RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 KIF4AO95239 1232 aa8.32□□□□□ -1.08
SKP1-211ENST00000523359 FGD1P98174 961 aa8.32□□□□□ -1.08
SKP1-211ENST00000523359 XPCQ01831 940 aaPredicted RBP8.32□□□□□ -1.08
SKP1-211ENST00000523359 ARTNQ5T4W7 220 aa8.32□□□□□ -1.08
SKP1-211ENST00000523359 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
SKP1-211ENST00000523359 NCAPG2Q86XI2 1143 aa8.32□□□□□ -1.08
SKP1-211ENST00000523359 SPACA7Q96KW9 195 aa8.32□□□□□ -1.08
SKP1-211ENST00000523359 FAM161BQ96MY7 647 aa8.32□□□□□ -1.08
SKP1-211ENST00000523359 LACRTQ9GZZ8 138 aa8.32□□□□□ -1.08
SKP1-211ENST00000523359 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
SKP1-211ENST00000523359 ZFP64Q9NPA5 681 aa8.32□□□□□ -1.08
SKP1-211ENST00000523359 LATS2Q9NRM7 1088 aa8.32□□□□□ -1.08
SKP1-211ENST00000523359 EDN3P14138 238 aa8.31□□□□□ -1.08
SKP1-211ENST00000523359 ACPPP15309 386 aa8.31□□□□□ -1.08
SKP1-211ENST00000523359 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.31□□□□□ -1.08
SKP1-211ENST00000523359 CEP135Q66GS9 1140 aa8.31□□□□□ -1.08
SKP1-211ENST00000523359 RASSF4Q9H2L5 321 aa8.31□□□□□ -1.08
SKP1-211ENST00000523359 NLRP2Q9NX02 1062 aa8.31□□□□□ -1.08
SKP1-211ENST00000523359 PPME1Q9Y570 386 aa8.31□□□□□ -1.08
SKP1-211ENST00000523359 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
SKP1-211ENST00000523359 GADD45BO75293 160 aaPredicted RBP8.3□□□□□ -1.08
SKP1-211ENST00000523359 CDC25BP30305 580 aa8.3□□□□□ -1.08
SKP1-211ENST00000523359 PEAR1Q5VY43 1037 aaPredicted RBP8.3□□□□□ -1.08
SKP1-211ENST00000523359 TXNDC11Q6PKC3 985 aa8.3□□□□□ -1.08
SKP1-211ENST00000523359 AGGF1Q8N302 714 aaeCLIP8.3□□□□□ -1.08
SKP1-211ENST00000523359 MRRFQ96E11 262 aaKnown RBP8.3□□□□□ -1.08
SKP1-211ENST00000523359 SRA1Q9HD15 236 aaKnown RBP8.3□□□□□ -1.08
SKP1-211ENST00000523359 A0A1W2PP55 124 aa8.29□□□□□ -1.08
SKP1-211ENST00000523359 LINC01387J3KSC0 135 aa8.29□□□□□ -1.08
SKP1-211ENST00000523359 TRPA1O75762 1119 aa8.29□□□□□ -1.08
SKP1-211ENST00000523359 SMNDC1O75940 238 aaKnown RBP eCLIP8.29□□□□□ -1.08
SKP1-211ENST00000523359 DAB2P98082 770 aa8.29□□□□□ -1.08
SKP1-211ENST00000523359 ADAMTSL4Q6UY14 1074 aa8.29□□□□□ -1.08
SKP1-211ENST00000523359 PRR23CQ6ZRP0 262 aa8.29□□□□□ -1.08
SKP1-211ENST00000523359 MAP4K3Q8IVH8 894 aa8.29□□□□□ -1.08
SKP1-211ENST00000523359 DZIP1LQ8IYY4 767 aaKnown RBP8.29□□□□□ -1.08
SKP1-211ENST00000523359 MUC3BQ9H195 1237 aa8.29□□□□□ -1.08
SKP1-211ENST00000523359 GNA15P30679 374 aa8.28□□□□□ -1.08
SKP1-211ENST00000523359 PSMD2Q13200 908 aa8.28□□□□□ -1.08
SKP1-211ENST00000523359 CACTIN-AS1Q8N1I8 211 aa8.28□□□□□ -1.08
SKP1-211ENST00000523359 TMEM130Q8N3G9 435 aa8.28□□□□□ -1.08
SKP1-211ENST00000523359 CEP120Q8N960 986 aa8.28□□□□□ -1.08
SKP1-211ENST00000523359 GALNT11Q8NCW6 608 aa8.28□□□□□ -1.08
SKP1-211ENST00000523359 ZKSCAN3Q9BRR0 538 aa8.28□□□□□ -1.08
SKP1-211ENST00000523359 SPG7Q9UQ90 795 aa8.28□□□□□ -1.08
SKP1-211ENST00000523359 CDC27P30260 824 aa8.27□□□□□ -1.09
SKP1-211ENST00000523359 LRP8Q14114 963 aa8.27□□□□□ -1.09
SKP1-211ENST00000523359 KIAA0319Q5VV43 1072 aa8.27□□□□□ -1.09
SKP1-211ENST00000523359 TMC4Q7Z404 712 aa8.27□□□□□ -1.09
SKP1-211ENST00000523359 DCAF11Q8TEB1 546 aa8.27□□□□□ -1.09
SKP1-211ENST00000523359 OSMRQ99650 979 aa8.27□□□□□ -1.09
SKP1-211ENST00000523359 EHD4Q9H223 541 aa8.27□□□□□ -1.09
SKP1-211ENST00000523359 KIAA1522Q9P206 1035 aaPredicted RBP8.27□□□□□ -1.09
SKP1-211ENST00000523359 SORBS3O60504 671 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 GLB1P16278 677 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 GRM2Q14416 872 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 NXPE4Q6UWF7 544 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 HHIPQ96QV1 700 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 CARD10Q9BWT7 1032 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 PBX4Q9BYU1 374 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 BCO2Q9BYV7 579 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 OSBPL7Q9BZF2 842 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 BCL11AQ9H165 835 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 LIN7BQ9HAP6 207 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 MRS2Q9HD23 443 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 SH2B1Q9NRF2 756 aaPredicted RBP8.26□□□□□ -1.09
SKP1-211ENST00000523359 DZANK1Q9NVP4 752 aa8.26□□□□□ -1.09
SKP1-211ENST00000523359 NFKBIEO00221 500 aa8.25□□□□□ -1.09
SKP1-211ENST00000523359 WISP1O95388 367 aa8.25□□□□□ -1.09
SKP1-211ENST00000523359 MRPL58Q14197 206 aaKnown RBP8.25□□□□□ -1.09
SKP1-211ENST00000523359 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.25□□□□□ -1.09
SKP1-211ENST00000523359 NBPF11Q86T75 865 aa8.25□□□□□ -1.09
SKP1-211ENST00000523359 FRMD6Q96NE9 622 aa8.25□□□□□ -1.09
SKP1-211ENST00000523359 C12orf49Q9H741 205 aa8.25□□□□□ -1.09
SKP1-211ENST00000523359 KCNK4Q9NYG8 393 aa8.25□□□□□ -1.09
SKP1-211ENST00000523359 AK5Q9Y6K8 562 aa8.25□□□□□ -1.09
SKP1-211ENST00000523359 E9PSI1 815 aa8.24□□□□□ -1.09
SKP1-211ENST00000523359 HYAL3O43820 417 aaPredicted RBP8.24□□□□□ -1.09
SKP1-211ENST00000523359 EPHA1P21709 976 aa8.24□□□□□ -1.09
SKP1-211ENST00000523359 EIF4BP23588 611 aaKnown RBP8.24□□□□□ -1.09
SKP1-211ENST00000523359 CD68P34810 354 aaPredicted RBP8.24□□□□□ -1.09
SKP1-211ENST00000523359 Q6ZS46 218 aa8.24□□□□□ -1.09
SKP1-211ENST00000523359 GLIS3Q8NEA6 775 aa8.24□□□□□ -1.09
SKP1-211ENST00000523359 VTI1BQ9UEU0 232 aa8.24□□□□□ -1.09
SKP1-211ENST00000523359 GIPC1O14908 333 aa8.23□□□□□ -1.09
SKP1-211ENST00000523359 ACAD11Q709F0 780 aa8.23□□□□□ -1.09
SKP1-211ENST00000523359 TMEM102Q8N9M5 508 aaPredicted RBP8.23□□□□□ -1.09
SKP1-211ENST00000523359 TCF12Q99081 682 aa8.23□□□□□ -1.09
SKP1-211ENST00000523359 POP1Q99575 1024 aaKnown RBP8.23□□□□□ -1.09
SKP1-211ENST00000523359 METTL12A8MUP2 240 aa8.22□□□□□ -1.09
SKP1-211ENST00000523359 FSCN2O14926 492 aa8.22□□□□□ -1.09
SKP1-211ENST00000523359 PTPRAP18433 802 aa8.22□□□□□ -1.09
SKP1-211ENST00000523359 FSTP19883 344 aa8.22□□□□□ -1.09
SKP1-211ENST00000523359 FAM117BQ6P1L5 589 aa8.22□□□□□ -1.09
SKP1-211ENST00000523359 NXPE3Q969Y0 559 aa8.22□□□□□ -1.09
SKP1-211ENST00000523359 UBL7Q96S82 380 aaPredicted RBP8.22□□□□□ -1.09
SKP1-211ENST00000523359 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
SKP1-211ENST00000523359 TRAK1Q9UPV9 953 aa8.22□□□□□ -1.09
SKP1-211ENST00000523359 PDE2AO00408 941 aaPredicted RBP8.21□□□□□ -1.1
SKP1-211ENST00000523359 TM4SF5O14894 197 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms