RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 FGRP09769 529 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 ATP2B1P20020 1258 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 EIF4A3P38919 411 aaKnown RBP5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 ADH7P40394 386 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 LIG3P49916 1009 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 SRSF11Q05519 484 aaKnown RBP5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 RAB44Q7Z6P3 723 aaPredicted RBP5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 FAM35AQ86V20 835 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 KIAA0825Q8IV33 1275 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 DDX54Q8TDD1 881 aaKnown RBP5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 SPON2Q9BUD6 331 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 LRRC3Q9BY71 257 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 PRDM6Q9NQX0 595 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 PCDHGB7Q9Y5F8 929 aa5.15□□□□□ -1.59
RNU6-390P-201ENST00000516259 J3QW42 95 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 GPR25O00155 361 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 LCE2BO14633 110 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 ACPPP15309 386 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 EIF2AK2P19525 551 aaKnown RBP5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 GARTP22102 1010 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 ALAS2P22557 587 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 CANXP27824 592 aaKnown RBP5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 PAK2Q13177 524 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 LRRC14Q15048 493 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 SPRED3Q2MJR0 410 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 PERM1Q5SV97 790 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 NBPF6Q5VWK0 638 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 DIEXFQ68CQ4 756 aaKnown RBP5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 ELMSAN1Q6PJG2 1045 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 Q6ZNB5 142 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 VN1R5Q7Z5H4 357 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 TRIM42Q8IWZ5 723 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 NBPF4Q96M43 638 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 LPIN3Q9BQK8 851 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 HIRIP3Q9BW71 556 aaPredicted RBP5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 EMILIN2Q9BXX0 1053 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 COPRSQ9NQ92 184 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 ADAMTS1Q9UHI8 967 aa5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 SUPT16HQ9Y5B9 1047 aaKnown RBP5.14□□□□□ -1.59
RNU6-390P-201ENST00000516259 NME2P22392 152 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 GBP2P32456 591 aaPredicted RBP5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 SOX9P48436 509 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 TNNI2P48788 182 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 PCBP4P57723 403 aaKnown RBP5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 ATP11AP98196 1134 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 PCDH1Q08174 1060 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 FAAP100Q0VG06 881 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 CEP135Q66GS9 1140 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 TTBK2Q6IQ55 1244 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 C20orf204Q6ZNR8 217 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 ILDR2Q71H61 639 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 FCHSD1Q86WN1 690 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 SLITRK4Q8IW52 837 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 MICALL1Q8N3F8 863 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 ZNF296Q8WUU4 475 aaPredicted RBP5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 HHIPQ96QV1 700 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 CACNA2D2Q9NY47 1150 aa5.13□□□□□ -1.59
RNU6-390P-201ENST00000516259 LOC105371045A0A1W2PR82 267 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 FAM177BA6PVY3 158 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 ESRRAP11474 423 aaPredicted RBP5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 BMP6P22004 513 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 CDC27P30260 824 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 CABP4P57796 275 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 AP3B2Q13367 1082 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 CAMK2GQ13555 558 aaPredicted RBP5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 TPTE2Q6XPS3 522 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 FAM196AQ6ZSG2 479 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 MCF2L2Q86YR7 1114 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 MAP4K3Q8IVH8 894 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 SMG9Q9H0W8 520 aaKnown RBP5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 OSGEPQ9NPF4 335 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 NAGPAQ9UK23 515 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 IGF1RP08069 1367 aa5.12□□□□□ -1.59
RNU6-390P-201ENST00000516259 METTL12A8MUP2 240 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 H3BRJ5 948 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 TRPA1O75762 1119 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 RGS9O75916 674 aaPredicted RBP5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 CELA3AP09093 270 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 EPXP11678 715 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 CPB1P15086 417 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 ARNTP27540 789 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 PIP4K2BP78356 416 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 HNRNPUQ00839 825 aaKnown RBP eCLIP5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 MLLT1Q03111 559 aaPredicted RBP5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 ZNF252P-AS1Q0IIN9 211 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 NFX1Q12986 1120 aaKnown RBP5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 GRIK5Q16478 980 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 ZNF423Q2M1K9 1284 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 PCNX4Q63HM2 1172 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 FBXL19Q6PCT2 694 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 HFE2Q6ZVN8 426 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 NOP9Q86U38 636 aaKnown RBP5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 REXO1Q8N1G1 1221 aaKnown RBP5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 GPR161Q8N6U8 529 aaKnown RBP5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 ASAP3Q8TDY4 903 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 DCAF11Q8TEB1 546 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 SLC16A10Q8TF71 515 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 GATAD2BQ8WXI9 593 aa5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 EAF1Q96JC9 268 aaPredicted RBP5.11□□□□□ -1.59
RNU6-390P-201ENST00000516259 GGA1Q9UJY5 639 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms