02
SDCBP-211ENST00000523441 SPDYE2BA6NHP3 402 aa14.92□□□□□ -0.02
SDCBP-211ENST00000523441 SPDYE6P0CI01 402 aa14.92□□□□□ -0.02
SDCBP-211ENST00000523441 GNAI1P63096 354 aa14.92□□□□□ -0.02
SDCBP-211ENST00000523441 CDAN1Q8IWY9 1227 aa14.92□□□□□ -0.02
SDCBP-211ENST00000523441 TSPYL6Q8N831 410 aa14.92□□□□□ -0.02
SDCBP-211ENST00000523441 DPF3Q92784 378 aa14.92□□□□□ -0.02
SDCBP-211ENST00000523441 ARHGAP39Q9C0H5 1083 aa14.92□□□□□ -0.02
SDCBP-211ENST00000523441 PPP2R3BQ9Y5P8 575 aa14.92□□□□□ -0.02
SDCBP-211ENST00000523441 NEURL1BA8MQ27 555 aa14.91□□□□□ -0.02
SDCBP-211ENST00000523441 TCP10L2B9ZVM9 353 aa14.91□□□□□ -0.02
SDCBP-211ENST00000523441 APAF1O14727 1248 aa14.91□□□□□ -0.02
SDCBP-211ENST00000523441 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
SDCBP-211ENST00000523441 G2E3Q7L622 706 aa14.91□□□□□ -0.02
SDCBP-211ENST00000523441 BRI3BPQ8WY22 251 aa14.91□□□□□ -0.02
SDCBP-211ENST00000523441 OTUD5Q96G74 571 aa14.91□□□□□ -0.02
SDCBP-211ENST00000523441 ZFYVE28Q9HCC9 887 aa14.91□□□□□ -0.02
SDCBP-211ENST00000523441 IFT57Q9NWB7 429 aa14.91□□□□□ -0.02
SDCBP-211ENST00000523441 MYBBP1AQ9BQG0 1328 aaKnown RBP14.91□□□□□ -0.02
SDCBP-211ENST00000523441 ZNF853P0CG23 659 aa14.9□□□□□ -0.02
SDCBP-211ENST00000523441 MMP14P50281 582 aa14.9□□□□□ -0.02
SDCBP-211ENST00000523441 ZNF804AQ7Z570 1209 aa14.9□□□□□ -0.02
SDCBP-211ENST00000523441 FAM43AQ8N2R8 423 aa14.9□□□□□ -0.02
SDCBP-211ENST00000523441 STK31Q9BXU1 1019 aa14.9□□□□□ -0.02
SDCBP-211ENST00000523441 TDRD3Q9H7E2 651 aaKnown RBP14.9□□□□□ -0.02
SDCBP-211ENST00000523441 SZT2Q5T011 3432 aa14.89□□□□□ -0.03
SDCBP-211ENST00000523441 ARHGEF6Q15052 776 aa14.89□□□□□ -0.03
SDCBP-211ENST00000523441 TSR2Q969E8 191 aaKnown RBP14.89□□□□□ -0.03
SDCBP-211ENST00000523441 ANKRD18BA2A2Z9 1011 aa14.88□□□□□ -0.03
SDCBP-211ENST00000523441 H7C1W4 665 aa14.88□□□□□ -0.03
SDCBP-211ENST00000523441 DLL1O00548 723 aa14.88□□□□□ -0.03
SDCBP-211ENST00000523441 VGLL4Q14135 290 aa14.88□□□□□ -0.03
SDCBP-211ENST00000523441 KIF22Q14807 665 aa14.88□□□□□ -0.03
SDCBP-211ENST00000523441 MTMR14Q8NCE2 650 aa14.88□□□□□ -0.03
SDCBP-211ENST00000523441 MS4A4AQ96JQ5 239 aa14.88□□□□□ -0.03
SDCBP-211ENST00000523441 TMEM39BQ9GZU3 492 aa14.88□□□□□ -0.03
SDCBP-211ENST00000523441 RBM27Q9P2N5 1060 aaKnown RBP14.88□□□□□ -0.03
SDCBP-211ENST00000523441 ZNF70Q9UC06 446 aaPredicted RBP14.88□□□□□ -0.03
SDCBP-211ENST00000523441 TESPA1A2RU30 521 aaPredicted RBP14.87□□□□□ -0.03
SDCBP-211ENST00000523441 GTF2A2P52657 109 aa14.87□□□□□ -0.03
SDCBP-211ENST00000523441 DDX10Q13206 875 aaKnown RBP14.87□□□□□ -0.03
SDCBP-211ENST00000523441 MTFR1Q15390 333 aa14.87□□□□□ -0.03
SDCBP-211ENST00000523441 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.87□□□□□ -0.03
SDCBP-211ENST00000523441 SLC17A8Q8NDX2 589 aa14.87□□□□□ -0.03
SDCBP-211ENST00000523441 ZNF594Q96JF6 807 aaPredicted RBP14.87□□□□□ -0.03
SDCBP-211ENST00000523441 TTF2Q9UNY4 1162 aaKnown RBP14.87□□□□□ -0.03
SDCBP-211ENST00000523441 CSADQ9Y600 493 aa14.87□□□□□ -0.03
SDCBP-211ENST00000523441 ARAP2Q8WZ64 1704 aa14.86□□□□□ -0.03
SDCBP-211ENST00000523441 WDHD1O75717 1129 aaPredicted RBP14.86□□□□□ -0.03
SDCBP-211ENST00000523441 CACNB3P54284 484 aa14.86□□□□□ -0.03
SDCBP-211ENST00000523441 CALD1Q05682 793 aaKnown RBP14.86□□□□□ -0.03
SDCBP-211ENST00000523441 GCKRQ14397 625 aa14.86□□□□□ -0.03
SDCBP-211ENST00000523441 TAF7LQ5H9L4 462 aa14.86□□□□□ -0.03
SDCBP-211ENST00000523441 SLC4A2P04920 1241 aa14.85□□□□□ -0.03
SDCBP-211ENST00000523441 MAP3K9P80192 1104 aa14.85□□□□□ -0.03
SDCBP-211ENST00000523441 TNFAIP1Q13829 316 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms