RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 SCHIP1Q9P0W5 487 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-218ENST00000519768 WDR90Q96KV7 1748 aa7.15□□□□□ -1.27
CTNNA1-218ENST00000519768 FIGNL2A6NMB9 653 aa7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 EXOC5O00471 708 aa7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 BTAF1O14981 1849 aa7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 TOMM70O94826 608 aa7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 GTF2E1P29083 439 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 FOXK2Q01167 660 aa7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 AKAP12Q02952 1782 aa7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 SWI5Q1ZZU3 235 aa7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 CDK19Q9BWU1 502 aa7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 TULP4Q9NRJ4 1543 aa7.14□□□□□ -1.27
CTNNA1-218ENST00000519768 WNK3Q9BYP7 1800 aa7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 TOPAZ1Q8N9V7 1692 aa7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 HSPA1AP0DMV8 641 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 HSPA1BP0DMV9 641 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 KCNMA1Q12791 1236 aa7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 TMEM214Q6NUQ4 689 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 PRICKLE2Q7Z3G6 844 aa7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 NBPF15Q8N660 670 aa7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 TSEN2Q8NCE0 465 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 RHBDD1Q8TEB9 315 aa7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 IQSEC3Q9UPP2 1182 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-218ENST00000519768 USP6P35125 1406 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 ANKRD30BQ9BXX2 1392 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 WDR17Q8IZU2 1322 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 CSB-PGBD3P0DP91 1061 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 GSK3AP49840 483 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 GNASQ5JWF2 1037 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 TMEM164Q5U3C3 297 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 NBPF10Q6P3W6 841 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 TAS1R3Q7RTX0 852 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 GAS2L2Q8NHY3 880 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 STK32AQ8WU08 396 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 HINFPQ9BQA5 517 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 TFCP2L1Q9NZI6 479 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 ADGRB1O14514 1584 aa7.12□□□□□ -1.27
CTNNA1-218ENST00000519768 POLR3AO14802 1390 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-218ENST00000519768 POU4F2Q12837 409 aa7.11□□□□□ -1.27
CTNNA1-218ENST00000519768 ZNF295-AS1Q8N0V1 137 aa7.11□□□□□ -1.27
CTNNA1-218ENST00000519768 NIFKQ9BYG3 293 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-218ENST00000519768 NHSQ6T4R5 1651 aa7.11□□□□□ -1.27
CTNNA1-218ENST00000519768 TNS2Q63HR2 1409 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 ARHGEF28Q8N1W1 1705 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 IGSF1Q8N6C5 1336 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 TNRC18O15417 2968 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 SOBPA7XYQ1 873 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 PDE4CQ08493 712 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 NLRP13Q86W25 1043 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 SLC9A9Q8IVB4 645 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 STAG2Q8N3U4 1231 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 CARD10Q9BWT7 1032 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 USTQ9Y2C2 406 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 QSER1Q2KHR3 1735 aa7.1□□□□□ -1.27
CTNNA1-218ENST00000519768 TMEM88BA6NKF7 163 aa7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 WEE1P30291 646 aa7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 PTSQ03393 145 aa7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 TEAD4Q15561 434 aa7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 C4orf17Q53FE4 359 aa7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 ARHGEF25Q86VW2 580 aa7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 CLP1Q92989 425 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 TSPAN10Q9H1Z9 355 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 CD2APQ9Y5K6 639 aa7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 USP3Q9Y6I4 520 aa7.09□□□□□ -1.27
CTNNA1-218ENST00000519768 SLC35F4A4IF30 521 aa7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 C21orf2O43822 256 aa7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 IGFBP4P22692 258 aa7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 PSMA6P60900 246 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 IRF7Q92985 503 aa7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 RRAGCQ9HB90 399 aa7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 TIMMDC1Q9NPL8 285 aa7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 CABP1Q9NZU7 370 aa7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 NXF1Q9UBU9 619 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 DYRK1BQ9Y463 629 aa7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 BRD4O60885 1362 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 NSD2O96028 1365 aa7.08□□□□□ -1.28
CTNNA1-218ENST00000519768 RHOQP17081 205 aa7.07□□□□□ -1.28
CTNNA1-218ENST00000519768 HIRAP54198 1017 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-218ENST00000519768 SCG3Q8WXD2 468 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-218ENST00000519768 PODXL2Q9NZ53 605 aa7.07□□□□□ -1.28
CTNNA1-218ENST00000519768 CHMP3Q9Y3E7 222 aa7.07□□□□□ -1.28
CTNNA1-218ENST00000519768 SLIT3O75094 1523 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 A0A1B0GTH6 734 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 SERTM1A2A2V5 107 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 FOXN1O15353 648 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 PPP1R12BO60237 982 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 NOS2P35228 1153 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 PHKA2P46019 1235 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 OCLNQ16625 522 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 TBCELQ5QJ74 424 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 NPAS3Q8IXF0 933 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 RETREG2Q8NC44 543 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 C1orf216Q8TAB5 229 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 DDX54Q8TDD1 881 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 ZDHHC1Q8WTX9 485 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 L3MBTL2Q969R5 705 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 MPHOSPH9Q99550 1183 aa7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 C2orf49Q9BVC5 232 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-218ENST00000519768 KRTAP9-2Q9BYQ4 174 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms