RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 GYG1P46976 350 aa20.32■□□□□ 0.84
CLN8-206ENST00000523237 HNRNPUQ00839 825 aaKnown RBP eCLIP20.32■□□□□ 0.84
CLN8-206ENST00000523237 TNS4Q8IZW8 715 aa20.32■□□□□ 0.84
CLN8-206ENST00000523237 KLHDC4Q8TBB5 520 aa20.32■□□□□ 0.84
CLN8-206ENST00000523237 PRDM10Q9NQV6 1147 aa20.32■□□□□ 0.84
CLN8-206ENST00000523237 PAPPA2Q9BXP8 1791 aa20.31■□□□□ 0.84
CLN8-206ENST00000523237 ARAP2Q8WZ64 1704 aa20.31■□□□□ 0.84
CLN8-206ENST00000523237 PDE8BO95263 885 aa20.31■□□□□ 0.84
CLN8-206ENST00000523237 RGMBQ6NW40 437 aa20.31■□□□□ 0.84
CLN8-206ENST00000523237 TDRD7Q8NHU6 1098 aaKnown RBP20.31■□□□□ 0.84
CLN8-206ENST00000523237 FAM84BQ96KN1 310 aaPredicted RBP20.31■□□□□ 0.84
CLN8-206ENST00000523237 SCAF8Q9UPN6 1271 aaKnown RBP20.31■□□□□ 0.84
CLN8-206ENST00000523237 FAM205AQ6ZU69 1335 aa20.3■□□□□ 0.84
CLN8-206ENST00000523237 FKBP1BP68106 108 aa20.3■□□□□ 0.84
CLN8-206ENST00000523237 NOGQ13253 232 aa20.3■□□□□ 0.84
CLN8-206ENST00000523237 DLGAP5Q15398 846 aa20.3■□□□□ 0.84
CLN8-206ENST00000523237 VPS37DQ86XT2 251 aa20.3■□□□□ 0.84
CLN8-206ENST00000523237 VGLL2Q8N8G2 317 aa20.3■□□□□ 0.84
CLN8-206ENST00000523237 JAG2Q9Y219 1238 aa20.3■□□□□ 0.84
CLN8-206ENST00000523237 F8W031 263 aaPredicted RBP20.29■□□□□ 0.84
CLN8-206ENST00000523237 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
CLN8-206ENST00000523237 RFX5P48382 616 aaPredicted RBP20.29■□□□□ 0.84
CLN8-206ENST00000523237 LBX1P52954 281 aa20.29■□□□□ 0.84
CLN8-206ENST00000523237 CAVIN4Q5BKX8 364 aa20.29■□□□□ 0.84
CLN8-206ENST00000523237 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
CLN8-206ENST00000523237 CCDC102AQ96A19 550 aa20.29■□□□□ 0.84
CLN8-206ENST00000523237 ZBED3Q96IU2 234 aaPredicted RBP20.29■□□□□ 0.84
CLN8-206ENST00000523237 EYA2O00167 538 aa20.28■□□□□ 0.84
CLN8-206ENST00000523237 HSPA8P11142 646 aaKnown RBP20.28■□□□□ 0.84
CLN8-206ENST00000523237 ZNF157P51786 506 aaPredicted RBP20.28■□□□□ 0.84
CLN8-206ENST00000523237 INTS3Q68E01 1043 aaKnown RBP20.28■□□□□ 0.84
CLN8-206ENST00000523237 MTMR14Q8NCE2 650 aa20.28■□□□□ 0.84
CLN8-206ENST00000523237 NF2P35240 595 aa20.27■□□□□ 0.84
CLN8-206ENST00000523237 PTPN12Q05209 780 aaKnown RBP20.27■□□□□ 0.84
CLN8-206ENST00000523237 PUM3Q15397 648 aaKnown RBP20.27■□□□□ 0.84
CLN8-206ENST00000523237 MFSD14BQ5SR56 506 aa20.27■□□□□ 0.84
CLN8-206ENST00000523237 PRAMEF18Q5VWM3 479 aa20.27■□□□□ 0.84
CLN8-206ENST00000523237 FBXO33Q7Z6M2 555 aa20.27■□□□□ 0.84
CLN8-206ENST00000523237 LRRFIP2Q9Y608 721 aaKnown RBP20.27■□□□□ 0.84
CLN8-206ENST00000523237 COL1A1P02452 1464 aaPredicted RBP20.26■□□□□ 0.83
CLN8-206ENST00000523237 MYH13Q9UKX3 1938 aa20.26■□□□□ 0.83
CLN8-206ENST00000523237 FAM155AB1AL88 458 aaPredicted RBP20.26■□□□□ 0.83
CLN8-206ENST00000523237 CA12O43570 354 aa20.26■□□□□ 0.83
CLN8-206ENST00000523237 MYO1BO43795 1136 aa20.26■□□□□ 0.83
CLN8-206ENST00000523237 FRAT2O75474 233 aaPredicted RBP20.26■□□□□ 0.83
CLN8-206ENST00000523237 IFIT1P09914 478 aaKnown RBP20.26■□□□□ 0.83
CLN8-206ENST00000523237 CFAP100Q494V2 611 aa20.26■□□□□ 0.83
CLN8-206ENST00000523237 FRAT1Q92837 279 aaPredicted RBP20.26■□□□□ 0.83
CLN8-206ENST00000523237 MEIS3Q99687 375 aa20.26■□□□□ 0.83
CLN8-206ENST00000523237 FBXO3Q9UK99 471 aa20.26■□□□□ 0.83
CLN8-206ENST00000523237 BCAR3O75815 825 aa20.25■□□□□ 0.83
CLN8-206ENST00000523237 GNAI3P08754 354 aa20.25■□□□□ 0.83
CLN8-206ENST00000523237 SPDYE2BA6NHP3 402 aa20.24■□□□□ 0.83
CLN8-206ENST00000523237 CIAO1O76071 339 aa20.24■□□□□ 0.83
CLN8-206ENST00000523237 SLC10A3P09131 477 aa20.24■□□□□ 0.83
CLN8-206ENST00000523237 SPDYE6P0CI01 402 aa20.24■□□□□ 0.83
CLN8-206ENST00000523237 TRIM27P14373 513 aa20.24■□□□□ 0.83
CLN8-206ENST00000523237 FGFR2P21802 821 aa20.24■□□□□ 0.83
CLN8-206ENST00000523237 RBM5P52756 815 aaKnown RBP eCLIP20.24■□□□□ 0.83
CLN8-206ENST00000523237 ATF7IPQ6VMQ6 1270 aa20.24■□□□□ 0.83
CLN8-206ENST00000523237 TTF2Q9UNY4 1162 aaKnown RBP20.24■□□□□ 0.83
CLN8-206ENST00000523237 IQSEC3Q9UPP2 1182 aaPredicted RBP20.24■□□□□ 0.83
CLN8-206ENST00000523237 SLC5A1P13866 664 aa20.23■□□□□ 0.83
CLN8-206ENST00000523237 TTLL12Q14166 644 aaPredicted RBP20.23■□□□□ 0.83
CLN8-206ENST00000523237 ATG9AQ7Z3C6 839 aa20.23■□□□□ 0.83
CLN8-206ENST00000523237 TBC1D22AQ8WUA7 517 aa20.23■□□□□ 0.83
CLN8-206ENST00000523237 LPIN2Q92539 896 aa20.23■□□□□ 0.83
CLN8-206ENST00000523237 PRMT6Q96LA8 375 aaPredicted RBP20.23■□□□□ 0.83
CLN8-206ENST00000523237 ZIC5Q96T25 663 aa20.23■□□□□ 0.83
CLN8-206ENST00000523237 SIL1Q9H173 461 aa20.23■□□□□ 0.83
CLN8-206ENST00000523237 SERPINA10Q9UK55 444 aa20.23■□□□□ 0.83
CLN8-206ENST00000523237 PCDHAC2Q9Y5I4 1007 aa20.23■□□□□ 0.83
CLN8-206ENST00000523237 AKAP11Q9UKA4 1901 aa20.22■□□□□ 0.83
CLN8-206ENST00000523237 BCAMP50895 628 aa20.22■□□□□ 0.83
CLN8-206ENST00000523237 CHAF1AQ13111 956 aaPredicted RBP20.22■□□□□ 0.83
CLN8-206ENST00000523237 MOB2Q70IA6 237 aa20.22■□□□□ 0.83
CLN8-206ENST00000523237 DEFB129Q9H1M3 183 aa20.22■□□□□ 0.83
CLN8-206ENST00000523237 CEP126Q9P2H0 1117 aa20.22■□□□□ 0.83
CLN8-206ENST00000523237 PPP2R3BQ9Y5P8 575 aa20.22■□□□□ 0.83
CLN8-206ENST00000523237 CLRN2A0PK11 232 aa20.21■□□□□ 0.83
CLN8-206ENST00000523237 UBE2Q2LH0YL09 131 aa20.21■□□□□ 0.83
CLN8-206ENST00000523237 KIF23Q02241 960 aaPredicted RBP20.21■□□□□ 0.83
CLN8-206ENST00000523237 IL15P40933 162 aaPredicted RBP20.2■□□□□ 0.82
CLN8-206ENST00000523237 ZKSCAN2Q63HK3 967 aa20.2■□□□□ 0.82
CLN8-206ENST00000523237 ARMC9Q7Z3E5 817 aa20.2■□□□□ 0.82
CLN8-206ENST00000523237 RASAL3Q86YV0 1011 aa20.2■□□□□ 0.82
CLN8-206ENST00000523237 CLUAP1Q96AJ1 413 aa20.2■□□□□ 0.82
CLN8-206ENST00000523237 VEZTQ9HBM0 779 aa20.2■□□□□ 0.82
CLN8-206ENST00000523237 COPRSQ9NQ92 184 aa20.2■□□□□ 0.82
CLN8-206ENST00000523237 TSKSQ9UJT2 592 aa20.2■□□□□ 0.82
CLN8-206ENST00000523237 ZBED9Q6R2W3 1325 aa20.2■□□□□ 0.82
CLN8-206ENST00000523237 ATP2B3Q16720 1220 aa20.19■□□□□ 0.82
CLN8-206ENST00000523237 REM2Q8IYK8 340 aaPredicted RBP20.19■□□□□ 0.82
CLN8-206ENST00000523237 PA2G4Q9UQ80 394 aaKnown RBP20.19■□□□□ 0.82
CLN8-206ENST00000523237 TNNQ9UQP3 1299 aa20.19■□□□□ 0.82
CLN8-206ENST00000523237 SRGAP3O43295 1099 aa20.18■□□□□ 0.82
CLN8-206ENST00000523237 CRKP46108 304 aa20.18■□□□□ 0.82
CLN8-206ENST00000523237 MTX1Q13505 466 aa20.18■□□□□ 0.82
CLN8-206ENST00000523237 PRKG1Q13976 671 aa20.18■□□□□ 0.82
CLN8-206ENST00000523237 DZIP1LQ8IYY4 767 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms