RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 PPP1R12BO60237 982 aaPredicted RBP13.77□□□□□ -0.21
NEDD9-215ENST00000514660 PDE8AO60658 829 aa13.77□□□□□ -0.21
NEDD9-215ENST00000514660 CCDC152Q4G0S7 254 aa13.77□□□□□ -0.21
NEDD9-215ENST00000514660 OTUD7BQ6GQQ9 843 aa13.77□□□□□ -0.21
NEDD9-215ENST00000514660 COA1Q9GZY4 146 aa13.77□□□□□ -0.21
NEDD9-215ENST00000514660 STAP2Q9UGK3 403 aa13.77□□□□□ -0.21
NEDD9-215ENST00000514660 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
NEDD9-215ENST00000514660 CHL1O00533 1208 aa13.76□□□□□ -0.21
NEDD9-215ENST00000514660 PCCAP05165 728 aaPredicted RBP13.76□□□□□ -0.21
NEDD9-215ENST00000514660 RIPK4P57078 832 aa13.76□□□□□ -0.21
NEDD9-215ENST00000514660 HDGFL1Q5TGJ6 251 aa13.76□□□□□ -0.21
NEDD9-215ENST00000514660 ANKRD13AQ8IZ07 590 aa13.76□□□□□ -0.21
NEDD9-215ENST00000514660 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
NEDD9-215ENST00000514660 BABAM1Q9NWV8 329 aa13.76□□□□□ -0.21
NEDD9-215ENST00000514660 MYH3P11055 1940 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 CCL15-CCL14A0A0B4J2E2 113 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 UNCXA6NJT0 531 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 GJA8P48165 433 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 LACTBP83111 547 aaPredicted RBP13.75□□□□□ -0.21
NEDD9-215ENST00000514660 RASA3Q14644 834 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 DLGAP5Q15398 846 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 CCL15Q16663 113 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 MTMR14Q8NCE2 650 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 MYD88Q99836 296 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 GREM2Q9H772 168 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 ZFYVE28Q9HCC9 887 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 UNC80Q8N2C7 3258 aa13.75□□□□□ -0.21
NEDD9-215ENST00000514660 SPDYE2BA6NHP3 402 aa13.74□□□□□ -0.21
NEDD9-215ENST00000514660 SPDYE6P0CI01 402 aa13.74□□□□□ -0.21
NEDD9-215ENST00000514660 IREB2P48200 963 aaKnown RBP13.74□□□□□ -0.21
NEDD9-215ENST00000514660 CFAP100Q494V2 611 aa13.74□□□□□ -0.21
NEDD9-215ENST00000514660 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
NEDD9-215ENST00000514660 TEPSINQ96N21 525 aa13.74□□□□□ -0.21
NEDD9-215ENST00000514660 BSDC1Q9NW68 430 aaPredicted RBP13.74□□□□□ -0.21
NEDD9-215ENST00000514660 PPP2R3BQ9Y5P8 575 aa13.74□□□□□ -0.21
NEDD9-215ENST00000514660 A0A1W2PPC1 479 aa13.73□□□□□ -0.21
NEDD9-215ENST00000514660 F8W031 263 aaPredicted RBP13.73□□□□□ -0.21
NEDD9-215ENST00000514660 TLR2O60603 784 aa13.73□□□□□ -0.21
NEDD9-215ENST00000514660 NEFMP07197 916 aa13.73□□□□□ -0.21
NEDD9-215ENST00000514660 TMPOP42166 694 aaKnown RBP13.73□□□□□ -0.21
NEDD9-215ENST00000514660 VGLL4Q14135 290 aa13.73□□□□□ -0.21
NEDD9-215ENST00000514660 SUPT20HL1Q3ZLR7 823 aa13.73□□□□□ -0.21
NEDD9-215ENST00000514660 TRIM47Q96LD4 638 aa13.73□□□□□ -0.21
NEDD9-215ENST00000514660 VEZTQ9HBM0 779 aa13.73□□□□□ -0.21
NEDD9-215ENST00000514660 DBF4Q9UBU7 674 aaPredicted RBP13.73□□□□□ -0.21
NEDD9-215ENST00000514660 BTBD19C9JJ37 291 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 GJB1P08034 283 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 CCL5P13501 91 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 MMP14P50281 582 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 CTSWP56202 376 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 DEFB123Q8N688 67 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 CD209Q9NNX6 404 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 MTMR10Q9NXD2 777 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 JAG2Q9Y219 1238 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 A0A1B0GUL6 1792 aa13.72□□□□□ -0.21
NEDD9-215ENST00000514660 MAPK8IP3Q9UPT6 1336 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 ARAP2Q8WZ64 1704 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 OSBPP22059 807 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 C17orf99Q6UX52 265 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 RIC3Q7Z5B4 369 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 CCDC191Q8NCU4 936 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 CCER1Q8TC90 406 aaPredicted RBP13.71□□□□□ -0.21
NEDD9-215ENST00000514660 HYPKQ9NX55 129 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 SRRDQ9UH36 339 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 TRIM35Q9UPQ4 493 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 STXBP5LQ9Y2K9 1186 aa13.71□□□□□ -0.21
NEDD9-215ENST00000514660 ADGRA2Q96PE1 1338 aa13.7□□□□□ -0.22
NEDD9-215ENST00000514660 FARP2O94887 1054 aaPredicted RBP13.7□□□□□ -0.22
NEDD9-215ENST00000514660 DUSP27Q5VZP5 1158 aa13.7□□□□□ -0.22
NEDD9-215ENST00000514660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.7□□□□□ -0.22
NEDD9-215ENST00000514660 U2AF1L4Q8WU68 220 aaKnown RBP13.7□□□□□ -0.22
NEDD9-215ENST00000514660 GDF15Q99988 308 aa13.7□□□□□ -0.22
NEDD9-215ENST00000514660 HTATIP2Q9BUP3 242 aa13.7□□□□□ -0.22
NEDD9-215ENST00000514660 UNC93B1Q9H1C4 597 aa13.7□□□□□ -0.22
NEDD9-215ENST00000514660 CPA4Q9UI42 421 aa13.7□□□□□ -0.22
NEDD9-215ENST00000514660 LEMD3Q9Y2U8 911 aa13.7□□□□□ -0.22
NEDD9-215ENST00000514660 RIPOR2Q9Y4F9 1068 aa13.7□□□□□ -0.22
NEDD9-215ENST00000514660 NR2E3Q9Y5X4 410 aa13.7□□□□□ -0.22
NEDD9-215ENST00000514660 IGKV5-2P06315 115 aa13.69□□□□□ -0.22
NEDD9-215ENST00000514660 GRK4P32298 578 aa13.69□□□□□ -0.22
NEDD9-215ENST00000514660 PSMC4P43686 418 aa13.69□□□□□ -0.22
NEDD9-215ENST00000514660 GTF2A2P52657 109 aa13.69□□□□□ -0.22
NEDD9-215ENST00000514660 ARHGEF6Q15052 776 aa13.69□□□□□ -0.22
NEDD9-215ENST00000514660 CDC5LQ99459 802 aaKnown RBP13.69□□□□□ -0.22
NEDD9-215ENST00000514660 RNF208Q9H0X6 261 aa13.69□□□□□ -0.22
NEDD9-215ENST00000514660 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
NEDD9-215ENST00000514660 LAS1LQ9Y4W2 734 aaKnown RBP13.69□□□□□ -0.22
NEDD9-215ENST00000514660 SNCAIPQ9Y6H5 919 aa13.69□□□□□ -0.22
NEDD9-215ENST00000514660 MGAMO43451 1857 aa13.69□□□□□ -0.22
NEDD9-215ENST00000514660 SPDYE5A6NIY4 337 aa13.68□□□□□ -0.22
NEDD9-215ENST00000514660 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
NEDD9-215ENST00000514660 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
NEDD9-215ENST00000514660 METTL22Q9BUU2 404 aaPredicted RBP13.68□□□□□ -0.22
NEDD9-215ENST00000514660 TMEM39BQ9GZU3 492 aa13.68□□□□□ -0.22
NEDD9-215ENST00000514660 TDRD3Q9H7E2 651 aaKnown RBP13.68□□□□□ -0.22
NEDD9-215ENST00000514660 ZNF70Q9UC06 446 aaPredicted RBP13.68□□□□□ -0.22
NEDD9-215ENST00000514660 IRF6O14896 467 aa13.67□□□□□ -0.22
NEDD9-215ENST00000514660 HOXB7P09629 217 aa13.67□□□□□ -0.22
NEDD9-215ENST00000514660 BCAMP50895 628 aa13.67□□□□□ -0.22
NEDD9-215ENST00000514660 PRMT2P55345 433 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms