RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.33□□□□□ -1.08
PCM1-213ENST00000519802 PATL2C9JE40 543 aaKnown RBP8.32□□□□□ -1.08
PCM1-213ENST00000519802 NFKBIEO00221 500 aa8.32□□□□□ -1.08
PCM1-213ENST00000519802 NLRP12P59046 1061 aa8.32□□□□□ -1.08
PCM1-213ENST00000519802 PHLDB3Q6NSJ2 640 aa8.32□□□□□ -1.08
PCM1-213ENST00000519802 ZNF438Q7Z4V0 828 aa8.32□□□□□ -1.08
PCM1-213ENST00000519802 NUDT16Q96DE0 195 aaKnown RBP8.32□□□□□ -1.08
PCM1-213ENST00000519802 GZF1Q9H116 711 aaPredicted RBP8.32□□□□□ -1.08
PCM1-213ENST00000519802 SALL4Q9UJQ4 1053 aa8.32□□□□□ -1.08
PCM1-213ENST00000519802 ACPPP15309 386 aa8.31□□□□□ -1.08
PCM1-213ENST00000519802 RUSC1Q9BVN2 902 aa8.31□□□□□ -1.08
PCM1-213ENST00000519802 ADGRE2Q9UHX3 823 aa8.31□□□□□ -1.08
PCM1-213ENST00000519802 WDR64B1ANS9 1081 aa8.3□□□□□ -1.08
PCM1-213ENST00000519802 FDX2Q6P4F2 183 aa8.3□□□□□ -1.08
PCM1-213ENST00000519802 DZANK1Q9NVP4 752 aa8.3□□□□□ -1.08
PCM1-213ENST00000519802 MEGF11A6BM72 1044 aa8.29□□□□□ -1.08
PCM1-213ENST00000519802 HOXA10P31260 410 aaPredicted RBP8.29□□□□□ -1.08
PCM1-213ENST00000519802 XKR5Q6UX68 686 aa8.29□□□□□ -1.08
PCM1-213ENST00000519802 ATCAYQ86WG3 371 aa8.29□□□□□ -1.08
PCM1-213ENST00000519802 C1orf127Q8N9H9 656 aa8.29□□□□□ -1.08
PCM1-213ENST00000519802 CCER1Q8TC90 406 aaPredicted RBP8.29□□□□□ -1.08
PCM1-213ENST00000519802 SLC7A3Q8WY07 619 aa8.29□□□□□ -1.08
PCM1-213ENST00000519802 MFSD14AQ96MC6 490 aa8.29□□□□□ -1.08
PCM1-213ENST00000519802 SOX13Q9UN79 622 aa8.29□□□□□ -1.08
PCM1-213ENST00000519802 PDE2AO00408 941 aaPredicted RBP8.28□□□□□ -1.08
PCM1-213ENST00000519802 ABL1P00519 1130 aa8.28□□□□□ -1.08
PCM1-213ENST00000519802 CES1P23141 567 aa8.28□□□□□ -1.08
PCM1-213ENST00000519802 SERPINB4P48594 390 aa8.28□□□□□ -1.08
PCM1-213ENST00000519802 HHIPQ96QV1 700 aa8.28□□□□□ -1.08
PCM1-213ENST00000519802 PIM2Q9P1W9 311 aa8.28□□□□□ -1.08
PCM1-213ENST00000519802 MTMR7Q9Y216 660 aa8.28□□□□□ -1.08
PCM1-213ENST00000519802 GAS2O43903 313 aaKnown RBP8.27□□□□□ -1.09
PCM1-213ENST00000519802 RPLP1P05386 114 aaKnown RBP8.27□□□□□ -1.09
PCM1-213ENST00000519802 MAP4P27816 1152 aaKnown RBP8.27□□□□□ -1.09
PCM1-213ENST00000519802 C19orf57Q0VDD7 668 aa8.27□□□□□ -1.09
PCM1-213ENST00000519802 SGO2Q562F6 1265 aa8.27□□□□□ -1.09
PCM1-213ENST00000519802 HGSNATQ68CP4 663 aa8.27□□□□□ -1.09
PCM1-213ENST00000519802 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
PCM1-213ENST00000519802 TRPA1O75762 1119 aa8.26□□□□□ -1.09
PCM1-213ENST00000519802 ARL4DP49703 201 aa8.26□□□□□ -1.09
PCM1-213ENST00000519802 EDEM1Q92611 657 aa8.26□□□□□ -1.09
PCM1-213ENST00000519802 ANO2Q9NQ90 1003 aa8.26□□□□□ -1.09
PCM1-213ENST00000519802 ZNF211Q13398 564 aaPredicted RBP8.25□□□□□ -1.09
PCM1-213ENST00000519802 TXNDC2Q86VQ3 553 aa8.25□□□□□ -1.09
PCM1-213ENST00000519802 ABI1Q8IZP0 508 aa8.25□□□□□ -1.09
PCM1-213ENST00000519802 TMEM102Q8N9M5 508 aaPredicted RBP8.25□□□□□ -1.09
PCM1-213ENST00000519802 TMPRSS13Q9BYE2 586 aa8.25□□□□□ -1.09
PCM1-213ENST00000519802 ATG3Q9NT62 314 aa8.25□□□□□ -1.09
PCM1-213ENST00000519802 LEMD3Q9Y2U8 911 aa8.25□□□□□ -1.09
PCM1-213ENST00000519802 F13BP05160 661 aa8.24□□□□□ -1.09
PCM1-213ENST00000519802 MSMPQ1L6U9 139 aa8.24□□□□□ -1.09
PCM1-213ENST00000519802 NUTM2GQ5VZR2 741 aa8.24□□□□□ -1.09
PCM1-213ENST00000519802 SMG8Q8ND04 991 aaKnown RBP8.24□□□□□ -1.09
PCM1-213ENST00000519802 GIMAP7Q8NHV1 300 aa8.24□□□□□ -1.09
PCM1-213ENST00000519802 CHRDQ9H2X0 955 aa8.24□□□□□ -1.09
PCM1-213ENST00000519802 GGNBP2Q9H3C7 697 aa8.24□□□□□ -1.09
PCM1-213ENST00000519802 SUGCTQ9HAC7 445 aa8.24□□□□□ -1.09
PCM1-213ENST00000519802 SOX1O00570 391 aaPredicted RBP8.23□□□□□ -1.09
PCM1-213ENST00000519802 TIAF1O95411 115 aa8.23□□□□□ -1.09
PCM1-213ENST00000519802 FOSL1P15407 271 aa8.23□□□□□ -1.09
PCM1-213ENST00000519802 DNM1Q05193 864 aaKnown RBP8.23□□□□□ -1.09
PCM1-213ENST00000519802 TMCO4Q5TGY1 634 aa8.23□□□□□ -1.09
PCM1-213ENST00000519802 VN1R5Q7Z5H4 357 aa8.23□□□□□ -1.09
PCM1-213ENST00000519802 FBXL6Q8N531 539 aa8.23□□□□□ -1.09
PCM1-213ENST00000519802 C12orf50Q8NA57 414 aaPredicted RBP8.23□□□□□ -1.09
PCM1-213ENST00000519802 PMEPA1Q969W9 287 aa8.23□□□□□ -1.09
PCM1-213ENST00000519802 NXPE3Q969Y0 559 aa8.23□□□□□ -1.09
PCM1-213ENST00000519802 GNEQ9Y223 722 aaKnown RBP8.23□□□□□ -1.09
PCM1-213ENST00000519802 A6NHS1 94 aa8.22□□□□□ -1.09
PCM1-213ENST00000519802 PDGFAP04085 211 aa8.22□□□□□ -1.09
PCM1-213ENST00000519802 PCSK2P16519 638 aa8.22□□□□□ -1.09
PCM1-213ENST00000519802 RXRBP28702 533 aa8.22□□□□□ -1.09
PCM1-213ENST00000519802 MTMR3Q13615 1198 aa8.22□□□□□ -1.09
PCM1-213ENST00000519802 IKBKEQ14164 716 aa8.22□□□□□ -1.09
PCM1-213ENST00000519802 CPSF6Q16630 551 aaKnown RBP eCLIP8.22□□□□□ -1.09
PCM1-213ENST00000519802 GTF3C2Q8WUA4 911 aaPredicted RBP8.22□□□□□ -1.09
PCM1-213ENST00000519802 BSNDQ8WZ55 320 aa8.22□□□□□ -1.09
PCM1-213ENST00000519802 OSBPL1AQ9BXW6 950 aa8.22□□□□□ -1.09
PCM1-213ENST00000519802 BIN2Q9UBW5 565 aaPredicted RBP8.22□□□□□ -1.09
PCM1-213ENST00000519802 ANGEL1Q9UNK9 670 aaKnown RBP8.22□□□□□ -1.09
PCM1-213ENST00000519802 LOC100289279A0A1B0GTE1 492 aa8.21□□□□□ -1.1
PCM1-213ENST00000519802 H3BRB1 525 aa8.21□□□□□ -1.1
PCM1-213ENST00000519802 FZD5Q13467 585 aa8.21□□□□□ -1.1
PCM1-213ENST00000519802 HELQQ8TDG4 1101 aa8.21□□□□□ -1.1
PCM1-213ENST00000519802 OSMRQ99650 979 aa8.21□□□□□ -1.1
PCM1-213ENST00000519802 ZKSCAN3Q9BRR0 538 aa8.21□□□□□ -1.1
PCM1-213ENST00000519802 USP26Q9BXU7 913 aa8.21□□□□□ -1.1
PCM1-213ENST00000519802 TUT1Q9H6E5 874 aaKnown RBP8.21□□□□□ -1.1
PCM1-213ENST00000519802 CYP4F12Q9HCS2 524 aa8.21□□□□□ -1.1
PCM1-213ENST00000519802 CCDC39Q9UFE4 941 aa8.21□□□□□ -1.1
PCM1-213ENST00000519802 FAM95CA0A1B0GW59 222 aa8.2□□□□□ -1.1
PCM1-213ENST00000519802 DLGAP3O95886 979 aa8.2□□□□□ -1.1
PCM1-213ENST00000519802 PRNPP04156 253 aa8.2□□□□□ -1.1
PCM1-213ENST00000519802 C8orf34Q49A92 452 aa8.2□□□□□ -1.1
PCM1-213ENST00000519802 NOM1Q5C9Z4 860 aaKnown RBP8.2□□□□□ -1.1
PCM1-213ENST00000519802 NFXL1Q6ZNB6 911 aa8.2□□□□□ -1.1
PCM1-213ENST00000519802 GLYCTKQ8IVS8 523 aa8.2□□□□□ -1.1
PCM1-213ENST00000519802 SHISA5Q8N114 240 aa8.2□□□□□ -1.1
PCM1-213ENST00000519802 SOX17Q9H6I2 414 aaPredicted RBP8.2□□□□□ -1.1
PCM1-213ENST00000519802 CCDC9Q9Y3X0 531 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms