RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 MMP14P50281 582 aa21.32■■□□□ 1
TRAM1-203ENST00000520700 GTF2IP78347 998 aa21.32■■□□□ 1
TRAM1-203ENST00000520700 AGBL3Q8NEM8 1001 aa21.32■■□□□ 1
TRAM1-203ENST00000520700 DPF2Q92785 391 aa21.32■■□□□ 1
TRAM1-203ENST00000520700 L3MBTL3Q96JM7 780 aaPredicted RBP21.32■■□□□ 1
TRAM1-203ENST00000520700 MYO3BQ8WXR4 1341 aa21.31■■□□□ 1
TRAM1-203ENST00000520700 SALL3Q9BXA9 1300 aa21.31■■□□□ 1
TRAM1-203ENST00000520700 IGSF3O75054 1194 aa21.31■■□□□ 1
TRAM1-203ENST00000520700 ATP5JP18859 108 aa21.31■■□□□ 1
TRAM1-203ENST00000520700 RASGRF1Q13972 1273 aa21.31■■□□□ 1
TRAM1-203ENST00000520700 TTC39AQ5SRH9 613 aa21.31■■□□□ 1
TRAM1-203ENST00000520700 RSBN1LQ6PCB5 846 aaPredicted RBP21.31■■□□□ 1
TRAM1-203ENST00000520700 WDR66Q8TBY9 1149 aa21.31■■□□□ 1
TRAM1-203ENST00000520700 TBC1D22AQ8WUA7 517 aa21.31■■□□□ 1
TRAM1-203ENST00000520700 GMLQ99445 158 aa21.31■■□□□ 1
TRAM1-203ENST00000520700 SALL1Q9NSC2 1324 aa21.3■■□□□ 1
TRAM1-203ENST00000520700 SCN9AQ15858 1988 aa21.3■■□□□ 1
TRAM1-203ENST00000520700 TIAM2Q8IVF5 1701 aa21.3■■□□□ 1
TRAM1-203ENST00000520700 FRAT2O75474 233 aaPredicted RBP21.3■■□□□ 1
TRAM1-203ENST00000520700 B4GALNT3Q6L9W6 998 aa21.3■■□□□ 1
TRAM1-203ENST00000520700 C16orf71Q8IYS4 520 aaPredicted RBP21.3■■□□□ 1
TRAM1-203ENST00000520700 ECHDC1Q9NTX5 307 aa21.3■■□□□ 1
TRAM1-203ENST00000520700 HMG20BQ9P0W2 317 aa21.3■■□□□ 1
TRAM1-203ENST00000520700 STAP2Q9UGK3 403 aa21.3■■□□□ 1
TRAM1-203ENST00000520700 SUGT1Q9Y2Z0 365 aa21.3■■□□□ 1
TRAM1-203ENST00000520700 TTC41PQ6P2S7 1318 aa21.29■■□□□ 1
TRAM1-203ENST00000520700 DDNO94850 711 aaPredicted RBP21.29■■□□□ 1
TRAM1-203ENST00000520700 SPATA5Q8NB90 893 aa21.29■■□□□ 1
TRAM1-203ENST00000520700 GPATCH3Q96I76 525 aa21.29■■□□□ 1
TRAM1-203ENST00000520700 LNPKQ9C0E8 428 aa21.29■■□□□ 1
TRAM1-203ENST00000520700 IQSEC3Q9UPP2 1182 aaPredicted RBP21.29■■□□□ 1
TRAM1-203ENST00000520700 PSME4Q14997 1843 aa21.29■■□□□ 1
TRAM1-203ENST00000520700 MCAMP43121 646 aa21.28■■□□□ 1
TRAM1-203ENST00000520700 SCARF1Q14162 830 aa21.27■■□□□ 1
TRAM1-203ENST00000520700 OSBPL3Q9H4L5 887 aa21.27■■□□□ 1
TRAM1-203ENST00000520700 GJA3Q9Y6H8 435 aa21.27■■□□□ 1
TRAM1-203ENST00000520700 MX1P20591 662 aa21.26■□□□□ 0.99
TRAM1-203ENST00000520700 MFSD14BQ5SR56 506 aa21.26■□□□□ 0.99
TRAM1-203ENST00000520700 ZGPATQ8N5A5 531 aaKnown RBP21.26■□□□□ 0.99
TRAM1-203ENST00000520700 CERS5Q8N5B7 392 aa21.26■□□□□ 0.99
TRAM1-203ENST00000520700 MRIQ9BWK5 157 aa21.26■□□□□ 0.99
TRAM1-203ENST00000520700 COL1A1P02452 1464 aaPredicted RBP21.26■□□□□ 0.99
TRAM1-203ENST00000520700 GMPSP49915 693 aaPredicted RBP21.25■□□□□ 0.99
TRAM1-203ENST00000520700 CHAF1AQ13111 956 aaPredicted RBP21.25■□□□□ 0.99
TRAM1-203ENST00000520700 OTUD7AQ8TE49 926 aaPredicted RBP21.25■□□□□ 0.99
TRAM1-203ENST00000520700 AOX1Q06278 1338 aa21.25■□□□□ 0.99
TRAM1-203ENST00000520700 ERC2O15083 957 aa21.24■□□□□ 0.99
TRAM1-203ENST00000520700 SCNN1DP51172 638 aa21.24■□□□□ 0.99
TRAM1-203ENST00000520700 PDE1AP54750 535 aa21.24■□□□□ 0.99
TRAM1-203ENST00000520700 ZNF280AP59817 542 aaPredicted RBP21.24■□□□□ 0.99
TRAM1-203ENST00000520700 PLEKHM2Q8IWE5 1019 aa21.24■□□□□ 0.99
TRAM1-203ENST00000520700 HAUS7Q99871 368 aa21.24■□□□□ 0.99
TRAM1-203ENST00000520700 GPRC5DQ9NZD1 345 aa21.24■□□□□ 0.99
TRAM1-203ENST00000520700 ZBTB12Q9Y330 459 aaPredicted RBP21.24■□□□□ 0.99
TRAM1-203ENST00000520700 ZNF646O15015 1829 aaPredicted RBP21.24■□□□□ 0.99
TRAM1-203ENST00000520700 POTECB2RU33 542 aa21.23■□□□□ 0.99
TRAM1-203ENST00000520700 GLRX3O76003 335 aaKnown RBP21.23■□□□□ 0.99
TRAM1-203ENST00000520700 SPTY2D1Q68D10 685 aaPredicted RBP21.23■□□□□ 0.99
TRAM1-203ENST00000520700 TMED8Q6PL24 325 aaPredicted RBP21.23■□□□□ 0.99
TRAM1-203ENST00000520700 PI16Q6UXB8 463 aa21.23■□□□□ 0.99
TRAM1-203ENST00000520700 PI4K2BQ8TCG2 481 aa21.23■□□□□ 0.99
TRAM1-203ENST00000520700 FBXW7Q969H0 707 aa21.23■□□□□ 0.99
TRAM1-203ENST00000520700 AKAP11Q9UKA4 1901 aa21.23■□□□□ 0.99
TRAM1-203ENST00000520700 WDR90Q96KV7 1748 aa21.22■□□□□ 0.99
TRAM1-203ENST00000520700 IQCA1LA6NCM1 817 aa21.22■□□□□ 0.99
TRAM1-203ENST00000520700 CYP2E1P05181 493 aaPredicted RBP21.22■□□□□ 0.99
TRAM1-203ENST00000520700 USP17L8P0C7I0 530 aa21.22■□□□□ 0.99
TRAM1-203ENST00000520700 YY1P25490 414 aa21.22■□□□□ 0.99
TRAM1-203ENST00000520700 ZAP70P43403 619 aa21.22■□□□□ 0.99
TRAM1-203ENST00000520700 HDLBPQ00341 1268 aaKnown RBP21.22■□□□□ 0.99
TRAM1-203ENST00000520700 TTF1Q15361 905 aaPredicted RBP21.22■□□□□ 0.99
TRAM1-203ENST00000520700 MXD3Q9BW11 206 aa21.22■□□□□ 0.99
TRAM1-203ENST00000520700 BCL11AQ9H165 835 aa21.22■□□□□ 0.99
TRAM1-203ENST00000520700 CNOT7Q9UIV1 285 aaKnown RBP21.22■□□□□ 0.99
TRAM1-203ENST00000520700 JAG2Q9Y219 1238 aa21.22■□□□□ 0.99
TRAM1-203ENST00000520700 PDE4AP27815 886 aa21.21■□□□□ 0.99
TRAM1-203ENST00000520700 BOLA2Q9H3K6 86 aa21.21■□□□□ 0.99
TRAM1-203ENST00000520700 SNRKQ9NRH2 765 aa21.21■□□□□ 0.99
TRAM1-203ENST00000520700 H7C1D1 291 aa21.2■□□□□ 0.98
TRAM1-203ENST00000520700 VEGFAP15692 232 aaPredicted RBP21.2■□□□□ 0.98
TRAM1-203ENST00000520700 LMOD1P29536 600 aaPredicted RBP21.2■□□□□ 0.98
TRAM1-203ENST00000520700 OGFOD1Q8N543 542 aa21.2■□□□□ 0.98
TRAM1-203ENST00000520700 HACL1Q9UJ83 578 aa21.2■□□□□ 0.98
TRAM1-203ENST00000520700 HDAC9Q9UKV0 1011 aa21.2■□□□□ 0.98
TRAM1-203ENST00000520700 MAST3O60307 1309 aa21.2■□□□□ 0.98
TRAM1-203ENST00000520700 LDHBP07195 334 aaKnown RBP21.19■□□□□ 0.98
TRAM1-203ENST00000520700 GRIK5Q16478 980 aa21.19■□□□□ 0.98
TRAM1-203ENST00000520700 ERICH6Q7L0X2 663 aa21.19■□□□□ 0.98
TRAM1-203ENST00000520700 TICAM2Q86XR7 235 aa21.19■□□□□ 0.98
TRAM1-203ENST00000520700 MICALL2Q8IY33 904 aa21.19■□□□□ 0.98
TRAM1-203ENST00000520700 MTMR14Q8NCE2 650 aa21.19■□□□□ 0.98
TRAM1-203ENST00000520700 FAM163AQ96GL9 167 aaPredicted RBP21.19■□□□□ 0.98
TRAM1-203ENST00000520700 SERPINA10Q9UK55 444 aa21.19■□□□□ 0.98
TRAM1-203ENST00000520700 PRDX5P30044 214 aa21.18■□□□□ 0.98
TRAM1-203ENST00000520700 EPS15P42566 896 aa21.18■□□□□ 0.98
TRAM1-203ENST00000520700 TBC1D9Q6ZT07 1266 aa21.18■□□□□ 0.98
TRAM1-203ENST00000520700 KIAA0825Q8IV33 1275 aa21.18■□□□□ 0.98
TRAM1-203ENST00000520700 ADARB2Q9NS39 739 aaKnown RBP21.18■□□□□ 0.98
TRAM1-203ENST00000520700 PAG1Q9NWQ8 432 aa21.18■□□□□ 0.98
TRAM1-203ENST00000520700 ABCF2Q9UG63 623 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms