RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 TTLL6Q8N841 843 aa15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 TDRD7Q8NHU6 1098 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 C6orf229H3BNL8 230 aa15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 RNF113AO15541 343 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 SLFNL1Q499Z3 407 aa15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 ZMYM1Q5SVZ6 1142 aa15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 ZNF804AQ7Z570 1209 aa15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 TMX4Q9H1E5 349 aaPredicted RBP15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 CHD4Q14839 1912 aa15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 GOLGB1Q14789 3259 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 IL1R1P14778 569 aa15.13■□□□□ 0.01
SNCAIP-221ENST00000515215 LRRFIP1Q32MZ4 808 aaKnown RBP15.13■□□□□ 0.01
SNCAIP-221ENST00000515215 RTFDC1Q9BY42 306 aaPredicted RBP15.13■□□□□ 0.01
SNCAIP-221ENST00000515215 LSG1Q9H089 658 aaKnown RBP15.13■□□□□ 0.01
SNCAIP-221ENST00000515215 CD209Q9NNX6 404 aa15.13■□□□□ 0.01
SNCAIP-221ENST00000515215 ADD2P35612 726 aa15.12■□□□□ 0.01
SNCAIP-221ENST00000515215 ZNF589Q86UQ0 364 aaPredicted RBP15.12■□□□□ 0.01
SNCAIP-221ENST00000515215 SEC62Q99442 399 aaKnown RBP15.12■□□□□ 0.01
SNCAIP-221ENST00000515215 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNCAIP-221ENST00000515215 ANO2Q9NQ90 1003 aa15.12■□□□□ 0.01
SNCAIP-221ENST00000515215 HELLSQ9NRZ9 838 aa15.12■□□□□ 0.01
SNCAIP-221ENST00000515215 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
SNCAIP-221ENST00000515215 MCMDC2Q4G0Z9 681 aa15.12■□□□□ 0.01
SNCAIP-221ENST00000515215 WWC3Q9ULE0 1092 aa15.12■□□□□ 0.01
SNCAIP-221ENST00000515215 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 C21orf2O43822 256 aa15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 UBE3CQ15386 1083 aa15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 ZSCAN25Q6NSZ9 544 aa15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 APPBP2Q92624 585 aa15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 OSBP2Q969R2 916 aa15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 SPON1Q9HCB6 807 aa15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 PIM2Q9P1W9 311 aa15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 MAST3O60307 1309 aa15.11■□□□□ 0.01
SNCAIP-221ENST00000515215 MAST2Q6P0Q8 1798 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 CCDC88AQ3V6T2 1871 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 FRAT2O75474 233 aaPredicted RBP15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 PDE6AP16499 860 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 MAP3K12Q12852 859 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 WASHC4Q2M389 1173 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 GRIPAP1Q4V328 841 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 SLC9C2Q5TAH2 1124 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 EYA3Q99504 573 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 ZC3H12CQ9C0D7 883 aaKnown RBP15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 CCDC171Q6TFL3 1326 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
SNCAIP-221ENST00000515215 M0R2C6 588 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 RIMBP2O15034 1052 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 PTH1RQ03431 593 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 CCDC93Q567U6 631 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 CCDC129Q6ZRS4 1044 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 KIF2CQ99661 725 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 COA1Q9GZY4 146 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 FER1L6Q2WGJ9 1857 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 CHAF1AQ13111 956 aaPredicted RBP15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 PUS7LQ9H0K6 701 aaKnown RBP15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 LRP2BPQ9P2M1 347 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 ABCF2Q9UG63 623 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 ZNF532Q9HCE3 1301 aa15.09■□□□□ 0.01
SNCAIP-221ENST00000515215 ZNF646O15015 1829 aaPredicted RBP15.08■□□□□ 0.01
SNCAIP-221ENST00000515215 KIAA1211Q6ZU35 1233 aa15.08■□□□□ 0
SNCAIP-221ENST00000515215 FAM205AQ6ZU69 1335 aa15.08■□□□□ 0
SNCAIP-221ENST00000515215 RTKN2Q8IZC4 609 aa15.08■□□□□ 0
SNCAIP-221ENST00000515215 MAGEB6Q8N7X4 407 aa15.08■□□□□ 0
SNCAIP-221ENST00000515215 WDR66Q8TBY9 1149 aa15.08■□□□□ 0
SNCAIP-221ENST00000515215 MAP4K1Q92918 833 aa15.08■□□□□ 0
SNCAIP-221ENST00000515215 PPP1R1BQ9UD71 204 aaPredicted RBP15.08■□□□□ 0
SNCAIP-221ENST00000515215 ARFGEF1Q9Y6D6 1849 aa15.07■□□□□ 0
SNCAIP-221ENST00000515215 IGSF3O75054 1194 aa15.07■□□□□ 0
SNCAIP-221ENST00000515215 HSPA4P34932 840 aa15.07■□□□□ 0
SNCAIP-221ENST00000515215 DALRD3Q5D0E6 543 aaKnown RBP15.07■□□□□ 0
SNCAIP-221ENST00000515215 SUPT20HQ8NEM7 779 aa15.07■□□□□ 0
SNCAIP-221ENST00000515215 ZNF384Q8TF68 577 aa15.07■□□□□ 0
SNCAIP-221ENST00000515215 PSMD1Q99460 953 aa15.07■□□□□ 0
SNCAIP-221ENST00000515215 JAG2Q9Y219 1238 aa15.07■□□□□ 0
SNCAIP-221ENST00000515215 SCN9AQ15858 1988 aa15.07■□□□□ 0
SNCAIP-221ENST00000515215 PRDX5P30044 214 aa15.06■□□□□ 0
SNCAIP-221ENST00000515215 KIAA2012Q0VF49 1180 aa15.06■□□□□ 0
SNCAIP-221ENST00000515215 SOGA3Q5TF21 947 aa15.06■□□□□ 0
SNCAIP-221ENST00000515215 KLHL34Q8N239 644 aa15.06■□□□□ 0
SNCAIP-221ENST00000515215 ZGPATQ8N5A5 531 aaKnown RBP15.06■□□□□ 0
SNCAIP-221ENST00000515215 NSUN4Q96CB9 384 aaKnown RBP15.06■□□□□ 0
SNCAIP-221ENST00000515215 IL17RAQ96F46 866 aa15.06■□□□□ 0
SNCAIP-221ENST00000515215 ANP32AP39687 249 aaKnown RBP15.06■□□□□ 0
SNCAIP-221ENST00000515215 NLGN2Q8NFZ4 835 aa15.06■□□□□ 0
SNCAIP-221ENST00000515215 RAI14Q9P0K7 980 aa15.06■□□□□ 0
SNCAIP-221ENST00000515215 PALD1Q9ULE6 856 aa15.06■□□□□ 0
SNCAIP-221ENST00000515215 PSME4Q14997 1843 aa15.05■□□□□ 0
SNCAIP-221ENST00000515215 FOXP2O15409 715 aa15.05■□□□□ -0
SNCAIP-221ENST00000515215 GPAA1O43292 621 aa15.05■□□□□ -0
SNCAIP-221ENST00000515215 NECTIN1Q15223 517 aa15.05■□□□□ -0
SNCAIP-221ENST00000515215 DOK7Q18PE1 504 aa15.05■□□□□ -0
SNCAIP-221ENST00000515215 VPS53Q5VIR6 699 aa15.05■□□□□ -0
SNCAIP-221ENST00000515215 TMED8Q6PL24 325 aaPredicted RBP15.05■□□□□ -0
SNCAIP-221ENST00000515215 PODNQ7Z5L7 613 aa15.05■□□□□ -0
SNCAIP-221ENST00000515215 ADGRA1Q86SQ6 560 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms