RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 UBE2Q2LH0YL09 131 aa16.8■□□□□ 0.28
PFDN1-206ENST00000514611 RABL6Q3YEC7 729 aaPredicted RBP16.8■□□□□ 0.28
PFDN1-206ENST00000514611 APOBEC3FQ8IUX4 373 aaKnown RBP16.8■□□□□ 0.28
PFDN1-206ENST00000514611 ANKRD44Q8N8A2 993 aa16.8■□□□□ 0.28
PFDN1-206ENST00000514611 AOX1Q06278 1338 aa16.79■□□□□ 0.28
PFDN1-206ENST00000514611 MMP14P50281 582 aa16.79■□□□□ 0.28
PFDN1-206ENST00000514611 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
PFDN1-206ENST00000514611 CSRNP1Q96S65 589 aa16.79■□□□□ 0.28
PFDN1-206ENST00000514611 RNF186Q9NXI6 227 aa16.79■□□□□ 0.28
PFDN1-206ENST00000514611 SAGE1Q9NXZ1 904 aa16.79■□□□□ 0.28
PFDN1-206ENST00000514611 TRPA1O75762 1119 aa16.78■□□□□ 0.28
PFDN1-206ENST00000514611 GYG1P46976 350 aa16.78■□□□□ 0.28
PFDN1-206ENST00000514611 PRKG1Q13976 671 aa16.78■□□□□ 0.28
PFDN1-206ENST00000514611 DLGAP5Q15398 846 aa16.78■□□□□ 0.28
PFDN1-206ENST00000514611 CFAP100Q494V2 611 aa16.78■□□□□ 0.28
PFDN1-206ENST00000514611 LRRC24Q50LG9 513 aa16.78■□□□□ 0.28
PFDN1-206ENST00000514611 MCOLN1Q9GZU1 580 aa16.78■□□□□ 0.28
PFDN1-206ENST00000514611 FZD1Q9UP38 647 aa16.78■□□□□ 0.28
PFDN1-206ENST00000514611 RIPOR2Q9Y4F9 1068 aa16.78■□□□□ 0.28
PFDN1-206ENST00000514611 SSC5DA1L4H1 1573 aa16.77■□□□□ 0.28
PFDN1-206ENST00000514611 CLRN2A0PK11 232 aa16.77■□□□□ 0.28
PFDN1-206ENST00000514611 NF2P35240 595 aa16.77■□□□□ 0.28
PFDN1-206ENST00000514611 FKBP1AP62942 108 aaKnown RBP16.77■□□□□ 0.28
PFDN1-206ENST00000514611 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
PFDN1-206ENST00000514611 MTMR14Q8NCE2 650 aa16.77■□□□□ 0.28
PFDN1-206ENST00000514611 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.28
PFDN1-206ENST00000514611 COL1A1P02452 1464 aaPredicted RBP16.77■□□□□ 0.28
PFDN1-206ENST00000514611 SPDYE2BA6NHP3 402 aa16.76■□□□□ 0.27
PFDN1-206ENST00000514611 SPDYE6P0CI01 402 aa16.76■□□□□ 0.27
PFDN1-206ENST00000514611 MKRN3Q13064 507 aaKnown RBP16.76■□□□□ 0.27
PFDN1-206ENST00000514611 TDRD7Q8NHU6 1098 aaKnown RBP16.76■□□□□ 0.27
PFDN1-206ENST00000514611 FAM84BQ96KN1 310 aaPredicted RBP16.76■□□□□ 0.27
PFDN1-206ENST00000514611 DEFB129Q9H1M3 183 aa16.76■□□□□ 0.27
PFDN1-206ENST00000514611 SMC4Q9NTJ3 1288 aa16.76■□□□□ 0.27
PFDN1-206ENST00000514611 FAM205AQ6ZU69 1335 aa16.75■□□□□ 0.27
PFDN1-206ENST00000514611 MROH5Q6ZUA9 1318 aa16.75■□□□□ 0.27
PFDN1-206ENST00000514611 CCDC85CA6NKD9 419 aa16.75■□□□□ 0.27
PFDN1-206ENST00000514611 HIBADHP31937 336 aaKnown RBP16.75■□□□□ 0.27
PFDN1-206ENST00000514611 DGKZQ13574 1117 aa16.75■□□□□ 0.27
PFDN1-206ENST00000514611 ALDH1L2Q3SY69 923 aa16.75■□□□□ 0.27
PFDN1-206ENST00000514611 METTL24Q5JXM2 366 aa16.75■□□□□ 0.27
PFDN1-206ENST00000514611 MFSD14BQ5SR56 506 aa16.75■□□□□ 0.27
PFDN1-206ENST00000514611 PRMT6Q96LA8 375 aaPredicted RBP16.75■□□□□ 0.27
PFDN1-206ENST00000514611 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
PFDN1-206ENST00000514611 CASP8AP2Q9UKL3 1982 aa16.75■□□□□ 0.27
PFDN1-206ENST00000514611 RBM5P52756 815 aaKnown RBP eCLIP16.74■□□□□ 0.27
PFDN1-206ENST00000514611 PTPN12Q05209 780 aaKnown RBP16.74■□□□□ 0.27
PFDN1-206ENST00000514611 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
PFDN1-206ENST00000514611 VGLL2Q8N8G2 317 aa16.74■□□□□ 0.27
PFDN1-206ENST00000514611 VEZTQ9HBM0 779 aa16.74■□□□□ 0.27
PFDN1-206ENST00000514611 ANGEL1Q9UNK9 670 aaKnown RBP16.74■□□□□ 0.27
PFDN1-206ENST00000514611 IQSEC3Q9UPP2 1182 aaPredicted RBP16.74■□□□□ 0.27
PFDN1-206ENST00000514611 ARAP2Q8WZ64 1704 aa16.73■□□□□ 0.27
PFDN1-206ENST00000514611 MYO1BO43795 1136 aa16.73■□□□□ 0.27
PFDN1-206ENST00000514611 ARMC9Q7Z3E5 817 aa16.73■□□□□ 0.27
PFDN1-206ENST00000514611 TTF2Q9UNY4 1162 aaKnown RBP16.73■□□□□ 0.27
PFDN1-206ENST00000514611 GRIK5Q16478 980 aa16.72■□□□□ 0.27
PFDN1-206ENST00000514611 REM2Q8IYK8 340 aaPredicted RBP16.72■□□□□ 0.27
PFDN1-206ENST00000514611 ECM29Q5VYK3 1845 aa16.72■□□□□ 0.27
PFDN1-206ENST00000514611 PDE8BO95263 885 aa16.71■□□□□ 0.27
PFDN1-206ENST00000514611 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
PFDN1-206ENST00000514611 LDLRAD1Q5T700 205 aa16.71■□□□□ 0.27
PFDN1-206ENST00000514611 FBXO33Q7Z6M2 555 aa16.71■□□□□ 0.27
PFDN1-206ENST00000514611 VPS37DQ86XT2 251 aa16.71■□□□□ 0.27
PFDN1-206ENST00000514611 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.71■□□□□ 0.27
PFDN1-206ENST00000514611 PPP2R3BQ9Y5P8 575 aa16.71■□□□□ 0.27
PFDN1-206ENST00000514611 CCER2I3L3R5 266 aa16.7■□□□□ 0.26
PFDN1-206ENST00000514611 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
PFDN1-206ENST00000514611 NBPF12Q5TAG4 269 aaPredicted RBP16.7■□□□□ 0.26
PFDN1-206ENST00000514611 NOB1Q9ULX3 412 aaKnown RBP16.7■□□□□ 0.26
PFDN1-206ENST00000514611 AKAP11Q9UKA4 1901 aa16.7■□□□□ 0.26
PFDN1-206ENST00000514611 TBC1D8O95759 1140 aa16.69■□□□□ 0.26
PFDN1-206ENST00000514611 BCAMP50895 628 aa16.69■□□□□ 0.26
PFDN1-206ENST00000514611 RASA3Q14644 834 aa16.69■□□□□ 0.26
PFDN1-206ENST00000514611 MAP3K11Q16584 847 aa16.69■□□□□ 0.26
PFDN1-206ENST00000514611 SPDYE2Q495Y8 402 aa16.69■□□□□ 0.26
PFDN1-206ENST00000514611 CDAN1Q8IWY9 1227 aa16.69■□□□□ 0.26
PFDN1-206ENST00000514611 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
PFDN1-206ENST00000514611 TDRD3Q9H7E2 651 aaKnown RBP16.69■□□□□ 0.26
PFDN1-206ENST00000514611 SERPINA10Q9UK55 444 aa16.69■□□□□ 0.26
PFDN1-206ENST00000514611 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
PFDN1-206ENST00000514611 FGFR2P21802 821 aa16.68■□□□□ 0.26
PFDN1-206ENST00000514611 CRKP46108 304 aa16.68■□□□□ 0.26
PFDN1-206ENST00000514611 TM4SF4P48230 202 aa16.68■□□□□ 0.26
PFDN1-206ENST00000514611 PUM3Q15397 648 aaKnown RBP16.68■□□□□ 0.26
PFDN1-206ENST00000514611 CAVIN4Q5BKX8 364 aa16.68■□□□□ 0.26
PFDN1-206ENST00000514611 SPRYD7Q5W111 196 aa16.68■□□□□ 0.26
PFDN1-206ENST00000514611 DZIP1LQ8IYY4 767 aaKnown RBP16.68■□□□□ 0.26
PFDN1-206ENST00000514611 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
PFDN1-206ENST00000514611 EYA2O00167 538 aa16.67■□□□□ 0.26
PFDN1-206ENST00000514611 PPP1R12BO60237 982 aaPredicted RBP16.67■□□□□ 0.26
PFDN1-206ENST00000514611 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
PFDN1-206ENST00000514611 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
PFDN1-206ENST00000514611 SREBF2Q12772 1141 aa16.67■□□□□ 0.26
PFDN1-206ENST00000514611 TCP10L2B9ZVM9 353 aa16.66■□□□□ 0.26
PFDN1-206ENST00000514611 IFIT1P09914 478 aaKnown RBP16.66■□□□□ 0.26
PFDN1-206ENST00000514611 SUPT20HL1Q3ZLR7 823 aa16.66■□□□□ 0.26
PFDN1-206ENST00000514611 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
PFDN1-206ENST00000514611 ZNF296Q8WUU4 475 aaPredicted RBP16.66■□□□□ 0.26
PFDN1-206ENST00000514611 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms