RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 BCAMP50895 628 aa13.06□□□□□ -0.32
DENND3-220ENST00000523066 TFCP2Q12800 502 aa13.06□□□□□ -0.32
DENND3-220ENST00000523066 PUM3Q15397 648 aaKnown RBP13.06□□□□□ -0.32
DENND3-220ENST00000523066 STRIP1Q5VSL9 837 aa13.06□□□□□ -0.32
DENND3-220ENST00000523066 USP50Q70EL3 339 aaPredicted RBP13.06□□□□□ -0.32
DENND3-220ENST00000523066 CERS5Q8N5B7 392 aa13.06□□□□□ -0.32
DENND3-220ENST00000523066 ASTN2O75129 1339 aaPredicted RBP13.06□□□□□ -0.32
DENND3-220ENST00000523066 ITGBL1O95965 494 aaPredicted RBP13.05□□□□□ -0.32
DENND3-220ENST00000523066 MS4A1P11836 297 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 RPS12P25398 132 aaKnown RBP13.05□□□□□ -0.32
DENND3-220ENST00000523066 ADORA1P30542 326 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 IL15P40933 162 aaPredicted RBP13.05□□□□□ -0.32
DENND3-220ENST00000523066 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 DLK2Q6UY11 383 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 FBXO33Q7Z6M2 555 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 KIAA0825Q8IV33 1275 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 AGBL3Q8NEM8 1001 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
DENND3-220ENST00000523066 SSH3Q8TE77 659 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
DENND3-220ENST00000523066 F8W031 263 aaPredicted RBP13.04□□□□□ -0.32
DENND3-220ENST00000523066 TRAF5O00463 557 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 SASH1O94885 1247 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 IFIT1P09914 478 aaKnown RBP13.04□□□□□ -0.32
DENND3-220ENST00000523066 TIMM10P62072 90 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 GRIK5Q16478 980 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 ZBTB40Q9NUA8 1239 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 DDX19BQ9UMR2 479 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 SCAF8Q9UPN6 1271 aaKnown RBP13.04□□□□□ -0.32
DENND3-220ENST00000523066 ZNF609O15014 1411 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
DENND3-220ENST00000523066 USP17L8P0C7I0 530 aa13.03□□□□□ -0.32
DENND3-220ENST00000523066 SLC5A1P13866 664 aa13.03□□□□□ -0.32
DENND3-220ENST00000523066 RRP1P56182 461 aaKnown RBP13.03□□□□□ -0.32
DENND3-220ENST00000523066 ZNF280AP59817 542 aaPredicted RBP13.03□□□□□ -0.32
DENND3-220ENST00000523066 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
DENND3-220ENST00000523066 PDE3AQ14432 1141 aa13.03□□□□□ -0.32
DENND3-220ENST00000523066 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
DENND3-220ENST00000523066 LPIN2Q92539 896 aa13.03□□□□□ -0.32
DENND3-220ENST00000523066 GLIS2Q9BZE0 524 aaPredicted RBP13.03□□□□□ -0.32
DENND3-220ENST00000523066 PCDHAC2Q9Y5I4 1007 aa13.03□□□□□ -0.32
DENND3-220ENST00000523066 PASKQ96RG2 1323 aa13.03□□□□□ -0.32
DENND3-220ENST00000523066 COL1A1P02452 1464 aaPredicted RBP13.03□□□□□ -0.32
DENND3-220ENST00000523066 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.33
DENND3-220ENST00000523066 PHKA1P46020 1223 aa13.02□□□□□ -0.33
DENND3-220ENST00000523066 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.33
DENND3-220ENST00000523066 CAVIN4Q5BKX8 364 aa13.02□□□□□ -0.33
DENND3-220ENST00000523066 VPS37DQ86XT2 251 aa13.02□□□□□ -0.33
DENND3-220ENST00000523066 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
DENND3-220ENST00000523066 MYOZ2Q9NPC6 264 aa13.02□□□□□ -0.33
DENND3-220ENST00000523066 FAM205AQ6ZU69 1335 aa13.02□□□□□ -0.33
DENND3-220ENST00000523066 A0A1B0GUL7 405 aa13.01□□□□□ -0.33
DENND3-220ENST00000523066 APLP1P51693 650 aa13.01□□□□□ -0.33
DENND3-220ENST00000523066 SCARF1Q14162 830 aa13.01□□□□□ -0.33
DENND3-220ENST00000523066 NBPF9Q3BBW0 867 aa13.01□□□□□ -0.33
DENND3-220ENST00000523066 PGAP2Q9UHJ9 254 aa13.01□□□□□ -0.33
DENND3-220ENST00000523066 EXOC6BQ9Y2D4 811 aa13.01□□□□□ -0.33
DENND3-220ENST00000523066 MYO3BQ8WXR4 1341 aa13.01□□□□□ -0.33
DENND3-220ENST00000523066 ECM29Q5VYK3 1845 aa13□□□□□ -0.33
DENND3-220ENST00000523066 AOX1Q06278 1338 aa13□□□□□ -0.33
DENND3-220ENST00000523066 FRAT2O75474 233 aaPredicted RBP13□□□□□ -0.33
DENND3-220ENST00000523066 OS9Q13438 667 aaPredicted RBP13□□□□□ -0.33
DENND3-220ENST00000523066 MFSD14BQ5SR56 506 aa13□□□□□ -0.33
DENND3-220ENST00000523066 USP48Q86UV5 1035 aa13□□□□□ -0.33
DENND3-220ENST00000523066 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
DENND3-220ENST00000523066 XAGE2Q96GT9 111 aa13□□□□□ -0.33
DENND3-220ENST00000523066 NEUROD6Q96NK8 337 aa13□□□□□ -0.33
DENND3-220ENST00000523066 GGA3Q9NZ52 723 aa13□□□□□ -0.33
DENND3-220ENST00000523066 ADM5C9JUS6 153 aa12.99□□□□□ -0.33
DENND3-220ENST00000523066 WNT10BO00744 389 aa12.99□□□□□ -0.33
DENND3-220ENST00000523066 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
DENND3-220ENST00000523066 CCDC102BQ68D86 513 aa12.99□□□□□ -0.33
DENND3-220ENST00000523066 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
DENND3-220ENST00000523066 MYO5AQ9Y4I1 1855 aaKnown RBP12.98□□□□□ -0.33
DENND3-220ENST00000523066 APBB1O00213 710 aa12.98□□□□□ -0.33
DENND3-220ENST00000523066 FKBP1AP62942 108 aaKnown RBP12.98□□□□□ -0.33
DENND3-220ENST00000523066 OGFOD1Q8N543 542 aa12.98□□□□□ -0.33
DENND3-220ENST00000523066 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
DENND3-220ENST00000523066 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
DENND3-220ENST00000523066 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
DENND3-220ENST00000523066 CFAP100Q494V2 611 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 TNNI3KQ59H18 835 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 PRAMEF18Q5VWM3 479 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 CST9Q5W186 159 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 CDC37L1Q7L3B6 337 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 KRT26Q7Z3Y9 468 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
DENND3-220ENST00000523066 DCPSQ96C86 337 aaKnown RBP12.97□□□□□ -0.33
DENND3-220ENST00000523066 ZBED3Q96IU2 234 aaPredicted RBP12.97□□□□□ -0.33
DENND3-220ENST00000523066 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 BCL11AQ9H165 835 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 ZNF408Q9H9D4 720 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 TLR7Q9NYK1 1049 aaKnown RBP12.97□□□□□ -0.33
DENND3-220ENST00000523066 HDAC9Q9UKV0 1011 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 AKAP2Q9Y2D5 859 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 FPGT-TNNI3KV9GXZ4 949 aa12.97□□□□□ -0.33
DENND3-220ENST00000523066 AKAP11Q9UKA4 1901 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms