RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 TMC4Q7Z404 712 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 NEK1Q96PY6 1258 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 CRAMP1Q96RY5 1269 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 BRIP1Q9BX63 1249 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 STK32BQ9NY57 414 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 ZNF804BA4D1E1 1349 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 PSDA5PKW4 1024 aaPredicted RBP11.55□□□□□ -0.56
SPARC-205ENST00000522348 PDE6AP16499 860 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 RPS6KB1P23443 525 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 HIBADHP31937 336 aaKnown RBP11.55□□□□□ -0.56
SPARC-205ENST00000522348 GYG1P46976 350 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 AK2P54819 239 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 DDR1Q08345 913 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 NBR1Q14596 966 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 TMED8Q6PL24 325 aaPredicted RBP11.55□□□□□ -0.56
SPARC-205ENST00000522348 PUS7LQ9H0K6 701 aaKnown RBP11.55□□□□□ -0.56
SPARC-205ENST00000522348 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 ZNF532Q9HCE3 1301 aa11.55□□□□□ -0.56
SPARC-205ENST00000522348 CYP21A2P08686 494 aa11.54□□□□□ -0.56
SPARC-205ENST00000522348 IMMTQ16891 758 aaKnown RBP11.54□□□□□ -0.56
SPARC-205ENST00000522348 SLFNL1Q499Z3 407 aa11.54□□□□□ -0.56
SPARC-205ENST00000522348 C15orf52Q6ZUT6 534 aaKnown RBP11.54□□□□□ -0.56
SPARC-205ENST00000522348 SH2B1Q9NRF2 756 aaPredicted RBP11.54□□□□□ -0.56
SPARC-205ENST00000522348 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
SPARC-205ENST00000522348 XDHP47989 1333 aa11.54□□□□□ -0.56
SPARC-205ENST00000522348 PDS5AQ29RF7 1337 aaKnown RBP11.54□□□□□ -0.56
SPARC-205ENST00000522348 UBR3Q6ZT12 1888 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 TCRBV5S4A2TA0A5A2 114 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 PATL2C9JE40 543 aaKnown RBP11.53□□□□□ -0.56
SPARC-205ENST00000522348 GPAA1O43292 621 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 FRAT2O75474 233 aaPredicted RBP11.53□□□□□ -0.56
SPARC-205ENST00000522348 FGAP02671 866 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 GNAT2P19087 354 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 ATP2B4P23634 1241 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 PDE6BP35913 854 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 RAB3GAP1Q15042 981 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 ALX1Q15699 326 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 MAGEB6Q8N7X4 407 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 AIDAQ96BJ3 306 aa11.53□□□□□ -0.56
SPARC-205ENST00000522348 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
SPARC-205ENST00000522348 RPAP1Q9BWH6 1393 aaPredicted RBP11.53□□□□□ -0.56
SPARC-205ENST00000522348 C4AP0C0L4 1744 aa11.52□□□□□ -0.56
SPARC-205ENST00000522348 ZNF213O14771 459 aa11.52□□□□□ -0.57
SPARC-205ENST00000522348 SLC15A2Q16348 729 aa11.52□□□□□ -0.57
SPARC-205ENST00000522348 SPTY2D1Q68D10 685 aaPredicted RBP11.52□□□□□ -0.57
SPARC-205ENST00000522348 DHX32Q7L7V1 743 aaKnown RBP11.52□□□□□ -0.57
SPARC-205ENST00000522348 SP8Q8IXZ3 490 aa11.52□□□□□ -0.57
SPARC-205ENST00000522348 CHMP4CQ96CF2 233 aa11.52□□□□□ -0.57
SPARC-205ENST00000522348 STRBPQ96SI9 672 aaKnown RBP11.52□□□□□ -0.57
SPARC-205ENST00000522348 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
SPARC-205ENST00000522348 PNPLA7Q6ZV29 1317 aa11.52□□□□□ -0.57
SPARC-205ENST00000522348 EP400Q96L91 3159 aa11.51□□□□□ -0.57
SPARC-205ENST00000522348 WTIPA6NIX2 430 aaPredicted RBP11.51□□□□□ -0.57
SPARC-205ENST00000522348 E7EWF7 191 aa11.51□□□□□ -0.57
SPARC-205ENST00000522348 APPP05067 770 aa11.51□□□□□ -0.57
SPARC-205ENST00000522348 PDIA4P13667 645 aaKnown RBP11.51□□□□□ -0.57
SPARC-205ENST00000522348 CPA1P15085 419 aa11.51□□□□□ -0.57
SPARC-205ENST00000522348 NPR1P16066 1061 aa11.51□□□□□ -0.57
SPARC-205ENST00000522348 NOL8Q76FK4 1167 aaKnown RBP11.51□□□□□ -0.57
SPARC-205ENST00000522348 ZNF804AQ7Z570 1209 aa11.51□□□□□ -0.57
SPARC-205ENST00000522348 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
SPARC-205ENST00000522348 TMX4Q9H1E5 349 aaPredicted RBP11.51□□□□□ -0.57
SPARC-205ENST00000522348 PODXL2Q9NZ53 605 aa11.51□□□□□ -0.57
SPARC-205ENST00000522348 RAI14Q9P0K7 980 aa11.51□□□□□ -0.57
SPARC-205ENST00000522348 ABCF2Q9UG63 623 aa11.51□□□□□ -0.57
SPARC-205ENST00000522348 NSFL1CQ9UNZ2 370 aaKnown RBP11.51□□□□□ -0.57
SPARC-205ENST00000522348 ARAP2Q8WZ64 1704 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 RGPD3A6NKT7 1758 aaPredicted RBP11.5□□□□□ -0.57
SPARC-205ENST00000522348 RGPD4Q7Z3J3 1758 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 MMP10P09238 476 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 PTMSP20962 102 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 CYP7A1P22680 504 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 EXOSC10Q01780 885 aaKnown RBP11.5□□□□□ -0.57
SPARC-205ENST00000522348 CLEC17AQ6ZS10 378 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 WDR66Q8TBY9 1149 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 TNPO1Q92973 898 aaKnown RBP11.5□□□□□ -0.57
SPARC-205ENST00000522348 GBP4Q96PP9 640 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 NACAP1Q9BZK3 213 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 GGA1Q9UJY5 639 aa11.5□□□□□ -0.57
SPARC-205ENST00000522348 IQSEC3Q9UPP2 1182 aaPredicted RBP11.5□□□□□ -0.57
SPARC-205ENST00000522348 SRGNP10124 158 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 MCM4P33991 863 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 GPSM2P81274 684 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 FGD1P98174 961 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 TTLL5Q6EMB2 1281 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 FBXL16Q8N461 479 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 TDRD7Q8NHU6 1098 aaKnown RBP11.49□□□□□ -0.57
SPARC-205ENST00000522348 TAF6LQ9Y6J9 622 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 ZMYM6O95789 1325 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 IRS2Q9Y4H2 1338 aa11.49□□□□□ -0.57
SPARC-205ENST00000522348 AKAP11Q9UKA4 1901 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 MAGEB6P1A0A0J9YX57 407 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 FOXP2O15409 715 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 MBD4O95243 580 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 TRDNQ13061 729 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 TOB2Q14106 344 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms