RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 USP2O75604 605 aaPredicted RBP11.45□□□□□ -0.58
PVT1-207ENST00000518528 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
PVT1-207ENST00000518528 RBM5P52756 815 aaKnown RBP eCLIP11.45□□□□□ -0.58
PVT1-207ENST00000518528 CFAP100Q494V2 611 aa11.45□□□□□ -0.58
PVT1-207ENST00000518528 NBPF12Q5TAG4 269 aaPredicted RBP11.45□□□□□ -0.58
PVT1-207ENST00000518528 PTPN18Q99952 460 aa11.45□□□□□ -0.58
PVT1-207ENST00000518528 GREM2Q9H772 168 aa11.45□□□□□ -0.58
PVT1-207ENST00000518528 PHAXQ9H814 394 aaKnown RBP11.45□□□□□ -0.58
PVT1-207ENST00000518528 ELP3Q9H9T3 547 aa11.45□□□□□ -0.58
PVT1-207ENST00000518528 COL4A1P02462 1669 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 CCL15-CCL14A0A0B4J2E2 113 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 GJA5P36382 358 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 CALD1Q05682 793 aaKnown RBP11.44□□□□□ -0.58
PVT1-207ENST00000518528 RASA3Q14644 834 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 CCL15Q16663 113 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 TXNRD3Q86VQ6 643 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 RUNDC1Q96C34 613 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 CD209Q9NNX6 404 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 RBM27Q9P2N5 1060 aaKnown RBP11.44□□□□□ -0.58
PVT1-207ENST00000518528 CSADQ9Y600 493 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 DLG5Q8TDM6 1919 aa11.44□□□□□ -0.58
PVT1-207ENST00000518528 F8W031 263 aaPredicted RBP11.43□□□□□ -0.58
PVT1-207ENST00000518528 HOXD10P28358 340 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 FKBP1AP62942 108 aaKnown RBP11.43□□□□□ -0.58
PVT1-207ENST00000518528 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.58
PVT1-207ENST00000518528 CCDC30Q5VVM6 783 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 ZNF804AQ7Z570 1209 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 CCDC146Q8IYE0 955 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 SH3TC2Q8TF17 1288 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 BRI3BPQ8WY22 251 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 MS4A4AQ96JQ5 239 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 MBIPQ9NS73 344 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 TRIM35Q9UPQ4 493 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 MAP3K2Q9Y2U5 619 aa11.43□□□□□ -0.58
PVT1-207ENST00000518528 CUL9Q8IWT3 2517 aa11.42□□□□□ -0.58
PVT1-207ENST00000518528 CETPP11597 493 aa11.42□□□□□ -0.58
PVT1-207ENST00000518528 MAP3K9P80192 1104 aa11.42□□□□□ -0.58
PVT1-207ENST00000518528 RALBP1Q15311 655 aa11.42□□□□□ -0.58
PVT1-207ENST00000518528 HELBQ8NG08 1087 aaPredicted RBP11.42□□□□□ -0.58
PVT1-207ENST00000518528 ZCCHC17Q9NP64 241 aaKnown RBP11.42□□□□□ -0.58
PVT1-207ENST00000518528 A0A1W2PPC1 479 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 ELL2O00472 640 aaPredicted RBP11.41□□□□□ -0.58
PVT1-207ENST00000518528 TLR2O60603 784 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 ITGA6P23229 1130 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 KLRK1P26718 216 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 TNNI2P48788 182 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 GNAI1P63096 354 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 LACTBP83111 547 aaPredicted RBP11.41□□□□□ -0.58
PVT1-207ENST00000518528 KSR2Q6VAB6 950 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 CERS5Q8N5B7 392 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 PRMT6Q96LA8 375 aaPredicted RBP11.41□□□□□ -0.58
PVT1-207ENST00000518528 IFT57Q9NWB7 429 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 SSC5DA1L4H1 1573 aa11.41□□□□□ -0.58
PVT1-207ENST00000518528 MKI67P46013 3256 aaKnown RBP11.4□□□□□ -0.58
PVT1-207ENST00000518528 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
PVT1-207ENST00000518528 CAP1Q01518 475 aa11.4□□□□□ -0.58
PVT1-207ENST00000518528 CHRNDQ07001 517 aa11.4□□□□□ -0.58
PVT1-207ENST00000518528 SNAPC2Q13487 334 aa11.4□□□□□ -0.58
PVT1-207ENST00000518528 C15orf52Q6ZUT6 534 aaKnown RBP11.4□□□□□ -0.58
PVT1-207ENST00000518528 UBE3BQ7Z3V4 1068 aa11.4□□□□□ -0.58
PVT1-207ENST00000518528 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
PVT1-207ENST00000518528 RAET1EQ8TD07 263 aa11.4□□□□□ -0.58
PVT1-207ENST00000518528 HOOK2Q96ED9 719 aa11.4□□□□□ -0.58
PVT1-207ENST00000518528 STK31Q9BXU1 1019 aa11.4□□□□□ -0.58
PVT1-207ENST00000518528 BIN2Q9UBW5 565 aaPredicted RBP11.4□□□□□ -0.58
PVT1-207ENST00000518528 HTTP42858 3142 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 ANKRD18BA2A2Z9 1011 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 IGKV5-2P06315 115 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 IL1R1P14778 569 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
PVT1-207ENST00000518528 UBXN2AP68543 259 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 VGLL4Q14135 290 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 SPDYE2Q495Y8 402 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.39□□□□□ -0.59
PVT1-207ENST00000518528 FAM43AQ8N2R8 423 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 TRIM47Q96LD4 638 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 PLA2G12BQ9BX93 195 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 ZNF70Q9UC06 446 aaPredicted RBP11.39□□□□□ -0.59
PVT1-207ENST00000518528 SERPINA10Q9UK55 444 aa11.39□□□□□ -0.59
PVT1-207ENST00000518528 RBBP6Q7Z6E9 1792 aaKnown RBP11.39□□□□□ -0.59
PVT1-207ENST00000518528 PSME4Q14997 1843 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 NEURL1BA8MQ27 555 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 H7C1W4 665 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 FMNL1O95466 1100 aaPredicted RBP11.38□□□□□ -0.59
PVT1-207ENST00000518528 GJB1P08034 283 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 CAPN2P17655 700 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 GRK4P32298 578 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 GJA8P48165 433 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 ERO1BQ86YB8 467 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 MYH16Q9H6N6 1097 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 SRRDQ9UH36 339 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
PVT1-207ENST00000518528 SPDYE5A6NIY4 337 aa11.37□□□□□ -0.59
PVT1-207ENST00000518528 ZBTB7BO15156 539 aaPredicted RBP11.37□□□□□ -0.59
PVT1-207ENST00000518528 ZNF853P0CG23 659 aa11.37□□□□□ -0.59
PVT1-207ENST00000518528 PSMC4P43686 418 aa11.37□□□□□ -0.59
PVT1-207ENST00000518528 IFIT5Q13325 482 aaKnown RBP11.37□□□□□ -0.59
PVT1-207ENST00000518528 MTFR1Q15390 333 aa11.37□□□□□ -0.59
PVT1-207ENST00000518528 CWF19L2Q2TBE0 894 aaKnown RBP11.37□□□□□ -0.59
PVT1-207ENST00000518528 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms