RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 MFAP1P55081 439 aaKnown RBP8.44□□□□□ -1.06
CSMD1-211ENST00000523062 KRT76Q01546 638 aa8.44□□□□□ -1.06
CSMD1-211ENST00000523062 CWF19L2Q2TBE0 894 aaKnown RBP8.44□□□□□ -1.06
CSMD1-211ENST00000523062 PIGBQ92521 554 aa8.44□□□□□ -1.06
CSMD1-211ENST00000523062 MYD88Q99836 296 aa8.44□□□□□ -1.06
CSMD1-211ENST00000523062 AOX1Q06278 1338 aa8.44□□□□□ -1.06
CSMD1-211ENST00000523062 COL15A1P39059 1388 aa8.44□□□□□ -1.06
CSMD1-211ENST00000523062 SURF6O75683 361 aaKnown RBP8.43□□□□□ -1.06
CSMD1-211ENST00000523062 PIP4K2AP48426 406 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-211ENST00000523062 GCKRQ14397 625 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 DDB1Q16531 1140 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 NBPF14Q5TI25 921 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 NBPF10Q6P3W6 841 aaKnown RBP8.43□□□□□ -1.06
CSMD1-211ENST00000523062 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 C16orf71Q8IYS4 520 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-211ENST00000523062 SVOPQ8N4V2 548 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 NBPF15Q8N660 670 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 OTUD7AQ8TE49 926 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-211ENST00000523062 KIF1BPQ96EK5 621 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 SUCLG2Q96I99 432 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 OSBPL3Q9H4L5 887 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 ATG3Q9NT62 314 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 ARFGEF2Q9Y6D5 1785 aa8.43□□□□□ -1.06
CSMD1-211ENST00000523062 STARD3NLO95772 234 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 CCNYL3P0C7X3 344 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 MX1P20591 662 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 PDE1AP54750 535 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 OS9Q13438 667 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-211ENST00000523062 ZNF385CQ66K41 422 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-211ENST00000523062 CASC1Q6TDU7 716 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 ERC1Q8IUD2 1116 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 BAP1Q92560 729 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 KRTAP4-8Q9BYQ9 185 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 C22orf23Q9BZE7 217 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 UNC93B1Q9H1C4 597 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 ASAP1Q9ULH1 1129 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 CCDC9Q9Y3X0 531 aaKnown RBP8.42□□□□□ -1.06
CSMD1-211ENST00000523062 SALL3Q9BXA9 1300 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 ITGB4P16144 1822 aa8.42□□□□□ -1.06
CSMD1-211ENST00000523062 DOT1LQ8TEK3 1739 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 SPATA31A6Q5VVP1 1343 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 A1BGP04217 495 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 MARSP56192 900 aaKnown RBP8.41□□□□□ -1.06
CSMD1-211ENST00000523062 BECN1Q14457 450 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 LINC01559Q495D7 138 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 UNC5CLQ8IV45 518 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 DNAJC10Q8IXB1 793 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 GPR161Q8N6U8 529 aaKnown RBP8.41□□□□□ -1.06
CSMD1-211ENST00000523062 RHPN1Q8TCX5 695 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 SCARF2Q96GP6 870 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-211ENST00000523062 BCL11AQ9H165 835 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 BICC1Q9H694 974 aaKnown RBP8.41□□□□□ -1.06
CSMD1-211ENST00000523062 EVA1BQ9NVM1 165 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 STAP2Q9UGK3 403 aa8.41□□□□□ -1.06
CSMD1-211ENST00000523062 NUP188Q5SRE5 1749 aa8.4□□□□□ -1.06
CSMD1-211ENST00000523062 UPP2O95045 317 aa8.4□□□□□ -1.06
CSMD1-211ENST00000523062 SDSP20132 328 aa8.4□□□□□ -1.06
CSMD1-211ENST00000523062 VPS72Q15906 364 aa8.4□□□□□ -1.06
CSMD1-211ENST00000523062 C6orf118Q5T5N4 469 aa8.4□□□□□ -1.06
CSMD1-211ENST00000523062 KIF6Q6ZMV9 814 aa8.4□□□□□ -1.06
CSMD1-211ENST00000523062 TTLL7Q6ZT98 887 aa8.4□□□□□ -1.06
CSMD1-211ENST00000523062 USP42Q9H9J4 1324 aaKnown RBP8.39□□□□□ -1.07
CSMD1-211ENST00000523062 AFDNP55196 1824 aaKnown RBP8.39□□□□□ -1.07
CSMD1-211ENST00000523062 A0A087WZG4 1122 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 ATP5J2-PTCD1G3V325 749 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 ADAM23O75077 832 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 RBM25P49756 843 aaKnown RBP8.39□□□□□ -1.07
CSMD1-211ENST00000523062 UBE3BQ7Z3V4 1068 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 CLASRPQ8N2M8 674 aaKnown RBP8.39□□□□□ -1.07
CSMD1-211ENST00000523062 ZNF511Q8NB15 262 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 CCDC191Q8NCU4 936 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 SYTL4Q96C24 671 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-211ENST00000523062 KAZALD1Q96I82 304 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 NGLY1Q96IV0 654 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 C8orf37Q96NL8 207 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 ANP32EQ9BTT0 268 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-211ENST00000523062 IL1RAPL2Q9NP60 686 aa8.39□□□□□ -1.07
CSMD1-211ENST00000523062 CWC25Q9NXE8 425 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-211ENST00000523062 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.38□□□□□ -1.07
CSMD1-211ENST00000523062 TTC41PQ6P2S7 1318 aa8.38□□□□□ -1.07
CSMD1-211ENST00000523062 ARHGEF15O94989 841 aa8.38□□□□□ -1.07
CSMD1-211ENST00000523062 CYP19A1P11511 503 aaPredicted RBP8.38□□□□□ -1.07
CSMD1-211ENST00000523062 CASP7P55210 303 aa8.38□□□□□ -1.07
CSMD1-211ENST00000523062 G3BP1Q13283 466 aaKnown RBP eCLIP8.38□□□□□ -1.07
CSMD1-211ENST00000523062 PTPRNQ16849 979 aa8.38□□□□□ -1.07
CSMD1-211ENST00000523062 RABL6Q3YEC7 729 aaPredicted RBP8.38□□□□□ -1.07
CSMD1-211ENST00000523062 MARCH10Q8NA82 808 aaPredicted RBP8.38□□□□□ -1.07
CSMD1-211ENST00000523062 GPATCH3Q96I76 525 aa8.38□□□□□ -1.07
CSMD1-211ENST00000523062 ZBTB3Q9H5J0 574 aa8.38□□□□□ -1.07
CSMD1-211ENST00000523062 PA2G4Q9UQ80 394 aaKnown RBP8.38□□□□□ -1.07
CSMD1-211ENST00000523062 BCL9LQ86UU0 1499 aa8.38□□□□□ -1.07
CSMD1-211ENST00000523062 TJP1Q07157 1748 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 CICQ96RK0 1608 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-211ENST00000523062 MAP3K15Q6ZN16 1313 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 H7C1W4 665 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 ERC2O15083 957 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 REC8O95072 547 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 ZIC2O95409 532 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms