RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 TRAF5O00463 557 aa24.05■■□□□ 1.44
LMNA-225ENST00000515824 BCAMP50895 628 aa24.05■■□□□ 1.44
LMNA-225ENST00000515824 ATP8B2P98198 1209 aa24.05■■□□□ 1.44
LMNA-225ENST00000515824 ATP2B3Q16720 1220 aa24.05■■□□□ 1.44
LMNA-225ENST00000515824 CERS5Q8N5B7 392 aa24.05■■□□□ 1.44
LMNA-225ENST00000515824 C1orf115Q9H7X2 142 aa24.05■■□□□ 1.44
LMNA-225ENST00000515824 JAG2Q9Y219 1238 aa24.05■■□□□ 1.44
LMNA-225ENST00000515824 G3BP1Q13283 466 aaKnown RBP eCLIP24.04■■□□□ 1.442e-8■■■■□ 22.3
LMNA-225ENST00000515824 USP48Q86UV5 1035 aa24.04■■□□□ 1.44
LMNA-225ENST00000515824 KLRG1Q96E93 195 aa24.04■■□□□ 1.44
LMNA-225ENST00000515824 MVPQ14764 893 aaKnown RBP24.03■■□□□ 1.44
LMNA-225ENST00000515824 KRT26Q7Z3Y9 468 aa24.03■■□□□ 1.44
LMNA-225ENST00000515824 GGA3Q9NZ52 723 aa24.03■■□□□ 1.44
LMNA-225ENST00000515824 DDX19BQ9UMR2 479 aa24.03■■□□□ 1.44
LMNA-225ENST00000515824 AKAP2Q9Y2D5 859 aa24.03■■□□□ 1.44
LMNA-225ENST00000515824 FMR1Q06787 632 aaKnown RBP eCLIP24.02■■□□□ 1.441e-9■■■■□ 24.5
LMNA-225ENST00000515824 MFSD14BQ5SR56 506 aa24.02■■□□□ 1.44
LMNA-225ENST00000515824 SULF1Q8IWU6 871 aa24.02■■□□□ 1.44
LMNA-225ENST00000515824 CHMP4BQ9H444 224 aaKnown RBP24.02■■□□□ 1.44
LMNA-225ENST00000515824 IQSEC3Q9UPP2 1182 aaPredicted RBP24.02■■□□□ 1.44
LMNA-225ENST00000515824 F8W031 263 aaPredicted RBP24.01■■□□□ 1.43
LMNA-225ENST00000515824 POLA2Q14181 598 aa24.01■■□□□ 1.43
LMNA-225ENST00000515824 ANGEL2Q5VTE6 544 aaKnown RBP24.01■■□□□ 1.43
LMNA-225ENST00000515824 SSH3Q8TE77 659 aa24.01■■□□□ 1.43
LMNA-225ENST00000515824 COG6Q9Y2V7 657 aa24.01■■□□□ 1.43
LMNA-225ENST00000515824 WNT10BO00744 389 aa24■■□□□ 1.43
LMNA-225ENST00000515824 TFCP2Q12800 502 aa24■■□□□ 1.43
LMNA-225ENST00000515824 CHAF1AQ13111 956 aaPredicted RBP24■■□□□ 1.43
LMNA-225ENST00000515824 PDE3AQ14432 1141 aa24■■□□□ 1.43
LMNA-225ENST00000515824 NBPF9Q3BBW0 867 aa24■■□□□ 1.43
LMNA-225ENST00000515824 TBC1D22AQ8WUA7 517 aa24■■□□□ 1.43
LMNA-225ENST00000515824 GNL3LQ9NVN8 582 aaKnown RBP24■■□□□ 1.43
LMNA-225ENST00000515824 ASTN2O75129 1339 aaPredicted RBP24■■□□□ 1.43
LMNA-225ENST00000515824 CELF2O95319 508 aaKnown RBP23.99■■□□□ 1.43
LMNA-225ENST00000515824 DLGAP5Q15398 846 aa23.99■■□□□ 1.43
LMNA-225ENST00000515824 CST9Q5W186 159 aa23.99■■□□□ 1.43
LMNA-225ENST00000515824 ABT1Q9ULW3 272 aaKnown RBP23.99■■□□□ 1.43
LMNA-225ENST00000515824 PITPNM2Q9BZ72 1349 aa23.99■■□□□ 1.43
LMNA-225ENST00000515824 TIMM10P62072 90 aa23.98■■□□□ 1.43
LMNA-225ENST00000515824 ZNF408Q9H9D4 720 aa23.98■■□□□ 1.43
LMNA-225ENST00000515824 MKRN1Q9UHC7 482 aaKnown RBP23.98■■□□□ 1.43
LMNA-225ENST00000515824 ADM5C9JUS6 153 aa23.97■■□□□ 1.43
LMNA-225ENST00000515824 ZNF646O15015 1829 aaPredicted RBP23.97■■□□□ 1.43
LMNA-225ENST00000515824 SURF6O75683 361 aaKnown RBP23.97■■□□□ 1.43
LMNA-225ENST00000515824 OS9Q13438 667 aaPredicted RBP23.97■■□□□ 1.43
LMNA-225ENST00000515824 CEP85Q6P2H3 762 aa23.97■■□□□ 1.43
LMNA-225ENST00000515824 MTMR14Q8NCE2 650 aa23.97■■□□□ 1.43
LMNA-225ENST00000515824 TTF2Q9UNY4 1162 aaKnown RBP23.97■■□□□ 1.43
LMNA-225ENST00000515824 A0A1B0GUL7 405 aa23.96■■□□□ 1.43
LMNA-225ENST00000515824 DEFB115Q30KQ5 88 aa23.96■■□□□ 1.43
LMNA-225ENST00000515824 ZBED3Q96IU2 234 aaPredicted RBP23.96■■□□□ 1.43
LMNA-225ENST00000515824 RBM5P52756 815 aaKnown RBP eCLIP23.95■■□□□ 1.42
LMNA-225ENST00000515824 CFAP100Q494V2 611 aa23.95■■□□□ 1.42
LMNA-225ENST00000515824 WDR66Q8TBY9 1149 aa23.95■■□□□ 1.42
LMNA-225ENST00000515824 NEUROD6Q96NK8 337 aa23.95■■□□□ 1.42
LMNA-225ENST00000515824 ZBTB40Q9NUA8 1239 aa23.95■■□□□ 1.42
LMNA-225ENST00000515824 RASSF10A6NK89 507 aa23.94■■□□□ 1.42
LMNA-225ENST00000515824 MYO1BO43795 1136 aa23.94■■□□□ 1.42
LMNA-225ENST00000515824 ADORA1P30542 326 aa23.94■■□□□ 1.42
LMNA-225ENST00000515824 C20orf194Q5TEA3 1177 aa23.94■■□□□ 1.42
LMNA-225ENST00000515824 DLK2Q6UY11 383 aa23.94■■□□□ 1.42
LMNA-225ENST00000515824 XAGE2Q96GT9 111 aa23.94■■□□□ 1.42
LMNA-225ENST00000515824 SERPINA10Q9UK55 444 aa23.94■■□□□ 1.42
LMNA-225ENST00000515824 DENND2AQ9ULE3 1009 aa23.94■■□□□ 1.42
LMNA-225ENST00000515824 NOP58Q9Y2X3 529 aaKnown RBP23.94■■□□□ 1.42
LMNA-225ENST00000515824 SUGT1Q9Y2Z0 365 aa23.94■■□□□ 1.42
LMNA-225ENST00000515824 CNTNAP1P78357 1384 aa23.93■■□□□ 1.42
LMNA-225ENST00000515824 SEMA3EO15041 775 aa23.93■■□□□ 1.42
LMNA-225ENST00000515824 PHKA1P46020 1223 aa23.93■■□□□ 1.42
LMNA-225ENST00000515824 CCDC102BQ68D86 513 aa23.93■■□□□ 1.42
LMNA-225ENST00000515824 RPAP2Q8IXW5 612 aaPredicted RBP23.93■■□□□ 1.42
LMNA-225ENST00000515824 TLL2Q9Y6L7 1015 aa23.93■■□□□ 1.42
LMNA-225ENST00000515824 SPDYE2BA6NHP3 402 aa23.92■■□□□ 1.42
LMNA-225ENST00000515824 SPDYE6P0CI01 402 aa23.92■■□□□ 1.42
LMNA-225ENST00000515824 GORABQ5T7V8 394 aa23.92■■□□□ 1.42
LMNA-225ENST00000515824 APOBEC3FQ8IUX4 373 aaKnown RBP23.92■■□□□ 1.42
LMNA-225ENST00000515824 JMYQ8N9B5 988 aa23.92■■□□□ 1.42
LMNA-225ENST00000515824 PRMT6Q96LA8 375 aaPredicted RBP23.92■■□□□ 1.42
LMNA-225ENST00000515824 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.92■■□□□ 1.42
LMNA-225ENST00000515824 POLR2AP24928 1970 aaKnown RBP23.92■■□□□ 1.42
LMNA-225ENST00000515824 ZBTB22O15209 634 aa23.91■■□□□ 1.42
LMNA-225ENST00000515824 SAPCD2Q86UD0 394 aa23.91■■□□□ 1.42
LMNA-225ENST00000515824 C2orf69Q8N8R5 385 aa23.91■■□□□ 1.42
LMNA-225ENST00000515824 CDCA5Q96FF9 252 aa23.91■■□□□ 1.42
LMNA-225ENST00000515824 GPR108Q9NPR9 543 aa23.91■■□□□ 1.42
LMNA-225ENST00000515824 TRPM7Q96QT4 1865 aa23.9■■□□□ 1.42
LMNA-225ENST00000515824 HMMRO75330 724 aa23.9■■□□□ 1.42
LMNA-225ENST00000515824 CRKP46108 304 aa23.9■■□□□ 1.42
LMNA-225ENST00000515824 HDLBPQ00341 1268 aaKnown RBP23.9■■□□□ 1.42
LMNA-225ENST00000515824 GRIK5Q16478 980 aa23.9■■□□□ 1.42
LMNA-225ENST00000515824 GBA2Q9HCG7 927 aaPredicted RBP23.9■■□□□ 1.42
LMNA-225ENST00000515824 SCAF8Q9UPN6 1271 aaKnown RBP23.9■■□□□ 1.42
LMNA-225ENST00000515824 PCDHAC2Q9Y5I4 1007 aa23.9■■□□□ 1.42
LMNA-225ENST00000515824 MAST3O60307 1309 aa23.89■■□□□ 1.42
LMNA-225ENST00000515824 PAXIP1Q6ZW49 1069 aaPredicted RBP23.89■■□□□ 1.41
LMNA-225ENST00000515824 MRIQ9BWK5 157 aa23.89■■□□□ 1.41
LMNA-225ENST00000515824 VEGFBP49765 207 aa23.88■■□□□ 1.41
LMNA-225ENST00000515824 HSP90AB4PQ58FF6 505 aa23.88■■□□□ 1.41
LMNA-225ENST00000515824 TEKT1Q969V4 418 aa23.88■■□□□ 1.41
LMNA-225ENST00000515824 CLRN2A0PK11 232 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms