RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PAPOLAP51003 745 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 CAPRIN2Q6IMN6 1127 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 BRAPQ7Z569 592 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 CCDC50Q8IVM0 306 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 GPR161Q8N6U8 529 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 ZFAND2BQ8WV99 257 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 DTNBP1Q96EV8 351 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 RSRC1Q96IZ7 334 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 DNAAF2Q9NVR5 837 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 DDX20Q9UHI6 824 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 FYCO1Q9BQS8 1478 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 USP27XA6NNY8 438 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 TADA3O75528 432 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 CHGAP10645 457 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 ADCY1Q08828 1119 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 MKRN3Q13064 507 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 CEP85LQ5SZL2 805 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 MTHFD1LQ6UB35 978 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 LRRN4CLQ8ND94 238 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 GABPB2Q8TAK5 448 aaPredicted RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 CACTINQ8WUQ7 758 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 NEUROD6Q96NK8 337 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 RBM42Q9BTD8 480 aaKnown RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 CENPOQ9BU64 300 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 PARD6BQ9BYG5 372 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 SENP2Q9HC62 589 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 EXOC1Q9NV70 894 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 DNAI1Q9UI46 699 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 MAPK8IP1Q9UQF2 711 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 CAPN7Q9Y6W3 813 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 TEX14Q8IWB6 1497 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 FAM135AQ9P2D6 1515 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 ERICH2A1L162 156 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 BBOX1O75936 387 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 RPL13P26373 211 aaKnown RBP9.43□□□□□ -0.9
HMGB4-204ENST00000522796 ATP11CQ8NB49 1132 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 CNNM3Q8NE01 707 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 FAM200AQ8TCP9 573 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 GIMAP1Q8WWP7 306 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 ARHGAP45Q92619 1136 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 SLC39A3Q9BRY0 314 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.43□□□□□ -0.9
HMGB4-204ENST00000522796 GIGYF1O75420 1035 aaPredicted RBP9.43□□□□□ -0.9
HMGB4-204ENST00000522796 RNF8O76064 485 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 FERP16591 822 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 CDC25BP30305 580 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 ATP2B2Q01814 1243 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 KBTBD12Q3ZCT8 623 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.43□□□□□ -0.9
HMGB4-204ENST00000522796 PLA2G4DQ86XP0 818 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 CCDC170Q8IYT3 715 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 CCAR2Q8N163 923 aaKnown RBP9.43□□□□□ -0.9
HMGB4-204ENST00000522796 FAM71BQ8TC56 605 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 HOOK2Q96ED9 719 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 PAGR1Q9BTK6 254 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 BICC1Q9H694 974 aaKnown RBP9.43□□□□□ -0.9
HMGB4-204ENST00000522796 KLC4Q9NSK0 619 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 PPP1R1BQ9UD71 204 aaPredicted RBP9.43□□□□□ -0.9
HMGB4-204ENST00000522796 WDR37Q9Y2I8 494 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 AMOTL2Q9Y2J4 779 aa9.43□□□□□ -0.9
HMGB4-204ENST00000522796 CUX1P39880 1505 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 GBP2P32456 591 aaPredicted RBP9.42□□□□□ -0.9
HMGB4-204ENST00000522796 MIS18BP1Q6P0N0 1132 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 DRC7Q8IY82 874 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 TMEM87AQ8NBN3 555 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 CUL5Q93034 780 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 CAVIN2O95810 425 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 PABPC4Q13310 644 aaKnown RBP eCLIP9.42□□□□□ -0.9
HMGB4-204ENST00000522796 KIAA0753Q2KHM9 967 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 SLF2Q8IX21 1173 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 LMNTD2Q8IXW0 634 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 VMP1Q96GC9 406 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 GORASP1Q9BQQ3 440 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
HMGB4-204ENST00000522796 CORO1CQ9ULV4 474 aaPredicted RBP9.42□□□□□ -0.9
HMGB4-204ENST00000522796 ANKRD50Q9ULJ7 1429 aa9.42□□□□□ -0.9
HMGB4-204ENST00000522796 KDM5CP41229 1560 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 CCDC151A5D8V7 595 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 SNW1Q13573 536 aaKnown RBP9.41□□□□□ -0.9
HMGB4-204ENST00000522796 PLCB4Q15147 1175 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 LONRF2Q1L5Z9 754 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 WAPLQ7Z5K2 1190 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 FNBP4Q8N3X1 1017 aaPredicted RBP9.41□□□□□ -0.9
HMGB4-204ENST00000522796 PANK1Q8TE04 598 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 USP33Q8TEY7 942 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 SLC35B4Q969S0 331 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 MUC3BQ9H195 1237 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 SLC39A2Q9NP94 309 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 COMMD8Q9NX08 183 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 HDAC6Q9UBN7 1215 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 SEL1LQ9UBV2 794 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 FAN1Q9Y2M0 1017 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 USP47Q96K76 1375 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 NESP48681 1621 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 MYO1FO00160 1098 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 MSL3P1P0C860 447 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 SLC8A1P32418 973 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 SCNN1BP51168 640 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms