RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 RPS26P11Q5JNZ5 115 aaPredicted RBP9.04□□□□□ -0.96
NPM1-206ENST00000519955 ADAMTSL4Q6UY14 1074 aa9.04□□□□□ -0.96
NPM1-206ENST00000519955 C3orf58Q8NDZ4 430 aa9.04□□□□□ -0.96
NPM1-206ENST00000519955 CRELD1Q96HD1 420 aa9.04□□□□□ -0.96
NPM1-206ENST00000519955 MKL2Q9ULH7 1088 aa9.04□□□□□ -0.96
NPM1-206ENST00000519955 PPM1HQ9ULR3 514 aa9.04□□□□□ -0.96
NPM1-206ENST00000519955 LINC00114Q6XXX2 140 aa9.03□□□□□ -0.96
NPM1-206ENST00000519955 PODNQ7Z5L7 613 aa9.03□□□□□ -0.96
NPM1-206ENST00000519955 CLEC4MQ9H2X3 399 aaPredicted RBP9.03□□□□□ -0.96
NPM1-206ENST00000519955 ZNF576Q9H609 170 aa9.03□□□□□ -0.96
NPM1-206ENST00000519955 SH2B1Q9NRF2 756 aaPredicted RBP9.03□□□□□ -0.96
NPM1-206ENST00000519955 KIAA1522Q9P206 1035 aaPredicted RBP9.03□□□□□ -0.96
NPM1-206ENST00000519955 PPME1Q9Y570 386 aa9.03□□□□□ -0.96
NPM1-206ENST00000519955 H3BRJ5 948 aa9.02□□□□□ -0.97
NPM1-206ENST00000519955 GNB5O14775 395 aa9.02□□□□□ -0.97
NPM1-206ENST00000519955 EPHA1P21709 976 aa9.02□□□□□ -0.97
NPM1-206ENST00000519955 SNRPNP63162 240 aaKnown RBP9.02□□□□□ -0.97
NPM1-206ENST00000519955 KCNMA1Q12791 1236 aa9.02□□□□□ -0.97
NPM1-206ENST00000519955 FAM117BQ6P1L5 589 aa9.02□□□□□ -0.97
NPM1-206ENST00000519955 VN1R5Q7Z5H4 357 aa9.02□□□□□ -0.97
NPM1-206ENST00000519955 ANKRD24Q8TF21 1146 aa9.02□□□□□ -0.97
NPM1-206ENST00000519955 ADAMTS8Q9UP79 889 aa9.02□□□□□ -0.97
NPM1-206ENST00000519955 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.97
NPM1-206ENST00000519955 E9PSI1 815 aa9.01□□□□□ -0.97
NPM1-206ENST00000519955 CTSHP09668 335 aa9.01□□□□□ -0.97
NPM1-206ENST00000519955 ILDR2Q71H61 639 aa9.01□□□□□ -0.97
NPM1-206ENST00000519955 SRA1Q9HD15 236 aaKnown RBP9.01□□□□□ -0.97
NPM1-206ENST00000519955 SPDYE3A6NKU9 549 aa9□□□□□ -0.97
NPM1-206ENST00000519955 PCDH1Q08174 1060 aa9□□□□□ -0.97
NPM1-206ENST00000519955 IKBKEQ14164 716 aa9□□□□□ -0.97
NPM1-206ENST00000519955 MAP4K3Q8IVH8 894 aa9□□□□□ -0.97
NPM1-206ENST00000519955 DMRTC2Q8IXT2 367 aaPredicted RBP9□□□□□ -0.97
NPM1-206ENST00000519955 DTWD1Q8N5C7 304 aa9□□□□□ -0.97
NPM1-206ENST00000519955 BEND7Q8N7W2 519 aaPredicted RBP9□□□□□ -0.97
NPM1-206ENST00000519955 WNT8BQ93098 351 aa9□□□□□ -0.97
NPM1-206ENST00000519955 EIF4EBP3O60516 100 aaPredicted RBP8.99□□□□□ -0.97
NPM1-206ENST00000519955 ST13P50502 369 aaKnown RBP8.99□□□□□ -0.97
NPM1-206ENST00000519955 PIP4K2BP78356 416 aa8.99□□□□□ -0.97
NPM1-206ENST00000519955 TAF1CQ15572 869 aaPredicted RBP8.99□□□□□ -0.97
NPM1-206ENST00000519955 TRAPPC3LQ5T215 181 aa8.99□□□□□ -0.97
NPM1-206ENST00000519955 DCAF11Q8TEB1 546 aa8.99□□□□□ -0.97
NPM1-206ENST00000519955 TRIM11Q96F44 468 aa8.99□□□□□ -0.97
NPM1-206ENST00000519955 CEP44Q9C0F1 390 aa8.99□□□□□ -0.97
NPM1-206ENST00000519955 NOP53Q9NZM5 478 aaKnown RBP8.99□□□□□ -0.97
NPM1-206ENST00000519955 TTF2Q9UNY4 1162 aaKnown RBP8.99□□□□□ -0.97
NPM1-206ENST00000519955 LINC01387J3KSC0 135 aa8.98□□□□□ -0.97
NPM1-206ENST00000519955 RECKO95980 971 aa8.98□□□□□ -0.97
NPM1-206ENST00000519955 B3GALT4O96024 378 aa8.98□□□□□ -0.97
NPM1-206ENST00000519955 ESRRAP11474 423 aaPredicted RBP8.98□□□□□ -0.97
NPM1-206ENST00000519955 ARL4DP49703 201 aa8.98□□□□□ -0.97
NPM1-206ENST00000519955 TSNAXIP1Q2TAA8 658 aa8.98□□□□□ -0.97
NPM1-206ENST00000519955 NPM2Q86SE8 214 aaKnown RBP8.98□□□□□ -0.97
NPM1-206ENST00000519955 SCARF2Q96GP6 870 aaPredicted RBP8.98□□□□□ -0.97
NPM1-206ENST00000519955 PLVAPQ9BX97 442 aa8.98□□□□□ -0.97
NPM1-206ENST00000519955 BACH2Q9BYV9 841 aa8.98□□□□□ -0.97
NPM1-206ENST00000519955 SOX17Q9H6I2 414 aaPredicted RBP8.98□□□□□ -0.97
NPM1-206ENST00000519955 USP31Q70CQ4 1352 aa8.98□□□□□ -0.97
NPM1-206ENST00000519955 RAC1P63000 192 aa8.97□□□□□ -0.97
NPM1-206ENST00000519955 DDX54Q8TDD1 881 aaKnown RBP8.97□□□□□ -0.97
NPM1-206ENST00000519955 OSGEPQ9NPF4 335 aa8.97□□□□□ -0.97
NPM1-206ENST00000519955 SOX1O00570 391 aaPredicted RBP8.96□□□□□ -0.98
NPM1-206ENST00000519955 FSCN2O14926 492 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 CDC25BP30305 580 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 PPP2R3AQ06190 1150 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 ZNF423Q2M1K9 1284 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 MEI1Q5TIA1 1274 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 TXNDC11Q6PKC3 985 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 KLHL23Q8NBE8 558 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 TMEM87AQ8NBN3 555 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 SEC31BQ9NQW1 1179 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 GPN3Q9UHW5 284 aaPredicted RBP8.96□□□□□ -0.98
NPM1-206ENST00000519955 CNTNAP5Q8WYK1 1306 aa8.96□□□□□ -0.98
NPM1-206ENST00000519955 A0A0A0MRY4 1105 aa8.95□□□□□ -0.98
NPM1-206ENST00000519955 C19orf57Q0VDD7 668 aa8.95□□□□□ -0.98
NPM1-206ENST00000519955 FAAP100Q0VG06 881 aa8.95□□□□□ -0.98
NPM1-206ENST00000519955 TRIM28Q13263 835 aaKnown RBP8.95□□□□□ -0.98
NPM1-206ENST00000519955 SETDB1Q15047 1291 aa8.95□□□□□ -0.98
NPM1-206ENST00000519955 LDLRAD1Q5T700 205 aa8.95□□□□□ -0.98
NPM1-206ENST00000519955 TPTE2Q6XPS3 522 aa8.95□□□□□ -0.98
NPM1-206ENST00000519955 SV2BQ7L1I2 683 aa8.95□□□□□ -0.98
NPM1-206ENST00000519955 SLC7A3Q8WY07 619 aa8.95□□□□□ -0.98
NPM1-206ENST00000519955 TMEM39AQ9NV64 488 aa8.95□□□□□ -0.98
NPM1-206ENST00000519955 SCAMP3O14828 347 aaKnown RBP8.94□□□□□ -0.98
NPM1-206ENST00000519955 PRRT3Q5FWE3 981 aa8.94□□□□□ -0.98
NPM1-206ENST00000519955 FBXO11Q86XK2 927 aa8.94□□□□□ -0.98
NPM1-206ENST00000519955 FMR1NBQ8N0W7 255 aaPredicted RBP8.94□□□□□ -0.98
NPM1-206ENST00000519955 NECAB3Q96P71 396 aaPredicted RBP8.94□□□□□ -0.98
NPM1-206ENST00000519955 NOC4LQ9BVI4 516 aaKnown RBP8.94□□□□□ -0.98
NPM1-206ENST00000519955 METTL5Q9NRN9 209 aaKnown RBP8.94□□□□□ -0.98
NPM1-206ENST00000519955 DEAF1O75398 565 aaPredicted RBP8.93□□□□□ -0.98
NPM1-206ENST00000519955 CCDC85BQ15834 202 aaPredicted RBP8.93□□□□□ -0.98
NPM1-206ENST00000519955 FBXO24O75426 580 aa8.92□□□□□ -0.98
NPM1-206ENST00000519955 RASSF7Q02833 373 aa8.92□□□□□ -0.98
NPM1-206ENST00000519955 CARD10Q9BWT7 1032 aa8.92□□□□□ -0.98
NPM1-206ENST00000519955 ENC1O14682 589 aa8.91□□□□□ -0.98
NPM1-206ENST00000519955 RLBP1P12271 317 aa8.91□□□□□ -0.98
NPM1-206ENST00000519955 ELNP15502 786 aa8.91□□□□□ -0.98
NPM1-206ENST00000519955 GSTM4Q03013 218 aa8.91□□□□□ -0.98
NPM1-206ENST00000519955 AP3B2Q13367 1082 aa8.91□□□□□ -0.98
NPM1-206ENST00000519955 TMEM151AQ8N4L1 468 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms