RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PAPPA2Q9BXP8 1791 aa15.72■□□□□ 0.11
CSMD1-205ENST00000519623 FKBP1AP62942 108 aaKnown RBP15.71■□□□□ 0.11
CSMD1-205ENST00000519623 UBE4AQ14139 1066 aa15.71■□□□□ 0.11
CSMD1-205ENST00000519623 RABL6Q3YEC7 729 aaPredicted RBP15.71■□□□□ 0.11
CSMD1-205ENST00000519623 SAGE1Q9NXZ1 904 aa15.71■□□□□ 0.11
CSMD1-205ENST00000519623 PTPRCP08575 1304 aa15.7■□□□□ 0.1
CSMD1-205ENST00000519623 AKAP11Q9UKA4 1901 aa15.7■□□□□ 0.1
CSMD1-205ENST00000519623 TRPA1O75762 1119 aa15.7■□□□□ 0.1
CSMD1-205ENST00000519623 DLGAP5Q15398 846 aa15.7■□□□□ 0.1
CSMD1-205ENST00000519623 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
CSMD1-205ENST00000519623 TRMT2AQ8IZ69 625 aaKnown RBP15.7■□□□□ 0.1
CSMD1-205ENST00000519623 ANKRD44Q8N8A2 993 aa15.7■□□□□ 0.1
CSMD1-205ENST00000519623 TDRD7Q8NHU6 1098 aaKnown RBP15.7■□□□□ 0.1
CSMD1-205ENST00000519623 CDCA7LQ96GN5 454 aa15.7■□□□□ 0.1
CSMD1-205ENST00000519623 FAM84BQ96KN1 310 aaPredicted RBP15.7■□□□□ 0.1
CSMD1-205ENST00000519623 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
CSMD1-205ENST00000519623 PCDHAC2Q9Y5I4 1007 aa15.7■□□□□ 0.1
CSMD1-205ENST00000519623 APOBEC3FQ8IUX4 373 aaKnown RBP15.69■□□□□ 0.1
CSMD1-205ENST00000519623 PRMT6Q96LA8 375 aaPredicted RBP15.69■□□□□ 0.1
CSMD1-205ENST00000519623 MCOLN1Q9GZU1 580 aa15.69■□□□□ 0.1
CSMD1-205ENST00000519623 USP44Q9H0E7 712 aa15.69■□□□□ 0.1
CSMD1-205ENST00000519623 JAG2Q9Y219 1238 aa15.69■□□□□ 0.1
CSMD1-205ENST00000519623 FAM205AQ6ZU69 1335 aa15.68■□□□□ 0.1
CSMD1-205ENST00000519623 F8W031 263 aaPredicted RBP15.68■□□□□ 0.1
CSMD1-205ENST00000519623 NF2P35240 595 aa15.68■□□□□ 0.1
CSMD1-205ENST00000519623 GYG1P46976 350 aa15.68■□□□□ 0.1
CSMD1-205ENST00000519623 PTPN12Q05209 780 aaKnown RBP15.68■□□□□ 0.1
CSMD1-205ENST00000519623 TTLL12Q14166 644 aaPredicted RBP15.68■□□□□ 0.1
CSMD1-205ENST00000519623 CFAP100Q494V2 611 aa15.68■□□□□ 0.1
CSMD1-205ENST00000519623 DEFB129Q9H1M3 183 aa15.68■□□□□ 0.1
CSMD1-205ENST00000519623 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
CSMD1-205ENST00000519623 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
CSMD1-205ENST00000519623 HIBADHP31937 336 aaKnown RBP15.67■□□□□ 0.1
CSMD1-205ENST00000519623 ALDH1L2Q3SY69 923 aa15.67■□□□□ 0.1
CSMD1-205ENST00000519623 LRRC24Q50LG9 513 aa15.67■□□□□ 0.1
CSMD1-205ENST00000519623 LDLRAD1Q5T700 205 aa15.67■□□□□ 0.1
CSMD1-205ENST00000519623 AOX1Q06278 1338 aa15.67■□□□□ 0.1
CSMD1-205ENST00000519623 MROH5Q6ZUA9 1318 aa15.67■□□□□ 0.1
CSMD1-205ENST00000519623 CCDC85CA6NKD9 419 aa15.66■□□□□ 0.1
CSMD1-205ENST00000519623 DGKZQ13574 1117 aa15.66■□□□□ 0.1
CSMD1-205ENST00000519623 PRKG1Q13976 671 aa15.66■□□□□ 0.1
CSMD1-205ENST00000519623 FBXO33Q7Z6M2 555 aa15.66■□□□□ 0.1
CSMD1-205ENST00000519623 TM4SF4P48230 202 aa15.65■□□□□ 0.1
CSMD1-205ENST00000519623 MFSD14BQ5SR56 506 aa15.65■□□□□ 0.1
CSMD1-205ENST00000519623 ARMC9Q7Z3E5 817 aa15.65■□□□□ 0.1
CSMD1-205ENST00000519623 VGLL2Q8N8G2 317 aa15.65■□□□□ 0.1
CSMD1-205ENST00000519623 FZD1Q9UP38 647 aa15.65■□□□□ 0.1
CSMD1-205ENST00000519623 ECM29Q5VYK3 1845 aa15.65■□□□□ 0.1
CSMD1-205ENST00000519623 CLRN2A0PK11 232 aa15.64■□□□□ 0.09
CSMD1-205ENST00000519623 PDE8BO95263 885 aa15.64■□□□□ 0.09
CSMD1-205ENST00000519623 MAP3K11Q16584 847 aa15.64■□□□□ 0.09
CSMD1-205ENST00000519623 KLHDC4Q8TBB5 520 aa15.64■□□□□ 0.09
CSMD1-205ENST00000519623 ANGEL1Q9UNK9 670 aaKnown RBP15.64■□□□□ 0.09
CSMD1-205ENST00000519623 PPP2R3BQ9Y5P8 575 aa15.64■□□□□ 0.09
CSMD1-205ENST00000519623 MYO1BO43795 1136 aa15.63■□□□□ 0.09
CSMD1-205ENST00000519623 RFX5P48382 616 aaPredicted RBP15.63■□□□□ 0.09
CSMD1-205ENST00000519623 RGS19P49795 217 aa15.63■□□□□ 0.09
CSMD1-205ENST00000519623 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.09
CSMD1-205ENST00000519623 METTL24Q5JXM2 366 aa15.63■□□□□ 0.09
CSMD1-205ENST00000519623 SERPINA10Q9UK55 444 aa15.63■□□□□ 0.09
CSMD1-205ENST00000519623 TTF2Q9UNY4 1162 aaKnown RBP15.63■□□□□ 0.09
CSMD1-205ENST00000519623 COL1A1P02452 1464 aaPredicted RBP15.63■□□□□ 0.09
CSMD1-205ENST00000519623 MKRN3Q13064 507 aaKnown RBP15.62■□□□□ 0.09
CSMD1-205ENST00000519623 GRIK5Q16478 980 aa15.62■□□□□ 0.09
CSMD1-205ENST00000519623 SUPT20HL1Q3ZLR7 823 aa15.62■□□□□ 0.09
CSMD1-205ENST00000519623 NBPF12Q5TAG4 269 aaPredicted RBP15.62■□□□□ 0.09
CSMD1-205ENST00000519623 SPRYD7Q5W111 196 aa15.62■□□□□ 0.09
CSMD1-205ENST00000519623 SMC4Q9NTJ3 1288 aa15.62■□□□□ 0.09
CSMD1-205ENST00000519623 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
CSMD1-205ENST00000519623 CCER2I3L3R5 266 aa15.61■□□□□ 0.09
CSMD1-205ENST00000519623 TBC1D8O95759 1140 aa15.61■□□□□ 0.09
CSMD1-205ENST00000519623 CT47B1P0C2W7 299 aaPredicted RBP15.61■□□□□ 0.09
CSMD1-205ENST00000519623 FGFR2P21802 821 aa15.61■□□□□ 0.09
CSMD1-205ENST00000519623 RASA3Q14644 834 aa15.61■□□□□ 0.09
CSMD1-205ENST00000519623 SPDYE2Q495Y8 402 aa15.61■□□□□ 0.09
CSMD1-205ENST00000519623 VPS37DQ86XT2 251 aa15.61■□□□□ 0.09
CSMD1-205ENST00000519623 DZIP1LQ8IYY4 767 aaKnown RBP15.61■□□□□ 0.09
CSMD1-205ENST00000519623 SLC10A4Q96EP9 437 aa15.61■□□□□ 0.09
CSMD1-205ENST00000519623 VEZTQ9HBM0 779 aa15.61■□□□□ 0.09
CSMD1-205ENST00000519623 ZNF70Q9UC06 446 aaPredicted RBP15.61■□□□□ 0.09
CSMD1-205ENST00000519623 NOB1Q9ULX3 412 aaKnown RBP15.61■□□□□ 0.09
CSMD1-205ENST00000519623 IQSEC3Q9UPP2 1182 aaPredicted RBP15.61■□□□□ 0.09
CSMD1-205ENST00000519623 UNCXA6NJT0 531 aa15.6■□□□□ 0.09
CSMD1-205ENST00000519623 PPP1R12BO60237 982 aaPredicted RBP15.6■□□□□ 0.09
CSMD1-205ENST00000519623 USP2O75604 605 aaPredicted RBP15.6■□□□□ 0.09
CSMD1-205ENST00000519623 BCAMP50895 628 aa15.6■□□□□ 0.09
CSMD1-205ENST00000519623 CAVIN4Q5BKX8 364 aa15.6■□□□□ 0.09
CSMD1-205ENST00000519623 CLMNQ96JQ2 1002 aa15.6■□□□□ 0.09
CSMD1-205ENST00000519623 TDRD3Q9H7E2 651 aaKnown RBP15.6■□□□□ 0.09
CSMD1-205ENST00000519623 EYA2O00167 538 aa15.59■□□□□ 0.09
CSMD1-205ENST00000519623 CRKP46108 304 aa15.59■□□□□ 0.09
CSMD1-205ENST00000519623 ATG9AQ7Z3C6 839 aa15.59■□□□□ 0.09
CSMD1-205ENST00000519623 HDLBPQ00341 1268 aaKnown RBP15.58■□□□□ 0.08
CSMD1-205ENST00000519623 SREBF2Q12772 1141 aa15.58■□□□□ 0.08
CSMD1-205ENST00000519623 CHAF1AQ13111 956 aaPredicted RBP15.58■□□□□ 0.08
CSMD1-205ENST00000519623 PUM3Q15397 648 aaKnown RBP15.58■□□□□ 0.08
CSMD1-205ENST00000519623 NOM1Q5C9Z4 860 aaKnown RBP15.58■□□□□ 0.08
CSMD1-205ENST00000519623 CTU1Q7Z7A3 348 aaKnown RBP15.58■□□□□ 0.08
CSMD1-205ENST00000519623 TBC1D22AQ8WUA7 517 aa15.58■□□□□ 0.08
CSMD1-205ENST00000519623 ZNF296Q8WUU4 475 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms