RNA–Protein interactions for RNA: ENST00000515339.5

PACRGL-233, Transcript of parkin coregulated like, human

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-233	ENST00000515339	CAPN15	O75808	1086 aa		27.72	■■■□□ 2.03
PACRGL-233	ENST00000515339	NOG	Q13253	232 aa		27.72	■■■□□ 2.03
PACRGL-233	ENST00000515339	ZBED3	Q96IU2	234 aa	Predicted RBP	27.72	■■■□□ 2.03
PACRGL-233	ENST00000515339	TSKS	Q9UJT2	592 aa		27.72	■■■□□ 2.03
PACRGL-233	ENST00000515339	PAPPA2	Q9BXP8	1791 aa		27.72	■■■□□ 2.03
PACRGL-233	ENST00000515339	ZNF157	P51786	506 aa	Predicted RBP	27.71	■■■□□ 2.03
PACRGL-233	ENST00000515339	BRPF1	P55201	1214 aa	Predicted RBP	27.71	■■■□□ 2.03
PACRGL-233	ENST00000515339	METTL24	Q5JXM2	366 aa		27.71	■■■□□ 2.03
PACRGL-233	ENST00000515339	MIER1	Q8N108	512 aa		27.71	■■■□□ 2.03
PACRGL-233	ENST00000515339	FAM84B	Q96KN1	310 aa	Predicted RBP	27.71	■■■□□ 2.03
PACRGL-233	ENST00000515339	RARS	P54136	660 aa	Known RBP	27.7	■■■□□ 2.02
PACRGL-233	ENST00000515339	PCDHAC2	Q9Y5I4	1007 aa		27.7	■■■□□ 2.02
PACRGL-233	ENST00000515339	ECM29	Q5VYK3	1845 aa		27.69	■■■□□ 2.02
PACRGL-233	ENST00000515339	HIBADH	P31937	336 aa	Known RBP	27.69	■■■□□ 2.02
PACRGL-233	ENST00000515339	MOB2	Q70IA6	237 aa		27.69	■■■□□ 2.02
PACRGL-233	ENST00000515339	FKBP1A	P62942	108 aa	Known RBP	27.68	■■■□□ 2.02
PACRGL-233	ENST00000515339	DLGAP5	Q15398	846 aa		27.68	■■■□□ 2.02
PACRGL-233	ENST00000515339	VGLL2	Q8N8G2	317 aa		27.68	■■■□□ 2.02
PACRGL-233	ENST00000515339	TDRD7	Q8NHU6	1098 aa	Known RBP	27.68	■■■□□ 2.02
PACRGL-233	ENST00000515339	CCDC102A	Q96A19	550 aa		27.68	■■■□□ 2.02
PACRGL-233	ENST00000515339	API5	Q9BZZ5	524 aa	Known RBP	27.68	■■■□□ 2.02
PACRGL-233	ENST00000515339	FAM205A	Q6ZU69	1335 aa		27.67	■■■□□ 2.02
PACRGL-233	ENST00000515339	ARAP2	Q8WZ64	1704 aa		27.67	■■■□□ 2.02
PACRGL-233	ENST00000515339	SLC10A3	P09131	477 aa		27.66	■■■□□ 2.02
PACRGL-233	ENST00000515339	UBTFL1	P0CB47	393 aa	Predicted RBP	27.66	■■■□□ 2.02
PACRGL-233	ENST00000515339	RFX5	P48382	616 aa	Predicted RBP	27.66	■■■□□ 2.02
PACRGL-233	ENST00000515339	FKBP1B	P68106	108 aa		27.66	■■■□□ 2.02
PACRGL-233	ENST00000515339	DIEXF	Q68CQ4	756 aa	Known RBP	27.66	■■■□□ 2.02
PACRGL-233	ENST00000515339	APOBEC3F	Q8IUX4	373 aa	Known RBP	27.66	■■■□□ 2.02
PACRGL-233	ENST00000515339	PDE8B	O95263	885 aa		27.65	■■■□□ 2.02
PACRGL-233	ENST00000515339	CFAP100	Q494V2	611 aa		27.65	■■■□□ 2.02
PACRGL-233	ENST00000515339	MTMR14	Q8NCE2	650 aa		27.65	■■■□□ 2.02
PACRGL-233	ENST00000515339	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	27.65	■■■□□ 2.02
PACRGL-233	ENST00000515339	UBE2Q2L	H0YL09	131 aa		27.64	■■■□□ 2.02
PACRGL-233	ENST00000515339	KIF23	Q02241	960 aa	Predicted RBP	27.64	■■■□□ 2.02
PACRGL-233	ENST00000515339	TTLL12	Q14166	644 aa	Predicted RBP	27.64	■■■□□ 2.02
PACRGL-233	ENST00000515339	MFSD14B	Q5SR56	506 aa		27.64	■■■□□ 2.02
PACRGL-233	ENST00000515339	FBXO33	Q7Z6M2	555 aa		27.64	■■■□□ 2.02
PACRGL-233	ENST00000515339	KIF16B	Q96L93	1317 aa		27.64	■■■□□ 2.01
PACRGL-233	ENST00000515339	CA12	O43570	354 aa		27.63	■■■□□ 2.01
PACRGL-233	ENST00000515339	PTPN12	Q05209	780 aa	Known RBP	27.63	■■■□□ 2.01
PACRGL-233	ENST00000515339	VPS37D	Q86XT2	251 aa		27.63	■■■□□ 2.01
PACRGL-233	ENST00000515339	RASAL3	Q86YV0	1011 aa		27.63	■■■□□ 2.01
PACRGL-233	ENST00000515339	AOX1	Q06278	1338 aa		27.63	■■■□□ 2.01
PACRGL-233	ENST00000515339	SPDYE2B	A6NHP3	402 aa		27.62	■■■□□ 2.01
PACRGL-233	ENST00000515339	EYA2	O00167	538 aa		27.62	■■■□□ 2.01
PACRGL-233	ENST00000515339	SPDYE6	P0CI01	402 aa		27.62	■■■□□ 2.01
PACRGL-233	ENST00000515339	NF2	P35240	595 aa		27.62	■■■□□ 2.01
PACRGL-233	ENST00000515339	PRMT6	Q96LA8	375 aa	Predicted RBP	27.62	■■■□□ 2.01
PACRGL-233	ENST00000515339	LRRFIP2	Q9Y608	721 aa	Known RBP	27.62	■■■□□ 2.01
PACRGL-233	ENST00000515339	CLRN2	A0PK11	232 aa		27.61	■■■□□ 2.01
PACRGL-233	ENST00000515339	RBM5	P52756	815 aa	Known RBP eCLIP	27.61	■■■□□ 2.01
PACRGL-233	ENST00000515339	MEIS3	Q99687	375 aa		27.61	■■■□□ 2.01
PACRGL-233	ENST00000515339	BCAM	P50895	628 aa		27.6	■■■□□ 2.01
PACRGL-233	ENST00000515339	CHAF1A	Q13111	956 aa	Predicted RBP	27.6	■■■□□ 2.01
PACRGL-233	ENST00000515339	PRKG1	Q13976	671 aa		27.6	■■■□□ 2.01
PACRGL-233	ENST00000515339	PUM3	Q15397	648 aa	Known RBP	27.6	■■■□□ 2.01
PACRGL-233	ENST00000515339	CAVIN4	Q5BKX8	364 aa		27.6	■■■□□ 2.01
PACRGL-233	ENST00000515339	DEFB129	Q9H1M3	183 aa		27.6	■■■□□ 2.01
PACRGL-233	ENST00000515339	TTF2	Q9UNY4	1162 aa	Known RBP	27.6	■■■□□ 2.01
PACRGL-233	ENST00000515339	AKAP11	Q9UKA4	1901 aa		27.59	■■■□□ 2.01
PACRGL-233	ENST00000515339	COL1A1	P02452	1464 aa	Predicted RBP	27.59	■■■□□ 2.01
PACRGL-233	ENST00000515339	CASP8AP2	Q9UKL3	1982 aa		27.59	■■■□□ 2.01
PACRGL-233	ENST00000515339	FGFR2	P21802	821 aa		27.59	■■■□□ 2.01
PACRGL-233	ENST00000515339	HNRNPU	Q00839	825 aa	Known RBP eCLIP	27.59	■■■□□ 2.01
PACRGL-233	ENST00000515339	ATG9A	Q7Z3C6	839 aa		27.59	■■■□□ 2.01
PACRGL-233	ENST00000515339	ARHGAP45	Q92619	1136 aa		27.59	■■■□□ 2.01
PACRGL-233	ENST00000515339	SIL1	Q9H173	461 aa		27.59	■■■□□ 2.01
PACRGL-233	ENST00000515339	VEZT	Q9HBM0	779 aa		27.59	■■■□□ 2.01
PACRGL-233	ENST00000515339	MYO1B	O43795	1136 aa		27.58	■■■□□ 2.01
PACRGL-233	ENST00000515339	FRAT2	O75474	233 aa	Predicted RBP	27.58	■■■□□ 2.01
PACRGL-233	ENST00000515339	GRIK5	Q16478	980 aa		27.58	■■■□□ 2.01
PACRGL-233	ENST00000515339	BCAR3	O75815	825 aa		27.57	■■■□□ 2
PACRGL-233	ENST00000515339	IFIT1	P09914	478 aa	Known RBP	27.57	■■■□□ 2
PACRGL-233	ENST00000515339	INTS3	Q68E01	1043 aa	Known RBP	27.57	■■■□□ 2
PACRGL-233	ENST00000515339	CSRNP1	Q96S65	589 aa		27.57	■■■□□ 2
PACRGL-233	ENST00000515339	FZD1	Q9UP38	647 aa		27.57	■■■□□ 2
PACRGL-233	ENST00000515339	TNN	Q9UQP3	1299 aa		27.57	■■■□□ 2
PACRGL-233	ENST00000515339	MYH13	Q9UKX3	1938 aa		27.57	■■■□□ 2
PACRGL-233	ENST00000515339	SERPINA10	Q9UK55	444 aa		27.56	■■■□□ 2
PACRGL-233	ENST00000515339	SSC5D	A1L4H1	1573 aa		27.56	■■■□□ 2
PACRGL-233	ENST00000515339	FRAT1	Q92837	279 aa	Predicted RBP	27.55	■■■□□ 2
PACRGL-233	ENST00000515339	PA2G4	Q9UQ80	394 aa	Known RBP	27.55	■■■□□ 2
PACRGL-233	ENST00000515339	SLC5A1	P13866	664 aa		27.54	■■■□□ 2
PACRGL-233	ENST00000515339	TRIM27	P14373	513 aa		27.54	■■■□□ 2
PACRGL-233	ENST00000515339	ARMC9	Q7Z3E5	817 aa		27.54	■■■□□ 2
PACRGL-233	ENST00000515339	RNF186	Q9NXI6	227 aa		27.54	■■■□□ 2
PACRGL-233	ENST00000515339	HDAC5	Q9UQL6	1122 aa		27.54	■■■□□ 2
PACRGL-233	ENST00000515339	TRPA1	O75762	1119 aa		27.53	■■■□□ 2
PACRGL-233	ENST00000515339	CIAO1	O76071	339 aa		27.53	■■■□□ 2
PACRGL-233	ENST00000515339	LPIN2	Q92539	896 aa		27.53	■■■□□ 2
PACRGL-233	ENST00000515339	ANGEL1	Q9UNK9	670 aa	Known RBP	27.53	■■■□□ 2
PACRGL-233	ENST00000515339	PPP2R3B	Q9Y5P8	575 aa		27.53	■■■□□ 2
PACRGL-233	ENST00000515339	IPO8	O15397	1037 aa	Known RBP	27.52	■■■□□ 2
PACRGL-233	ENST00000515339	CRK	P46108	304 aa		27.52	■■■□□ 2
PACRGL-233	ENST00000515339	SPDYE2	Q495Y8	402 aa		27.52	■■■□□ 2
PACRGL-233	ENST00000515339	DZIP1L	Q8IYY4	767 aa	Known RBP	27.52	■■■□□ 2
PACRGL-233	ENST00000515339	TBC1D22A	Q8WUA7	517 aa		27.52	■■■□□ 2
PACRGL-233	ENST00000515339	TDRD3	Q9H7E2	651 aa	Known RBP	27.52	■■■□□ 2
PACRGL-233	ENST00000515339	SAGE1	Q9NXZ1	904 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms