RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 AOX1Q06278 1338 aa16.6■□□□□ 0.25
VEGFA-219ENST00000518824 CIAO1O76071 339 aa16.59■□□□□ 0.25
VEGFA-219ENST00000518824 SASH1O94885 1247 aa16.59■□□□□ 0.25
VEGFA-219ENST00000518824 ANGEL2Q5VTE6 544 aaKnown RBP16.59■□□□□ 0.25
VEGFA-219ENST00000518824 WNT10BO00744 389 aa16.58■□□□□ 0.24
VEGFA-219ENST00000518824 CELF2O95319 508 aaKnown RBP16.58■□□□□ 0.24
VEGFA-219ENST00000518824 ADORA1P30542 326 aa16.58■□□□□ 0.24
VEGFA-219ENST00000518824 PUM3Q15397 648 aaKnown RBP16.58■□□□□ 0.24
VEGFA-219ENST00000518824 CDC37L1Q7L3B6 337 aa16.58■□□□□ 0.24
VEGFA-219ENST00000518824 KRT26Q7Z3Y9 468 aa16.58■□□□□ 0.24
VEGFA-219ENST00000518824 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.24
VEGFA-219ENST00000518824 ZNF408Q9H9D4 720 aa16.58■□□□□ 0.24
VEGFA-219ENST00000518824 FAM205AQ6ZU69 1335 aa16.58■□□□□ 0.24
VEGFA-219ENST00000518824 MYO3BQ8WXR4 1341 aa16.58■□□□□ 0.24
VEGFA-219ENST00000518824 COL1A1P02452 1464 aaPredicted RBP16.57■□□□□ 0.24
VEGFA-219ENST00000518824 CNTNAP1P78357 1384 aa16.57■□□□□ 0.24
VEGFA-219ENST00000518824 CHAF1AQ13111 956 aaPredicted RBP16.57■□□□□ 0.24
VEGFA-219ENST00000518824 C20orf194Q5TEA3 1177 aa16.57■□□□□ 0.24
VEGFA-219ENST00000518824 ZBED3Q96IU2 234 aaPredicted RBP16.57■□□□□ 0.24
VEGFA-219ENST00000518824 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
VEGFA-219ENST00000518824 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
VEGFA-219ENST00000518824 IFIT1P09914 478 aaKnown RBP16.56■□□□□ 0.24
VEGFA-219ENST00000518824 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-219ENST00000518824 TFCP2Q12800 502 aa16.56■□□□□ 0.24
VEGFA-219ENST00000518824 ATP2B3Q16720 1220 aa16.56■□□□□ 0.24
VEGFA-219ENST00000518824 MFSD14BQ5SR56 506 aa16.56■□□□□ 0.24
VEGFA-219ENST00000518824 PRAMEF18Q5VWM3 479 aa16.56■□□□□ 0.24
VEGFA-219ENST00000518824 JMYQ8N9B5 988 aa16.56■□□□□ 0.24
VEGFA-219ENST00000518824 LPIN2Q92539 896 aa16.56■□□□□ 0.24
VEGFA-219ENST00000518824 DCPSQ96C86 337 aaKnown RBP16.56■□□□□ 0.24
VEGFA-219ENST00000518824 CEP126Q9P2H0 1117 aa16.56■□□□□ 0.24
VEGFA-219ENST00000518824 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
VEGFA-219ENST00000518824 ABT1Q9ULW3 272 aaKnown RBP16.56■□□□□ 0.24
VEGFA-219ENST00000518824 SLC5A1P13866 664 aa16.55■□□□□ 0.24
VEGFA-219ENST00000518824 VEGFBP49765 207 aa16.55■□□□□ 0.24
VEGFA-219ENST00000518824 TIMM10P62072 90 aa16.55■□□□□ 0.24
VEGFA-219ENST00000518824 FKBP1AP62942 108 aaKnown RBP16.55■□□□□ 0.24
VEGFA-219ENST00000518824 POLA2Q14181 598 aa16.55■□□□□ 0.24
VEGFA-219ENST00000518824 VPS37DQ86XT2 251 aa16.55■□□□□ 0.24
VEGFA-219ENST00000518824 OGFOD1Q8N543 542 aa16.55■□□□□ 0.24
VEGFA-219ENST00000518824 COG6Q9Y2V7 657 aa16.55■□□□□ 0.24
VEGFA-219ENST00000518824 MYH13Q9UKX3 1938 aa16.55■□□□□ 0.24
VEGFA-219ENST00000518824 RASSF10A6NK89 507 aa16.54■□□□□ 0.24
VEGFA-219ENST00000518824 PHKA1P46020 1223 aa16.54■□□□□ 0.24
VEGFA-219ENST00000518824 ATP8B2P98198 1209 aa16.54■□□□□ 0.24
VEGFA-219ENST00000518824 CFAP100Q494V2 611 aa16.54■□□□□ 0.24
VEGFA-219ENST00000518824 CAVIN4Q5BKX8 364 aa16.54■□□□□ 0.24
VEGFA-219ENST00000518824 TLL2Q9Y6L7 1015 aa16.54■□□□□ 0.24
VEGFA-219ENST00000518824 DEFB115Q30KQ5 88 aa16.53■□□□□ 0.24
VEGFA-219ENST00000518824 SULF1Q8IWU6 871 aa16.53■□□□□ 0.24
VEGFA-219ENST00000518824 SSH3Q8TE77 659 aa16.53■□□□□ 0.24
VEGFA-219ENST00000518824 CDCA5Q96FF9 252 aa16.53■□□□□ 0.24
VEGFA-219ENST00000518824 PRMT6Q96LA8 375 aaPredicted RBP16.53■□□□□ 0.24
VEGFA-219ENST00000518824 HDAC9Q9UKV0 1011 aa16.53■□□□□ 0.24
VEGFA-219ENST00000518824 MVPQ14764 893 aaKnown RBP16.52■□□□□ 0.24
VEGFA-219ENST00000518824 CYP4F22Q6NT55 531 aa16.52■□□□□ 0.24
VEGFA-219ENST00000518824 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
VEGFA-219ENST00000518824 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
VEGFA-219ENST00000518824 TTF2Q9UNY4 1162 aaKnown RBP16.52■□□□□ 0.24
VEGFA-219ENST00000518824 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.23
VEGFA-219ENST00000518824 PITPNM2Q9BZ72 1349 aa16.51■□□□□ 0.23
VEGFA-219ENST00000518824 A0A1B0GUL7 405 aa16.51■□□□□ 0.23
VEGFA-219ENST00000518824 CLRN2A0PK11 232 aa16.51■□□□□ 0.23
VEGFA-219ENST00000518824 FRAT2O75474 233 aaPredicted RBP16.51■□□□□ 0.23
VEGFA-219ENST00000518824 DLGAP5Q15398 846 aa16.51■□□□□ 0.23
VEGFA-219ENST00000518824 MTMR14Q8NCE2 650 aa16.51■□□□□ 0.23
VEGFA-219ENST00000518824 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
VEGFA-219ENST00000518824 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
VEGFA-219ENST00000518824 GRM1Q13255 1194 aa16.5■□□□□ 0.23
VEGFA-219ENST00000518824 CCDC102BQ68D86 513 aa16.5■□□□□ 0.23
VEGFA-219ENST00000518824 MOB2Q70IA6 237 aa16.5■□□□□ 0.23
VEGFA-219ENST00000518824 XAGE2Q96GT9 111 aa16.5■□□□□ 0.23
VEGFA-219ENST00000518824 RBM5P52756 815 aaKnown RBP eCLIP16.49■□□□□ 0.231e-9■□□□□ 9.1
VEGFA-219ENST00000518824 G3BP1Q13283 466 aaKnown RBP eCLIP16.49■□□□□ 0.23
VEGFA-219ENST00000518824 PAXIP1Q6ZW49 1069 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-219ENST00000518824 CAPNS2Q96L46 248 aa16.49■□□□□ 0.23
VEGFA-219ENST00000518824 GBA2Q9HCG7 927 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-219ENST00000518824 FZD1Q9UP38 647 aa16.49■□□□□ 0.23
VEGFA-219ENST00000518824 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
VEGFA-219ENST00000518824 AOC2O75106 756 aa16.48■□□□□ 0.23
VEGFA-219ENST00000518824 SURF6O75683 361 aaKnown RBP16.48■□□□□ 0.23
VEGFA-219ENST00000518824 CRKP46108 304 aa16.48■□□□□ 0.23
VEGFA-219ENST00000518824 SIRT2Q8IXJ6 389 aa16.48■□□□□ 0.23
VEGFA-219ENST00000518824 NEUROD6Q96NK8 337 aa16.48■□□□□ 0.23
VEGFA-219ENST00000518824 ZIC5Q96T25 663 aa16.48■□□□□ 0.23
VEGFA-219ENST00000518824 ZBTB40Q9NUA8 1239 aa16.48■□□□□ 0.23
VEGFA-219ENST00000518824 HSPA1AP0DMV8 641 aaKnown RBP16.47■□□□□ 0.23
VEGFA-219ENST00000518824 HSPA1BP0DMV9 641 aaKnown RBP16.47■□□□□ 0.23
VEGFA-219ENST00000518824 PRDX5P30044 214 aa16.47■□□□□ 0.23
VEGFA-219ENST00000518824 MMP14P50281 582 aa16.47■□□□□ 0.23
VEGFA-219ENST00000518824 HUNKP57058 714 aa16.47■□□□□ 0.23
VEGFA-219ENST00000518824 RASGRF1Q13972 1273 aa16.47■□□□□ 0.23
VEGFA-219ENST00000518824 PI16Q6UXB8 463 aa16.47■□□□□ 0.23
VEGFA-219ENST00000518824 TDRD3Q9H7E2 651 aaKnown RBP16.47■□□□□ 0.23
VEGFA-219ENST00000518824 NOP58Q9Y2X3 529 aaKnown RBP16.47■□□□□ 0.23
VEGFA-219ENST00000518824 PCNTO95613 3336 aa16.47■□□□□ 0.23
VEGFA-219ENST00000518824 THSD7BQ9C0I4 1608 aa16.46■□□□□ 0.23
VEGFA-219ENST00000518824 MS4A1P11836 297 aa16.46■□□□□ 0.23
VEGFA-219ENST00000518824 CDAN1Q8IWY9 1227 aa16.46■□□□□ 0.23
VEGFA-219ENST00000518824 TBC1D22AQ8WUA7 517 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms