RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 SCNN1DP51172 638 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 AACSQ86V21 672 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 TBC1D22AQ8WUA7 517 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 EAF2Q96CJ1 260 aaPredicted RBP14.62□□□□□ -0.07
SNF8-215ENST00000515572 RRAGCQ9HB90 399 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 IL1RAPL2Q9NP60 686 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 NMRK2Q9NPI5 230 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 GPRC5DQ9NZD1 345 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 HACL1Q9UJ83 578 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 PDS5AQ29RF7 1337 aaKnown RBP14.62□□□□□ -0.07
SNF8-215ENST00000515572 UQCRFS1P1P0C7P4 283 aa14.61□□□□□ -0.07
SNF8-215ENST00000515572 CCDC158Q5M9N0 1113 aa14.61□□□□□ -0.07
SNF8-215ENST00000515572 WDR66Q8TBY9 1149 aa14.61□□□□□ -0.07
SNF8-215ENST00000515572 DBNDD2Q9BQY9 259 aa14.61□□□□□ -0.07
SNF8-215ENST00000515572 DBNLQ9UJU6 430 aaKnown RBP14.61□□□□□ -0.07
SNF8-215ENST00000515572 DENND2AQ9ULE3 1009 aa14.61□□□□□ -0.07
SNF8-215ENST00000515572 IQSEC3Q9UPP2 1182 aaPredicted RBP14.61□□□□□ -0.07
SNF8-215ENST00000515572 ZBTB12Q9Y330 459 aaPredicted RBP14.61□□□□□ -0.07
SNF8-215ENST00000515572 POTECB2RU33 542 aa14.6□□□□□ -0.07
SNF8-215ENST00000515572 IFIT2P09913 472 aaKnown RBP14.6□□□□□ -0.07
SNF8-215ENST00000515572 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
SNF8-215ENST00000515572 ZNF512BQ96KM6 892 aaPredicted RBP14.6□□□□□ -0.07
SNF8-215ENST00000515572 GMLQ99445 158 aa14.6□□□□□ -0.07
SNF8-215ENST00000515572 CCDC8Q9H0W5 538 aaPredicted RBP14.6□□□□□ -0.07
SNF8-215ENST00000515572 ZBTB47Q9UFB7 747 aaPredicted RBP14.6□□□□□ -0.07
SNF8-215ENST00000515572 CNOT7Q9UIV1 285 aaKnown RBP14.6□□□□□ -0.07
SNF8-215ENST00000515572 AKAP11Q9UKA4 1901 aa14.59□□□□□ -0.07
SNF8-215ENST00000515572 H7C1D1 291 aa14.59□□□□□ -0.07
SNF8-215ENST00000515572 USP17L8P0C7I0 530 aa14.59□□□□□ -0.07
SNF8-215ENST00000515572 EPHX2P34913 555 aa14.59□□□□□ -0.07
SNF8-215ENST00000515572 CHAF1AQ13111 956 aaPredicted RBP14.59□□□□□ -0.07
SNF8-215ENST00000515572 RASGRF1Q13972 1273 aa14.59□□□□□ -0.07
SNF8-215ENST00000515572 MFSD14BQ5SR56 506 aa14.59□□□□□ -0.07
SNF8-215ENST00000515572 TTC39AQ5SRH9 613 aa14.59□□□□□ -0.07
SNF8-215ENST00000515572 PNMA8AQ86V59 439 aaPredicted RBP14.59□□□□□ -0.07
SNF8-215ENST00000515572 C16orf71Q8IYS4 520 aaPredicted RBP14.59□□□□□ -0.07
SNF8-215ENST00000515572 OGFOD1Q8N543 542 aa14.59□□□□□ -0.07
SNF8-215ENST00000515572 TAF1DQ9H5J8 278 aaPredicted RBP14.59□□□□□ -0.07
SNF8-215ENST00000515572 ADARB2Q9NS39 739 aaKnown RBP14.59□□□□□ -0.07
SNF8-215ENST00000515572 COL1A1P02452 1464 aaPredicted RBP14.58□□□□□ -0.08
SNF8-215ENST00000515572 KIF3CO14782 793 aa14.58□□□□□ -0.08
SNF8-215ENST00000515572 EPS15P42566 896 aa14.58□□□□□ -0.08
SNF8-215ENST00000515572 ZNF280AP59817 542 aaPredicted RBP14.58□□□□□ -0.08
SNF8-215ENST00000515572 SMC5Q8IY18 1101 aa14.58□□□□□ -0.08
SNF8-215ENST00000515572 MICALL2Q8IY33 904 aa14.58□□□□□ -0.08
SNF8-215ENST00000515572 ZGPATQ8N5A5 531 aaKnown RBP14.58□□□□□ -0.08
SNF8-215ENST00000515572 CERS5Q8N5B7 392 aa14.58□□□□□ -0.08
SNF8-215ENST00000515572 TLR7Q9NYK1 1049 aaKnown RBP14.58□□□□□ -0.08
SNF8-215ENST00000515572 HDAC9Q9UKV0 1011 aa14.58□□□□□ -0.08
SNF8-215ENST00000515572 JAG2Q9Y219 1238 aa14.58□□□□□ -0.08
SNF8-215ENST00000515572 SUGT1Q9Y2Z0 365 aa14.58□□□□□ -0.08
SNF8-215ENST00000515572 SALL1Q9NSC2 1324 aa14.58□□□□□ -0.08
SNF8-215ENST00000515572 IGHDP01880 384 aa14.57□□□□□ -0.08
SNF8-215ENST00000515572 USP50Q70EL3 339 aaPredicted RBP14.57□□□□□ -0.08
SNF8-215ENST00000515572 SPATA5Q8NB90 893 aa14.57□□□□□ -0.08
SNF8-215ENST00000515572 MXD3Q9BW11 206 aa14.57□□□□□ -0.08
SNF8-215ENST00000515572 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
SNF8-215ENST00000515572 SMARCA5O60264 1052 aaPredicted RBP14.56□□□□□ -0.08
SNF8-215ENST00000515572 ANKRD45Q5TZF3 282 aa14.56□□□□□ -0.08
SNF8-215ENST00000515572 KIAA0825Q8IV33 1275 aa14.56□□□□□ -0.08
SNF8-215ENST00000515572 GPATCH3Q96I76 525 aa14.56□□□□□ -0.08
SNF8-215ENST00000515572 HMG20BQ9P0W2 317 aa14.56□□□□□ -0.08
SNF8-215ENST00000515572 ECM29Q5VYK3 1845 aa14.56□□□□□ -0.08
SNF8-215ENST00000515572 MAST3O60307 1309 aa14.56□□□□□ -0.08
SNF8-215ENST00000515572 MCAMP43121 646 aa14.55□□□□□ -0.08
SNF8-215ENST00000515572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.55□□□□□ -0.08
SNF8-215ENST00000515572 BCL11AQ9H165 835 aa14.55□□□□□ -0.08
SNF8-215ENST00000515572 MYOZ2Q9NPC6 264 aa14.55□□□□□ -0.08
SNF8-215ENST00000515572 SHTN1A0MZ66 631 aa14.54□□□□□ -0.08
SNF8-215ENST00000515572 IGSF3O75054 1194 aa14.54□□□□□ -0.08
SNF8-215ENST00000515572 TOMM70O94826 608 aa14.54□□□□□ -0.08
SNF8-215ENST00000515572 LDHBP07195 334 aaKnown RBP14.54□□□□□ -0.08
SNF8-215ENST00000515572 HDLBPQ00341 1268 aaKnown RBP14.54□□□□□ -0.08
SNF8-215ENST00000515572 SCARF1Q14162 830 aa14.54□□□□□ -0.08
SNF8-215ENST00000515572 KIF4BQ2VIQ3 1234 aa14.54□□□□□ -0.08
SNF8-215ENST00000515572 ERICH6BQ5W0A0 696 aa14.54□□□□□ -0.08
SNF8-215ENST00000515572 SPTY2D1Q68D10 685 aaPredicted RBP14.54□□□□□ -0.08
SNF8-215ENST00000515572 LDHDQ86WU2 507 aa14.54□□□□□ -0.08
SNF8-215ENST00000515572 SERPINA10Q9UK55 444 aa14.54□□□□□ -0.08
SNF8-215ENST00000515572 TTF2Q9UNY4 1162 aaKnown RBP14.54□□□□□ -0.08
SNF8-215ENST00000515572 DOCK2Q92608 1830 aa14.53□□□□□ -0.08
SNF8-215ENST00000515572 MAST2Q6P0Q8 1798 aa14.53□□□□□ -0.08
SNF8-215ENST00000515572 ATP5JP18859 108 aa14.53□□□□□ -0.08
SNF8-215ENST00000515572 EAPPQ56P03 285 aaPredicted RBP14.53□□□□□ -0.08
SNF8-215ENST00000515572 SAMD7Q7Z3H4 446 aa14.53□□□□□ -0.08
SNF8-215ENST00000515572 RBM46Q8TBY0 533 aaKnown RBP14.53□□□□□ -0.08
SNF8-215ENST00000515572 ZC3H15Q8WU90 426 aaKnown RBP14.53□□□□□ -0.08
SNF8-215ENST00000515572 MRIQ9BWK5 157 aa14.53□□□□□ -0.08
SNF8-215ENST00000515572 ECHDC1Q9NTX5 307 aa14.53□□□□□ -0.08
SNF8-215ENST00000515572 MYH2Q9UKX2 1941 aa14.53□□□□□ -0.08
SNF8-215ENST00000515572 TTC41PQ6P2S7 1318 aa14.52□□□□□ -0.08
SNF8-215ENST00000515572 F8W031 263 aaPredicted RBP14.52□□□□□ -0.09
SNF8-215ENST00000515572 NUCB1Q02818 461 aa14.52□□□□□ -0.09
SNF8-215ENST00000515572 TBC1D10BQ4KMP7 808 aaPredicted RBP14.52□□□□□ -0.09
SNF8-215ENST00000515572 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.09
SNF8-215ENST00000515572 PI16Q6UXB8 463 aa14.52□□□□□ -0.09
SNF8-215ENST00000515572 MTMR14Q8NCE2 650 aa14.52□□□□□ -0.09
SNF8-215ENST00000515572 TRPM4Q8TD43 1214 aa14.52□□□□□ -0.09
SNF8-215ENST00000515572 ABCF2Q9UG63 623 aa14.52□□□□□ -0.09
SNF8-215ENST00000515572 MYO5AQ9Y4I1 1855 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms