RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 CCDC173Q0VFZ6 552 aa16.53■□□□□ 0.24
SMIM12-206ENST00000521580 VPS72Q15906 364 aa16.53■□□□□ 0.24
SMIM12-206ENST00000521580 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
SMIM12-206ENST00000521580 SPATA5Q8NB90 893 aa16.53■□□□□ 0.24
SMIM12-206ENST00000521580 TSPY26PQ9H489 355 aa16.53■□□□□ 0.24
SMIM12-206ENST00000521580 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
SMIM12-206ENST00000521580 TFIP11Q9UBB9 837 aaKnown RBP16.53■□□□□ 0.24
SMIM12-206ENST00000521580 WWC3Q9ULE0 1092 aa16.53■□□□□ 0.24
SMIM12-206ENST00000521580 MYH3P11055 1940 aa16.52■□□□□ 0.24
SMIM12-206ENST00000521580 CCDC183Q5T5S1 534 aa16.52■□□□□ 0.23
SMIM12-206ENST00000521580 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
SMIM12-206ENST00000521580 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
SMIM12-206ENST00000521580 PTPDC1A2A3K4 754 aa16.51■□□□□ 0.23
SMIM12-206ENST00000521580 UBE3CQ15386 1083 aa16.51■□□□□ 0.23
SMIM12-206ENST00000521580 AIDAQ96BJ3 306 aa16.51■□□□□ 0.23
SMIM12-206ENST00000521580 PRC1O43663 620 aa16.51■□□□□ 0.23
SMIM12-206ENST00000521580 BCAMP50895 628 aa16.51■□□□□ 0.23
SMIM12-206ENST00000521580 NSUN7Q8NE18 718 aaKnown RBP16.51■□□□□ 0.23
SMIM12-206ENST00000521580 NCOA7Q8NI08 942 aa16.51■□□□□ 0.23
SMIM12-206ENST00000521580 LLPHQ9BRT6 129 aaKnown RBP16.51■□□□□ 0.23
SMIM12-206ENST00000521580 AGXT2Q9BYV1 514 aa16.51■□□□□ 0.23
SMIM12-206ENST00000521580 RRAGDQ9NQL2 400 aaPredicted RBP16.51■□□□□ 0.23
SMIM12-206ENST00000521580 MYH14Q7Z406 1995 aaKnown RBP16.51■□□□□ 0.23
SMIM12-206ENST00000521580 PDIA3P30101 505 aaKnown RBP16.5■□□□□ 0.23
SMIM12-206ENST00000521580 CHRNDQ07001 517 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 ERFEQ4G0M1 354 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 TTC6Q86TZ1 520 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 MCM5P33992 734 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 TRDNQ13061 729 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 CLEC4GQ6UXB4 293 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 CDC5LQ99459 802 aaKnown RBP16.5■□□□□ 0.23
SMIM12-206ENST00000521580 GOLGA6L4A6NEF3 574 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 MAGEB6Q8N7X4 407 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 KIF3AQ9Y496 699 aa16.5■□□□□ 0.23
SMIM12-206ENST00000521580 HMGN5P82970 282 aaKnown RBP16.49■□□□□ 0.23
SMIM12-206ENST00000521580 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
SMIM12-206ENST00000521580 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
SMIM12-206ENST00000521580 SPATA32Q96LK8 384 aa16.49■□□□□ 0.23
SMIM12-206ENST00000521580 USP21Q9UK80 565 aa16.49■□□□□ 0.23
SMIM12-206ENST00000521580 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
SMIM12-206ENST00000521580 CTDNEP1O95476 244 aa16.49■□□□□ 0.23
SMIM12-206ENST00000521580 BCL9LQ86UU0 1499 aa16.49■□□□□ 0.23
SMIM12-206ENST00000521580 RAB11FIP4Q86YS3 637 aa16.49■□□□□ 0.23
SMIM12-206ENST00000521580 SCAND2PQ9GZW5 306 aaPredicted RBP16.49■□□□□ 0.23
SMIM12-206ENST00000521580 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
SMIM12-206ENST00000521580 ANKRD18AQ8IVF6 992 aa16.48■□□□□ 0.23
SMIM12-206ENST00000521580 KLF18A0A0U1RQI7 1052 aa16.48■□□□□ 0.23
SMIM12-206ENST00000521580 MB21D2Q8IYB1 491 aaPredicted RBP16.48■□□□□ 0.23
SMIM12-206ENST00000521580 C3orf67Q6ZVT6 689 aa16.47■□□□□ 0.23
SMIM12-206ENST00000521580 PPP1R9BQ96SB3 815 aa16.47■□□□□ 0.23
SMIM12-206ENST00000521580 GUCY1B3Q02153 619 aa16.47■□□□□ 0.23
SMIM12-206ENST00000521580 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
SMIM12-206ENST00000521580 MBD4O95243 580 aa16.47■□□□□ 0.23
SMIM12-206ENST00000521580 STRBPQ96SI9 672 aaKnown RBP16.47■□□□□ 0.23
SMIM12-206ENST00000521580 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
SMIM12-206ENST00000521580 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
SMIM12-206ENST00000521580 TCRBV5S4A2TA0A5A2 114 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 GNPATO15228 680 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 LETM1O95202 739 aaPredicted RBP16.46■□□□□ 0.23
SMIM12-206ENST00000521580 RESTQ13127 1097 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 TBC1D9BQ66K14 1250 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 GIMAP6Q6P9H5 292 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 CHMP4CQ96CF2 233 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 AKAP11Q9UKA4 1901 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 CEBPZQ03701 1054 aaKnown RBP16.46■□□□□ 0.23
SMIM12-206ENST00000521580 TBC1D10CQ8IV04 446 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 ARMT1Q9H993 441 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 DENND2AQ9ULE3 1009 aa16.46■□□□□ 0.23
SMIM12-206ENST00000521580 RTL9Q8NET4 1388 aa16.46■□□□□ 0.22
SMIM12-206ENST00000521580 ANTXR2P58335 489 aa16.46■□□□□ 0.22
SMIM12-206ENST00000521580 LEO1Q8WVC0 666 aaPredicted RBP16.46■□□□□ 0.22
SMIM12-206ENST00000521580 ZSCAN16Q9H4T2 348 aaPredicted RBP16.46■□□□□ 0.22
SMIM12-206ENST00000521580 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
SMIM12-206ENST00000521580 CCDC24Q8N4L8 307 aa16.45■□□□□ 0.22
SMIM12-206ENST00000521580 NAPBQ9H115 298 aa16.45■□□□□ 0.22
SMIM12-206ENST00000521580 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
SMIM12-206ENST00000521580 CPLX1O14810 134 aa16.45■□□□□ 0.22
SMIM12-206ENST00000521580 ZPR1O75312 459 aa16.45■□□□□ 0.22
SMIM12-206ENST00000521580 ABCF2Q9UG63 623 aa16.45■□□□□ 0.22
SMIM12-206ENST00000521580 LAMA4Q16363 1823 aa16.45■□□□□ 0.22
SMIM12-206ENST00000521580 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
SMIM12-206ENST00000521580 ESPNB1AK53 854 aa16.44■□□□□ 0.22
SMIM12-206ENST00000521580 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
SMIM12-206ENST00000521580 NBPF3Q9H094 633 aa16.44■□□□□ 0.22
SMIM12-206ENST00000521580 LRP5O75197 1615 aa16.44■□□□□ 0.22
SMIM12-206ENST00000521580 ELP1O95163 1332 aa16.44■□□□□ 0.22
SMIM12-206ENST00000521580 GYG1P46976 350 aa16.44■□□□□ 0.22
SMIM12-206ENST00000521580 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
SMIM12-206ENST00000521580 B4E1Z4 1266 aa16.44■□□□□ 0.22
SMIM12-206ENST00000521580 NPHP1O15259 732 aa16.44■□□□□ 0.22
SMIM12-206ENST00000521580 MEX3CQ5U5Q3 659 aaKnown RBP16.44■□□□□ 0.22
SMIM12-206ENST00000521580 NBPF5PQ86XG9 351 aaPredicted RBP16.44■□□□□ 0.22
SMIM12-206ENST00000521580 VPS37DQ86XT2 251 aa16.44■□□□□ 0.22
SMIM12-206ENST00000521580 ATRNO75882 1429 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 WTIPA6NIX2 430 aaPredicted RBP16.43■□□□□ 0.22
SMIM12-206ENST00000521580 DHX16O60231 1041 aaKnown RBP16.43■□□□□ 0.22
SMIM12-206ENST00000521580 LIG1P18858 919 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 FBXL16Q8N461 479 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 MIGA1Q8NAN2 632 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms