RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 KIF13BQ9NQT8 1826 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 TNRC18O15417 2968 aaPredicted RBP5.25□□□□□ -1.57
NPM1-210ENST00000523339 ZNF541Q9H0D2 1346 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 LTBP3Q9NS15 1303 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 KIAA1551Q9HCM1 1747 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 SLC24A1O60721 1099 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 TRPA1O75762 1119 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 NR5A1Q13285 461 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 CTU1Q7Z7A3 348 aaKnown RBP5.24□□□□□ -1.57
NPM1-210ENST00000523339 CNBD1Q8NA66 436 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 SLC4A9Q96Q91 983 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 BRIP1Q9BX63 1249 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 C1QTNF2Q9BXJ5 285 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 CARD11Q9BXL7 1154 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 TMX4Q9H1E5 349 aaPredicted RBP5.24□□□□□ -1.57
NPM1-210ENST00000523339 ZBTB3Q9H5J0 574 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 NARFQ9UHQ1 456 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 INSRP06213 1382 aa5.24□□□□□ -1.57
NPM1-210ENST00000523339 A0A087WZG4 1122 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 FIGNL2A6NMB9 653 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 CANXP27824 592 aaKnown RBP5.23□□□□□ -1.57
NPM1-210ENST00000523339 HUNKP57058 714 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 FKBP4Q02790 459 aaKnown RBP eCLIP5.23□□□□□ -1.573e-6■■□□□ 11.6
NPM1-210ENST00000523339 FMR1Q06787 632 aaKnown RBP eCLIP5.23□□□□□ -1.57
NPM1-210ENST00000523339 CBLBQ13191 982 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 AGERQ15109 404 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 PLEKHO1Q53GL0 409 aaPredicted RBP5.23□□□□□ -1.57
NPM1-210ENST00000523339 STYK1Q6J9G0 422 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 ZNF530Q6P9A1 599 aaPredicted RBP5.23□□□□□ -1.57
NPM1-210ENST00000523339 USP50Q70EL3 339 aaPredicted RBP5.23□□□□□ -1.57
NPM1-210ENST00000523339 SAPCD2Q86UD0 394 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 RTKN2Q8IZC4 609 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 MASTLQ96GX5 879 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 SETDB2Q96T68 719 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 KDRP35968 1356 aa5.23□□□□□ -1.57
NPM1-210ENST00000523339 COL15A1P39059 1388 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 MAN1A2O60476 641 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 BMP2P12643 396 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 GTF2E1P29083 439 aaPredicted RBP5.22□□□□□ -1.57
NPM1-210ENST00000523339 IARSP41252 1262 aaKnown RBP5.22□□□□□ -1.57
NPM1-210ENST00000523339 NEUROD1Q13562 356 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 CST9Q5W186 159 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 SH3BP5LQ7L8J4 393 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 DNAJC10Q8IXB1 793 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 SYNE4Q8N205 404 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 MEIOBQ8N635 442 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 NFATC2IPQ8NCF5 419 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 TSC1Q92574 1164 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 SAGE1Q9NXZ1 904 aa5.22□□□□□ -1.57
NPM1-210ENST00000523339 CARMIL3Q8ND23 1372 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 MON2Q7Z3U7 1717 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 FAM181BA6NEQ2 426 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 TNNT2P45379 298 aaPredicted RBP5.21□□□□□ -1.58
NPM1-210ENST00000523339 FXR1P51114 621 aaKnown RBP eCLIP5.21□□□□□ -1.58
NPM1-210ENST00000523339 ZNF157P51786 506 aaPredicted RBP5.21□□□□□ -1.58
NPM1-210ENST00000523339 CTDSPL2Q05D32 466 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 PKN2Q16513 984 aaKnown RBP5.21□□□□□ -1.58
NPM1-210ENST00000523339 PRR5LQ6MZQ0 368 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 INTS5Q6P9B9 1019 aaKnown RBP5.21□□□□□ -1.58
NPM1-210ENST00000523339 BPHLQ86WA6 291 aaPredicted RBP5.21□□□□□ -1.58
NPM1-210ENST00000523339 NBPF5PQ86XG9 351 aaPredicted RBP5.21□□□□□ -1.58
NPM1-210ENST00000523339 TTC5Q8N0Z6 440 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 LINC00528Q8N1L1 170 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 LARGE2Q8N3Y3 721 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 KCTD17Q8N5Z5 321 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 C2orf69Q8N8R5 385 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 L3MBTL2Q969R5 705 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 HHIPL1Q96JK4 782 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 BCL2L13Q9BXK5 485 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 ADARB2Q9NS39 739 aaKnown RBP5.21□□□□□ -1.58
NPM1-210ENST00000523339 EMILIN1Q9Y6C2 1016 aa5.21□□□□□ -1.58
NPM1-210ENST00000523339 SOS1Q07889 1333 aaPredicted RBP5.21□□□□□ -1.58
NPM1-210ENST00000523339 BRCA1P38398 1863 aaKnown RBP5.2□□□□□ -1.58
NPM1-210ENST00000523339 KIF24Q5T7B8 1368 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 FYB1O15117 783 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 STARD3NLO95772 234 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 SRGNP10124 158 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 NPR1P16066 1061 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 EPS15P42566 896 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 KIF23Q02241 960 aaPredicted RBP5.2□□□□□ -1.58
NPM1-210ENST00000523339 PDE4DQ08499 809 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 KCNMA1Q12791 1236 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 SUZ12Q15022 739 aaKnown RBP5.2□□□□□ -1.58
NPM1-210ENST00000523339 AMOTQ4VCS5 1084 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 RNFT1Q5M7Z0 435 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 TBC1D9BQ66K14 1250 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 RGMBQ6NW40 437 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 CDC37L1Q7L3B6 337 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 NIM1KQ8IY84 436 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 WHAMMQ8TF30 809 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 CNTNAP3BQ96NU0 1288 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 OCSTAMPQ9BR26 566 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 CNTNAP3Q9BZ76 1288 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 GLIS2Q9BZE0 524 aaPredicted RBP5.2□□□□□ -1.58
NPM1-210ENST00000523339 POLR3EQ9NVU0 708 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 RNF186Q9NXI6 227 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 ZBTB1Q9Y2K1 713 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 SBF1O95248 1867 aa5.2□□□□□ -1.58
NPM1-210ENST00000523339 VIRMAQ69YN4 1812 aaKnown RBP5.19□□□□□ -1.58
NPM1-210ENST00000523339 FAM177BA6PVY3 158 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms