RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 DHX9Q08211 1270 aaKnown RBP7.86□□□□□ -1.15
SPIDR-216ENST00000521918 INTS5Q6P9B9 1019 aaKnown RBP7.86□□□□□ -1.15
SPIDR-216ENST00000521918 ZNF790Q6PG37 636 aa7.86□□□□□ -1.15
SPIDR-216ENST00000521918 DNAJC10Q8IXB1 793 aa7.86□□□□□ -1.15
SPIDR-216ENST00000521918 PPP1R12CQ9BZL4 782 aa7.86□□□□□ -1.15
SPIDR-216ENST00000521918 TMPRSS4Q9NRS4 437 aa7.86□□□□□ -1.15
SPIDR-216ENST00000521918 KDM3BQ7LBC6 1761 aa7.86□□□□□ -1.15
SPIDR-216ENST00000521918 SCN7AQ01118 1682 aa7.86□□□□□ -1.15
SPIDR-216ENST00000521918 HEG1Q9ULI3 1381 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 SOS1Q07889 1333 aaPredicted RBP7.85□□□□□ -1.15
SPIDR-216ENST00000521918 PALM3A6NDB9 673 aaPredicted RBP7.85□□□□□ -1.15
SPIDR-216ENST00000521918 HTATSF1O43719 755 aaKnown RBP7.85□□□□□ -1.15
SPIDR-216ENST00000521918 ATP9BO43861 1147 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 GYS1P13807 737 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 TIMP2P16035 220 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 TEFQ10587 303 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 MCM10Q7L590 875 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 CCDC82Q8N4S0 544 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 PLPP7Q8NBV4 271 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 ZNF784Q8NCA9 323 aaPredicted RBP7.85□□□□□ -1.15
SPIDR-216ENST00000521918 NLGN2Q8NFZ4 835 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 ZNF496Q96IT1 587 aaPredicted RBP7.85□□□□□ -1.15
SPIDR-216ENST00000521918 TFIP11Q9UBB9 837 aaKnown RBP7.85□□□□□ -1.15
SPIDR-216ENST00000521918 RTCBQ9Y3I0 505 aaKnown RBP7.85□□□□□ -1.15
SPIDR-216ENST00000521918 C10orf71Q711Q0 1435 aa7.85□□□□□ -1.15
SPIDR-216ENST00000521918 COL15A1P39059 1388 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 USP42Q9H9J4 1324 aaKnown RBP7.84□□□□□ -1.15
SPIDR-216ENST00000521918 KCNQ3O43525 872 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 LILRA1O75019 489 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 SKIP12755 728 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 DCTN1Q14203 1278 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 NFE2L2Q16236 605 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 MAP7D1Q3KQU3 841 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 ITPKCQ96DU7 683 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 CCDC87Q9NVE4 849 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 ZBTB1Q9Y2K1 713 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 PCDHB11Q9Y5F2 797 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 LAMB4A4D0S4 1761 aa7.84□□□□□ -1.15
SPIDR-216ENST00000521918 NRXN2Q9P2S2 1712 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 PXDNLA1KZ92 1463 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 LCE2BO14633 110 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 SCTRP47872 440 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 WDR4P57081 412 aaKnown RBP7.83□□□□□ -1.16
SPIDR-216ENST00000521918 ERVK-9P63128 1117 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 CTC1Q2NKJ3 1217 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 TRAPPC3LQ5T215 181 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 TTC5Q8N0Z6 440 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 CRIPAKQ8N1N5 446 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 SRP68Q9UHB9 627 aaKnown RBP7.83□□□□□ -1.16
SPIDR-216ENST00000521918 SERPINA10Q9UK55 444 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 DOLKQ9UPQ8 538 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 MAFBQ9Y5Q3 323 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-216ENST00000521918 BCORQ6W2J9 1755 aa7.83□□□□□ -1.16
SPIDR-216ENST00000521918 BTBD11A6QL63 1104 aa7.82□□□□□ -1.16
SPIDR-216ENST00000521918 USP17L5A8MUK1 530 aa7.82□□□□□ -1.16
SPIDR-216ENST00000521918 ZIC2O95409 532 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-216ENST00000521918 MMP10P09238 476 aa7.82□□□□□ -1.16
SPIDR-216ENST00000521918 SMCPP49901 116 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-216ENST00000521918 PLEKHM2Q8IWE5 1019 aa7.82□□□□□ -1.16
SPIDR-216ENST00000521918 FMNL2Q96PY5 1086 aa7.82□□□□□ -1.16
SPIDR-216ENST00000521918 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
SPIDR-216ENST00000521918 CD2APQ9Y5K6 639 aa7.82□□□□□ -1.16
SPIDR-216ENST00000521918 BRCA1P38398 1863 aaKnown RBP7.81□□□□□ -1.16
SPIDR-216ENST00000521918 PRAMEF22A3QJZ6 481 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 USP17L3A6NCW0 530 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 USP17L4A6NCW7 530 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 AXIN1O15169 862 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 RFC4P35249 363 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 ADD1P35611 737 aaKnown RBP7.81□□□□□ -1.16
SPIDR-216ENST00000521918 EIF5P55010 431 aaKnown RBP7.81□□□□□ -1.16
SPIDR-216ENST00000521918 DDR1Q08345 913 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 NCOA4Q13772 614 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 USP17L2Q6R6M4 530 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 USP17L1Q7RTZ2 530 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 NLGN1Q8N2Q7 840 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 RTF1Q92541 710 aaKnown RBP7.81□□□□□ -1.16
SPIDR-216ENST00000521918 CCDC97Q96F63 343 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-216ENST00000521918 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
SPIDR-216ENST00000521918 MAPK8IP3Q9UPT6 1336 aa7.8□□□□□ -1.16
SPIDR-216ENST00000521918 POLRMTO00411 1230 aaKnown RBP7.8□□□□□ -1.16
SPIDR-216ENST00000521918 ST8SIA5O15466 376 aa7.8□□□□□ -1.16
SPIDR-216ENST00000521918 STARD3NLO95772 234 aa7.8□□□□□ -1.16
SPIDR-216ENST00000521918 YBX3P16989 372 aaKnown RBP eCLIP7.8□□□□□ -1.16
SPIDR-216ENST00000521918 TMPOP42166 694 aaKnown RBP7.8□□□□□ -1.16
SPIDR-216ENST00000521918 TAF7Q15545 349 aaPredicted RBP7.8□□□□□ -1.16
SPIDR-216ENST00000521918 Q6ZVU0 165 aa7.8□□□□□ -1.16
SPIDR-216ENST00000521918 DEPDC4Q8N2C3 294 aa7.8□□□□□ -1.16
SPIDR-216ENST00000521918 THUMPD2Q9BTF0 503 aaKnown RBP7.8□□□□□ -1.16
SPIDR-216ENST00000521918 TEX13AQ9BXU3 409 aaPredicted RBP7.8□□□□□ -1.16
SPIDR-216ENST00000521918 CYLDQ9NQC7 956 aa7.8□□□□□ -1.16
SPIDR-216ENST00000521918 AAASQ9NRG9 546 aa7.8□□□□□ -1.16
SPIDR-216ENST00000521918 NARFQ9UHQ1 456 aa7.8□□□□□ -1.16
SPIDR-216ENST00000521918 AFDNP55196 1824 aaKnown RBP7.8□□□□□ -1.16
SPIDR-216ENST00000521918 N4BP2Q86UW6 1770 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-216ENST00000521918 CAPN5O15484 640 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-216ENST00000521918 LZTS3O60299 673 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-216ENST00000521918 TM4SF1P30408 202 aa7.79□□□□□ -1.16
SPIDR-216ENST00000521918 IL6STP40189 918 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-216ENST00000521918 CBLBQ13191 982 aa7.79□□□□□ -1.16
SPIDR-216ENST00000521918 OXLD1Q5BKU9 147 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms