RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 TPCN1Q9ULQ1 816 aa32.05■■■□□ 2.72
COL13A1-212ENST00000520133 SMC3Q9UQE7 1217 aa32.05■■■□□ 2.72
COL13A1-212ENST00000520133 ZDHHC9Q9Y397 364 aa32.05■■■□□ 2.72
COL13A1-212ENST00000520133 ME3Q16798 604 aa32.04■■■□□ 2.72
COL13A1-212ENST00000520133 IMMTQ16891 758 aaKnown RBP32.04■■■□□ 2.72
COL13A1-212ENST00000520133 WWC3Q9ULE0 1092 aa32.04■■■□□ 2.72
COL13A1-212ENST00000520133 BRD1O95696 1058 aa32.03■■■□□ 2.72
COL13A1-212ENST00000520133 TM4SF1P30408 202 aa32.03■■■□□ 2.72
COL13A1-212ENST00000520133 DEKP35659 375 aaKnown RBP32.03■■■□□ 2.72
COL13A1-212ENST00000520133 CCDC83Q8IWF9 413 aa32.03■■■□□ 2.72
COL13A1-212ENST00000520133 TCEANC2Q96MN5 208 aa32.03■■■□□ 2.72
COL13A1-212ENST00000520133 TCRBV5S4A2TA0A5A2 114 aa32.03■■■□□ 2.72
COL13A1-212ENST00000520133 COL9A3Q14050 684 aaPredicted RBP32.03■■■□□ 2.72
COL13A1-212ENST00000520133 TOB2Q14106 344 aaPredicted RBP32.03■■■□□ 2.72
COL13A1-212ENST00000520133 STOX1Q6ZVD7 989 aa32.03■■■□□ 2.72
COL13A1-212ENST00000520133 PLSCR1O15162 318 aa32.02■■■□□ 2.72
COL13A1-212ENST00000520133 TRAK2O60296 914 aa32.02■■■□□ 2.72
COL13A1-212ENST00000520133 DHX32Q7L7V1 743 aaKnown RBP32.02■■■□□ 2.72
COL13A1-212ENST00000520133 VPS37DQ86XT2 251 aa32.02■■■□□ 2.72
COL13A1-212ENST00000520133 PROM2Q8N271 834 aa32.02■■■□□ 2.72
COL13A1-212ENST00000520133 E7EWF7 191 aa32.01■■■□□ 2.72
COL13A1-212ENST00000520133 FGAP02671 866 aa32.01■■■□□ 2.72
COL13A1-212ENST00000520133 PRR5LQ6MZQ0 368 aa32.01■■■□□ 2.72
COL13A1-212ENST00000520133 FOXP2O15409 715 aa32■■■□□ 2.71
COL13A1-212ENST00000520133 RXRBP28702 533 aa32■■■□□ 2.71
COL13A1-212ENST00000520133 GYG1P46976 350 aa32■■■□□ 2.71
COL13A1-212ENST00000520133 ST5P78524 1137 aa32■■■□□ 2.71
COL13A1-212ENST00000520133 AIDAQ96BJ3 306 aa32■■■□□ 2.71
COL13A1-212ENST00000520133 WDR33Q9C0J8 1336 aaKnown RBP32■■■□□ 2.71
COL13A1-212ENST00000520133 MAGEB6Q8N7X4 407 aa32■■■□□ 2.71
COL13A1-212ENST00000520133 SKOR2Q2VWA4 1001 aaPredicted RBP31.99■■■□□ 2.71
COL13A1-212ENST00000520133 TTLL5Q6EMB2 1281 aa31.99■■■□□ 2.71
COL13A1-212ENST00000520133 Q6ZUG5 572 aa31.99■■■□□ 2.71
COL13A1-212ENST00000520133 SERPINB2P05120 415 aa31.98■■■□□ 2.71
COL13A1-212ENST00000520133 FGD1P98174 961 aa31.98■■■□□ 2.71
COL13A1-212ENST00000520133 GRAPQ13588 217 aa31.98■■■□□ 2.71
COL13A1-212ENST00000520133 GRAPLQ8TC17 118 aaPredicted RBP31.98■■■□□ 2.71
COL13A1-212ENST00000520133 LRP2BPQ9P2M1 347 aa31.98■■■□□ 2.71
COL13A1-212ENST00000520133 DENND2AQ9ULE3 1009 aa31.98■■■□□ 2.71
COL13A1-212ENST00000520133 SEMA3EO15041 775 aa31.97■■■□□ 2.71
COL13A1-212ENST00000520133 FAM84BQ96KN1 310 aaPredicted RBP31.97■■■□□ 2.71
COL13A1-212ENST00000520133 MYH13Q9UKX3 1938 aa31.97■■■□□ 2.71
COL13A1-212ENST00000520133 APBA3O96018 575 aa31.96■■■□□ 2.71
COL13A1-212ENST00000520133 ZNF213O14771 459 aa31.96■■■□□ 2.71
COL13A1-212ENST00000520133 NECAB1Q8N987 351 aa31.96■■■□□ 2.71
COL13A1-212ENST00000520133 A0A0G2JLW4 131 aa31.95■■■□□ 2.7
COL13A1-212ENST00000520133 FBXO33Q7Z6M2 555 aa31.95■■■□□ 2.7
COL13A1-212ENST00000520133 STRBPQ96SI9 672 aaKnown RBP31.95■■■□□ 2.7
COL13A1-212ENST00000520133 IQSEC3Q9UPP2 1182 aaPredicted RBP31.95■■■□□ 2.7
COL13A1-212ENST00000520133 GJB2P29033 226 aa31.94■■■□□ 2.7
COL13A1-212ENST00000520133 EXOSC10Q01780 885 aaKnown RBP31.94■■■□□ 2.7
COL13A1-212ENST00000520133 MCTP1Q6DN14 999 aa31.94■■■□□ 2.7
COL13A1-212ENST00000520133 RPGRQ92834 1020 aaKnown RBP31.94■■■□□ 2.7
COL13A1-212ENST00000520133 TFCP2L1Q9NZI6 479 aa31.94■■■□□ 2.7
COL13A1-212ENST00000520133 APPP05067 770 aa31.93■■■□□ 2.7
COL13A1-212ENST00000520133 ST3GAL1Q11201 340 aa31.93■■■□□ 2.7
COL13A1-212ENST00000520133 WTIPA6NIX2 430 aaPredicted RBP31.93■■■□□ 2.7
COL13A1-212ENST00000520133 PDIA4P13667 645 aaKnown RBP31.93■■■□□ 2.7
COL13A1-212ENST00000520133 HAND2P61296 217 aa31.93■■■□□ 2.7
COL13A1-212ENST00000520133 FOXD4L5Q5VV16 416 aaPredicted RBP31.92■■■□□ 2.7
COL13A1-212ENST00000520133 FOXD4L4Q8WXT5 416 aaPredicted RBP31.92■■■□□ 2.7
COL13A1-212ENST00000520133 BRF1Q92994 677 aa31.92■■■□□ 2.7
COL13A1-212ENST00000520133 GNAT2P19087 354 aa31.91■■■□□ 2.7
COL13A1-212ENST00000520133 HIBADHP31937 336 aaKnown RBP31.91■■■□□ 2.7
COL13A1-212ENST00000520133 AGXT2Q9BYV1 514 aa31.91■■■□□ 2.7
COL13A1-212ENST00000520133 ABCF2Q9UG63 623 aa31.91■■■□□ 2.7
COL13A1-212ENST00000520133 PATL2C9JE40 543 aaKnown RBP31.91■■■□□ 2.7
COL13A1-212ENST00000520133 STX6O43752 255 aa31.91■■■□□ 2.7
COL13A1-212ENST00000520133 MBD4O95243 580 aa31.91■■■□□ 2.7
COL13A1-212ENST00000520133 SYT1P21579 422 aa31.91■■■□□ 2.7
COL13A1-212ENST00000520133 ALX1Q15699 326 aa31.91■■■□□ 2.7
COL13A1-212ENST00000520133 CRY2Q49AN0 593 aa31.91■■■□□ 2.7
COL13A1-212ENST00000520133 ZMYM6O95789 1325 aa31.91■■■□□ 2.7
COL13A1-212ENST00000520133 PDS5AQ29RF7 1337 aaKnown RBP31.91■■■□□ 2.7
COL13A1-212ENST00000520133 NCOA7Q8NI08 942 aa31.9■■■□□ 2.7
COL13A1-212ENST00000520133 RBM17Q96I25 401 aaKnown RBP31.89■■■□□ 2.7
COL13A1-212ENST00000520133 LRRC2Q9BYS8 371 aa31.89■■■□□ 2.7
COL13A1-212ENST00000520133 RAI14Q9P0K7 980 aa31.89■■■□□ 2.7
COL13A1-212ENST00000520133 LEMD3Q9Y2U8 911 aa31.89■■■□□ 2.7
COL13A1-212ENST00000520133 COL1A1P02452 1464 aaPredicted RBP31.89■■■□□ 2.69
COL13A1-212ENST00000520133 PNPLA7Q6ZV29 1317 aa31.89■■■□□ 2.69
COL13A1-212ENST00000520133 POLRMTO00411 1230 aaKnown RBP31.89■■■□□ 2.69
COL13A1-212ENST00000520133 RALYLQ86SE5 291 aaKnown RBP31.89■■■□□ 2.69
COL13A1-212ENST00000520133 FBXL16Q8N461 479 aa31.89■■■□□ 2.69
COL13A1-212ENST00000520133 FLAD1Q8NFF5 587 aa31.89■■■□□ 2.69
COL13A1-212ENST00000520133 GTF3C6Q969F1 213 aa31.89■■■□□ 2.69
COL13A1-212ENST00000520133 AKT1S1Q96B36 256 aa31.89■■■□□ 2.69
COL13A1-212ENST00000520133 ANKIB1Q9P2G1 1089 aa31.89■■■□□ 2.69
COL13A1-212ENST00000520133 STK3Q13188 491 aa31.88■■■□□ 2.69
COL13A1-212ENST00000520133 ZBTB22O15209 634 aa31.87■■■□□ 2.69
COL13A1-212ENST00000520133 ZSCAN22P10073 491 aaPredicted RBP31.87■■■□□ 2.69
COL13A1-212ENST00000520133 MCM5P33992 734 aa31.87■■■□□ 2.69
COL13A1-212ENST00000520133 DDR1Q08345 913 aa31.87■■■□□ 2.69
COL13A1-212ENST00000520133 TRDNQ13061 729 aa31.87■■■□□ 2.69
COL13A1-212ENST00000520133 ARMT1Q9H993 441 aa31.87■■■□□ 2.69
COL13A1-212ENST00000520133 XDHP47989 1333 aa31.87■■■□□ 2.69
COL13A1-212ENST00000520133 PDCP20941 246 aa31.86■■■□□ 2.69
COL13A1-212ENST00000520133 CYP7A1P22680 504 aa31.86■■■□□ 2.69
COL13A1-212ENST00000520133 KLRK1P26718 216 aa31.86■■■□□ 2.69
COL13A1-212ENST00000520133 ZNF827Q17R98 1081 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms