RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
CSNK1A1-206ENST00000515748 PI4KAP1Q8N8J0 262 aa11.9□□□□□ -0.5
CSNK1A1-206ENST00000515748 SSH1Q8WYL5 1049 aa11.9□□□□□ -0.5
CSNK1A1-206ENST00000515748 FAM122AQ96E09 287 aa11.9□□□□□ -0.5
CSNK1A1-206ENST00000515748 WNK4Q96J92 1243 aa11.9□□□□□ -0.5
CSNK1A1-206ENST00000515748 GMLQ99445 158 aa11.9□□□□□ -0.5
CSNK1A1-206ENST00000515748 ZC3H12CQ9C0D7 883 aaKnown RBP11.9□□□□□ -0.5
CSNK1A1-206ENST00000515748 NUP98P52948 1817 aa11.9□□□□□ -0.5
CSNK1A1-206ENST00000515748 ANKRD36CQ5JPF3 1778 aa11.9□□□□□ -0.51
CSNK1A1-206ENST00000515748 PTPRCP08575 1304 aa11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 G3V3G9 751 aa11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 GJA8P48165 433 aa11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 FKBP5Q13451 457 aaPredicted RBP11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 CCDC191Q8NCU4 936 aa11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 GDF15Q99988 308 aa11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 FZD1Q9UP38 647 aa11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 MAP3K2Q9Y2U5 619 aa11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 TTC28Q96AY4 2481 aa11.89□□□□□ -0.51
CSNK1A1-206ENST00000515748 SH3TC1Q8TE82 1336 aa11.88□□□□□ -0.51
CSNK1A1-206ENST00000515748 GJB1P08034 283 aa11.88□□□□□ -0.51
CSNK1A1-206ENST00000515748 BCAMP50895 628 aa11.88□□□□□ -0.51
CSNK1A1-206ENST00000515748 RARSP54136 660 aaKnown RBP11.88□□□□□ -0.51
CSNK1A1-206ENST00000515748 TBC1D16Q8TBP0 767 aa11.88□□□□□ -0.51
CSNK1A1-206ENST00000515748 DNAAF4Q8WXU2 420 aa11.88□□□□□ -0.51
CSNK1A1-206ENST00000515748 CLMNQ96JQ2 1002 aa11.88□□□□□ -0.51
CSNK1A1-206ENST00000515748 CACNA1FO60840 1977 aa11.88□□□□□ -0.51
CSNK1A1-206ENST00000515748 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
CSNK1A1-206ENST00000515748 RPTORQ8N122 1335 aa11.87□□□□□ -0.51
CSNK1A1-206ENST00000515748 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
CSNK1A1-206ENST00000515748 IGKV5-2P06315 115 aa11.87□□□□□ -0.51
CSNK1A1-206ENST00000515748 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
CSNK1A1-206ENST00000515748 NEXNQ0ZGT2 675 aa11.87□□□□□ -0.51
CSNK1A1-206ENST00000515748 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
CSNK1A1-206ENST00000515748 MYD88Q99836 296 aa11.87□□□□□ -0.51
CSNK1A1-206ENST00000515748 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
CSNK1A1-206ENST00000515748 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
CSNK1A1-206ENST00000515748 ATP5J2-PTCD1G3V325 749 aa11.86□□□□□ -0.51
CSNK1A1-206ENST00000515748 MAP3K11Q16584 847 aa11.86□□□□□ -0.51
CSNK1A1-206ENST00000515748 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
CSNK1A1-206ENST00000515748 SMC4Q9NTJ3 1288 aa11.86□□□□□ -0.51
CSNK1A1-206ENST00000515748 CWC25Q9NXE8 425 aaPredicted RBP11.86□□□□□ -0.51
CSNK1A1-206ENST00000515748 TRMT112Q9UI30 125 aaKnown RBP11.86□□□□□ -0.51
CSNK1A1-206ENST00000515748 WNT10BO00744 389 aa11.85□□□□□ -0.51
CSNK1A1-206ENST00000515748 PCCAP05165 728 aaPredicted RBP11.85□□□□□ -0.51
CSNK1A1-206ENST00000515748 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
CSNK1A1-206ENST00000515748 GJA5P36382 358 aa11.85□□□□□ -0.51
CSNK1A1-206ENST00000515748 BEND3Q5T5X7 828 aa11.85□□□□□ -0.51
CSNK1A1-206ENST00000515748 ARHGAP45Q92619 1136 aa11.85□□□□□ -0.51
CSNK1A1-206ENST00000515748 CELF1Q92879 486 aaKnown RBP11.85□□□□□ -0.51
CSNK1A1-206ENST00000515748 ARHGAP39Q9C0H5 1083 aa11.85□□□□□ -0.51
CSNK1A1-206ENST00000515748 ZFYVE28Q9HCC9 887 aa11.85□□□□□ -0.51
CSNK1A1-206ENST00000515748 USP17L3A6NCW0 530 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 USP17L4A6NCW7 530 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 UNCXA6NJT0 531 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 ALDH1L1O75891 902 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 FARP2O94887 1054 aaPredicted RBP11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 GNRH1P01148 92 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 CCL5P13501 91 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 PRMT2P55345 433 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 GCKRQ14397 625 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 KIF22Q14807 665 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 USP17L1Q7RTZ2 530 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 SYMPKQ92797 1274 aaKnown RBP11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 RNF208Q9H0X6 261 aa11.84□□□□□ -0.51
CSNK1A1-206ENST00000515748 F6X3S4 739 aa11.83□□□□□ -0.52
CSNK1A1-206ENST00000515748 PPP1R12BO60237 982 aaPredicted RBP11.83□□□□□ -0.52
CSNK1A1-206ENST00000515748 TAF1CQ15572 869 aaPredicted RBP11.83□□□□□ -0.52
CSNK1A1-206ENST00000515748 CWF19L2Q2TBE0 894 aaKnown RBP11.83□□□□□ -0.52
CSNK1A1-206ENST00000515748 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
CSNK1A1-206ENST00000515748 FAM89AQ96GI7 184 aa11.83□□□□□ -0.52
CSNK1A1-206ENST00000515748 LAMB2P55268 1798 aa11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 SCN9AQ15858 1988 aa11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 H7C1W4 665 aa11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 CASP7P55210 303 aa11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 LACTBP83111 547 aaPredicted RBP11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 SF3B3Q15393 1217 aaKnown RBP11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 FAM109BQ6ICB4 259 aaPredicted RBP11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 TDHQ8IZJ6 230 aa11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 U2AF1L4Q8WU68 220 aaKnown RBP11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 PLA2G12BQ9BX93 195 aa11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 API5Q9BZZ5 524 aaKnown RBP11.82□□□□□ -0.52
CSNK1A1-206ENST00000515748 IRS4O14654 1257 aaPredicted RBP11.81□□□□□ -0.52
CSNK1A1-206ENST00000515748 SGPL1O95470 568 aa11.81□□□□□ -0.52
CSNK1A1-206ENST00000515748 GRK4P32298 578 aa11.81□□□□□ -0.52
CSNK1A1-206ENST00000515748 APOBEC3FQ8IUX4 373 aaKnown RBP11.81□□□□□ -0.52
CSNK1A1-206ENST00000515748 SRCIN1Q9C0H9 1055 aa11.81□□□□□ -0.52
CSNK1A1-206ENST00000515748 DEFB129Q9H1M3 183 aa11.81□□□□□ -0.52
CSNK1A1-206ENST00000515748 PODXL2Q9NZ53 605 aa11.81□□□□□ -0.52
CSNK1A1-206ENST00000515748 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
CSNK1A1-206ENST00000515748 UTYO14607 1347 aa11.81□□□□□ -0.52
CSNK1A1-206ENST00000515748 TNFRSF10AO00220 468 aa11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 IPO8O15397 1037 aaKnown RBP11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 SASH1O94885 1247 aa11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 RPS8P62241 208 aaKnown RBP11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 PODNQ7Z5L7 613 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms