RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MOB2Q70IA6 237 aa26.03■■□□□ 1.76
SDCBP-209ENST00000522243 KLHDC4Q8TBB5 520 aa26.03■■□□□ 1.76
SDCBP-209ENST00000522243 CCDC102AQ96A19 550 aa26.02■■□□□ 1.76
SDCBP-209ENST00000522243 NOB1Q9ULX3 412 aaKnown RBP26.02■■□□□ 1.76
SDCBP-209ENST00000522243 PCDHAC2Q9Y5I4 1007 aa26.02■■□□□ 1.76
SDCBP-209ENST00000522243 MMP14P50281 582 aa26.01■■□□□ 1.75
SDCBP-209ENST00000522243 MROH5Q6ZUA9 1318 aa26.01■■□□□ 1.75
SDCBP-209ENST00000522243 ZBED3Q96IU2 234 aaPredicted RBP26.01■■□□□ 1.75
SDCBP-209ENST00000522243 PAPPA2Q9BXP8 1791 aa26.01■■□□□ 1.75
SDCBP-209ENST00000522243 CT47B1P0C2W7 299 aaPredicted RBP26■■□□□ 1.75
SDCBP-209ENST00000522243 DLGAP5Q15398 846 aa26■■□□□ 1.75
SDCBP-209ENST00000522243 HIBADHP31937 336 aaKnown RBP25.99■■□□□ 1.75
SDCBP-209ENST00000522243 KIF23Q02241 960 aaPredicted RBP25.99■■□□□ 1.75
SDCBP-209ENST00000522243 METTL24Q5JXM2 366 aa25.99■■□□□ 1.75
SDCBP-209ENST00000522243 TDRD7Q8NHU6 1098 aaKnown RBP25.99■■□□□ 1.75
SDCBP-209ENST00000522243 FAM84BQ96KN1 310 aaPredicted RBP25.99■■□□□ 1.75
SDCBP-209ENST00000522243 UBE2Q2LH0YL09 131 aa25.98■■□□□ 1.75
SDCBP-209ENST00000522243 SLC10A3P09131 477 aa25.98■■□□□ 1.75
SDCBP-209ENST00000522243 FKBP1BP68106 108 aa25.98■■□□□ 1.75
SDCBP-209ENST00000522243 TTLL12Q14166 644 aaPredicted RBP25.98■■□□□ 1.75
SDCBP-209ENST00000522243 FKBP1AP62942 108 aaKnown RBP25.97■■□□□ 1.75
SDCBP-209ENST00000522243 CFAP100Q494V2 611 aa25.97■■□□□ 1.75
SDCBP-209ENST00000522243 APOBEC3FQ8IUX4 373 aaKnown RBP25.97■■□□□ 1.75
SDCBP-209ENST00000522243 ECM29Q5VYK3 1845 aa25.97■■□□□ 1.75
SDCBP-209ENST00000522243 FAM205AQ6ZU69 1335 aa25.96■■□□□ 1.75
SDCBP-209ENST00000522243 CA12O43570 354 aa25.96■■□□□ 1.75
SDCBP-209ENST00000522243 RASAL3Q86YV0 1011 aa25.96■■□□□ 1.75
SDCBP-209ENST00000522243 IQSEC3Q9UPP2 1182 aaPredicted RBP25.96■■□□□ 1.75
SDCBP-209ENST00000522243 NF2P35240 595 aa25.95■■□□□ 1.74
SDCBP-209ENST00000522243 RBM5P52756 815 aaKnown RBP eCLIP25.95■■□□□ 1.74
SDCBP-209ENST00000522243 RARSP54136 660 aaKnown RBP25.95■■□□□ 1.74
SDCBP-209ENST00000522243 PRKG1Q13976 671 aa25.95■■□□□ 1.74
SDCBP-209ENST00000522243 VGLL2Q8N8G2 317 aa25.95■■□□□ 1.74
SDCBP-209ENST00000522243 PRMT6Q96LA8 375 aaPredicted RBP25.95■■□□□ 1.74
SDCBP-209ENST00000522243 API5Q9BZZ5 524 aaKnown RBP25.95■■□□□ 1.74
SDCBP-209ENST00000522243 CLRN2A0PK11 232 aa25.94■■□□□ 1.74
SDCBP-209ENST00000522243 PDE8BO95263 885 aa25.94■■□□□ 1.74
SDCBP-209ENST00000522243 UBTFL1P0CB47 393 aaPredicted RBP25.94■■□□□ 1.74
SDCBP-209ENST00000522243 RFX5P48382 616 aaPredicted RBP25.94■■□□□ 1.74
SDCBP-209ENST00000522243 MFSD14BQ5SR56 506 aa25.94■■□□□ 1.74
SDCBP-209ENST00000522243 VPS37DQ86XT2 251 aa25.94■■□□□ 1.74
SDCBP-209ENST00000522243 MTMR14Q8NCE2 650 aa25.94■■□□□ 1.74
SDCBP-209ENST00000522243 CASP8AP2Q9UKL3 1982 aa25.94■■□□□ 1.74
SDCBP-209ENST00000522243 AOX1Q06278 1338 aa25.93■■□□□ 1.74
SDCBP-209ENST00000522243 FBXO33Q7Z6M2 555 aa25.93■■□□□ 1.74
SDCBP-209ENST00000522243 SPDYE2BA6NHP3 402 aa25.92■■□□□ 1.74
SDCBP-209ENST00000522243 SPDYE6P0CI01 402 aa25.92■■□□□ 1.74
SDCBP-209ENST00000522243 MIER1Q8N108 512 aa25.92■■□□□ 1.74
SDCBP-209ENST00000522243 CSRNP1Q96S65 589 aa25.92■■□□□ 1.74
SDCBP-209ENST00000522243 DEFB129Q9H1M3 183 aa25.92■■□□□ 1.74
SDCBP-209ENST00000522243 TTF2Q9UNY4 1162 aaKnown RBP25.92■■□□□ 1.74
SDCBP-209ENST00000522243 FZD1Q9UP38 647 aa25.92■■□□□ 1.74
SDCBP-209ENST00000522243 AKAP11Q9UKA4 1901 aa25.92■■□□□ 1.74
SDCBP-209ENST00000522243 ARAP2Q8WZ64 1704 aa25.91■■□□□ 1.74
SDCBP-209ENST00000522243 MYO1BO43795 1136 aa25.91■■□□□ 1.74
SDCBP-209ENST00000522243 CHAF1AQ13111 956 aaPredicted RBP25.91■■□□□ 1.74
SDCBP-209ENST00000522243 CAVIN4Q5BKX8 364 aa25.91■■□□□ 1.74
SDCBP-209ENST00000522243 VEZTQ9HBM0 779 aa25.91■■□□□ 1.74
SDCBP-209ENST00000522243 EYA2O00167 538 aa25.9■■□□□ 1.74
SDCBP-209ENST00000522243 PTPN12Q05209 780 aaKnown RBP25.9■■□□□ 1.74
SDCBP-209ENST00000522243 FRAT2O75474 233 aaPredicted RBP25.89■■□□□ 1.74
SDCBP-209ENST00000522243 TRPA1O75762 1119 aa25.89■■□□□ 1.74
SDCBP-209ENST00000522243 BCAMP50895 628 aa25.89■■□□□ 1.74
SDCBP-209ENST00000522243 GRIK5Q16478 980 aa25.89■■□□□ 1.74
SDCBP-209ENST00000522243 ARMC9Q7Z3E5 817 aa25.89■■□□□ 1.74
SDCBP-209ENST00000522243 RNF186Q9NXI6 227 aa25.89■■□□□ 1.74
SDCBP-209ENST00000522243 LRRFIP2Q9Y608 721 aaKnown RBP25.89■■□□□ 1.74
SDCBP-209ENST00000522243 COL1A1P02452 1464 aaPredicted RBP25.88■■□□□ 1.73
SDCBP-209ENST00000522243 IFIT1P09914 478 aaKnown RBP25.88■■□□□ 1.73
SDCBP-209ENST00000522243 MKRN3Q13064 507 aaKnown RBP25.88■■□□□ 1.73
SDCBP-209ENST00000522243 MEIS3Q99687 375 aa25.88■■□□□ 1.73
SDCBP-209ENST00000522243 SIL1Q9H173 461 aa25.88■■□□□ 1.73
SDCBP-209ENST00000522243 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.88■■□□□ 1.73
SDCBP-209ENST00000522243 ANGEL1Q9UNK9 670 aaKnown RBP25.88■■□□□ 1.73
SDCBP-209ENST00000522243 FGFR2P21802 821 aa25.87■■□□□ 1.73
SDCBP-209ENST00000522243 PUM3Q15397 648 aaKnown RBP25.87■■□□□ 1.73
SDCBP-209ENST00000522243 DIEXFQ68CQ4 756 aaKnown RBP25.87■■□□□ 1.73
SDCBP-209ENST00000522243 ATG9AQ7Z3C6 839 aa25.87■■□□□ 1.73
SDCBP-209ENST00000522243 ABHD8Q96I13 439 aa25.87■■□□□ 1.73
SDCBP-209ENST00000522243 KIF16BQ96L93 1317 aa25.87■■□□□ 1.73
SDCBP-209ENST00000522243 TDRD3Q9H7E2 651 aaKnown RBP25.86■■□□□ 1.73
SDCBP-209ENST00000522243 SAGE1Q9NXZ1 904 aa25.85■■□□□ 1.73
SDCBP-209ENST00000522243 ZNF70Q9UC06 446 aaPredicted RBP25.85■■□□□ 1.73
SDCBP-209ENST00000522243 SERPINA10Q9UK55 444 aa25.85■■□□□ 1.73
SDCBP-209ENST00000522243 TNNQ9UQP3 1299 aa25.85■■□□□ 1.73
SDCBP-209ENST00000522243 SSC5DA1L4H1 1573 aa25.84■■□□□ 1.73
SDCBP-209ENST00000522243 SLC5A1P13866 664 aa25.84■■□□□ 1.73
SDCBP-209ENST00000522243 CRKP46108 304 aa25.84■■□□□ 1.73
SDCBP-209ENST00000522243 NBPF12Q5TAG4 269 aaPredicted RBP25.84■■□□□ 1.73
SDCBP-209ENST00000522243 DZIP1LQ8IYY4 767 aaKnown RBP25.84■■□□□ 1.73
SDCBP-209ENST00000522243 ARHGAP45Q92619 1136 aa25.84■■□□□ 1.73
SDCBP-209ENST00000522243 PA2G4Q9UQ80 394 aaKnown RBP25.84■■□□□ 1.73
SDCBP-209ENST00000522243 PPP2R3BQ9Y5P8 575 aa25.84■■□□□ 1.73
SDCBP-209ENST00000522243 MYH13Q9UKX3 1938 aa25.83■■□□□ 1.73
SDCBP-209ENST00000522243 BCAR3O75815 825 aa25.83■■□□□ 1.73
SDCBP-209ENST00000522243 HNRNPUQ00839 825 aaKnown RBP eCLIP25.83■■□□□ 1.73
SDCBP-209ENST00000522243 RASA3Q14644 834 aa25.83■■□□□ 1.73
SDCBP-209ENST00000522243 INTS3Q68E01 1043 aaKnown RBP25.83■■□□□ 1.73
SDCBP-209ENST00000522243 FRAT1Q92837 279 aaPredicted RBP25.83■■□□□ 1.73
SDCBP-209ENST00000522243 SPDYE2Q495Y8 402 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms