RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 UNC93B1Q9H1C4 597 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 DEFB129Q9H1M3 183 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 TRMT112Q9UI30 125 aaKnown RBP4.36□□□□□ -1.71
CHD1-211ENST00000514344 ALPK3Q96L96 1907 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 CEMIPQ8WUJ3 1361 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 DDX60Q8IY21 1712 aaKnown RBP4.36□□□□□ -1.71
CHD1-211ENST00000514344 PARP10Q53GL7 1025 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 PODNQ7Z5L7 613 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 GAS2L2Q8NHY3 880 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 OPTNQ96CV9 577 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 DEFB118Q96PH6 123 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 GMLQ99445 158 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 CDX2Q99626 313 aaPredicted RBP4.36□□□□□ -1.71
CHD1-211ENST00000514344 THUMPD2Q9BTF0 503 aaKnown RBP4.36□□□□□ -1.71
CHD1-211ENST00000514344 ELP3Q9H9T3 547 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 COL4A1P02462 1669 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 LRRC37AA6NMS7 1700 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 CCL15-CCL14A0A0B4J2E2 113 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 SGPL1O95470 568 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 CTGFP29279 349 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 PSMC4P43686 418 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 MDM2Q00987 491 aaPredicted RBP4.35□□□□□ -1.71
CHD1-211ENST00000514344 CNGB1Q14028 1251 aaPredicted RBP4.35□□□□□ -1.71
CHD1-211ENST00000514344 CCL15Q16663 113 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 SLC10A5Q5PT55 438 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 ZNF697Q5TEC3 545 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 BRI3BPQ8WY22 251 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 MYLIPQ8WY64 445 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 PANK3Q9H999 370 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 FOXD4L1Q9NU39 408 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 ZNF646O15015 1829 aaPredicted RBP4.35□□□□□ -1.71
CHD1-211ENST00000514344 USP17L3A6NCW0 530 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 USP17L4A6NCW7 530 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 DIAPH1O60610 1272 aaKnown RBP4.35□□□□□ -1.71
CHD1-211ENST00000514344 FMNL1O95466 1100 aaPredicted RBP4.35□□□□□ -1.71
CHD1-211ENST00000514344 UBXN2AP68543 259 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 USP17L1Q7RTZ2 530 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 KIAA0825Q8IV33 1275 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 MS4A4AQ96JQ5 239 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 TRIM47Q96LD4 638 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 SRRDQ9UH36 339 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 SSC5DA1L4H1 1573 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 ANKRD36CQ5JPF3 1778 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 TLR2O60603 784 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 ANXA1P04083 346 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 OSBPP22059 807 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 TJAP1Q5JTD0 557 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 NBPF12Q5TAG4 269 aaPredicted RBP4.35□□□□□ -1.71
CHD1-211ENST00000514344 TMC4Q7Z404 712 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 APOBEC3FQ8IUX4 373 aaKnown RBP4.35□□□□□ -1.71
CHD1-211ENST00000514344 PHACTR3Q96KR7 559 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 CPA4Q9UI42 421 aa4.35□□□□□ -1.71
CHD1-211ENST00000514344 MYPNQ86TC9 1320 aa4.34□□□□□ -1.71
CHD1-211ENST00000514344 SH3TC1Q8TE82 1336 aa4.34□□□□□ -1.71
CHD1-211ENST00000514344 CLRN2A0PK11 232 aa4.34□□□□□ -1.71
CHD1-211ENST00000514344 ELNP15502 786 aa4.34□□□□□ -1.71
CHD1-211ENST00000514344 IREB2P48200 963 aaKnown RBP4.34□□□□□ -1.71
CHD1-211ENST00000514344 PRKCZQ05513 592 aa4.34□□□□□ -1.71
CHD1-211ENST00000514344 AIMP1Q12904 312 aaKnown RBP4.34□□□□□ -1.71
CHD1-211ENST00000514344 ALYREFQ86V81 257 aaKnown RBP4.34□□□□□ -1.71
CHD1-211ENST00000514344 ANKRD13AQ8IZ07 590 aa4.34□□□□□ -1.71
CHD1-211ENST00000514344 RTF1Q92541 710 aaKnown RBP4.34□□□□□ -1.71
CHD1-211ENST00000514344 GGA1Q9UJY5 639 aa4.34□□□□□ -1.71
CHD1-211ENST00000514344 TAOK2Q9UL54 1235 aa4.34□□□□□ -1.71
CHD1-211ENST00000514344 TESPA1A2RU30 521 aaPredicted RBP4.34□□□□□ -1.72
CHD1-211ENST00000514344 WDHD1O75717 1129 aaPredicted RBP4.34□□□□□ -1.72
CHD1-211ENST00000514344 FOSL2P15408 326 aa4.34□□□□□ -1.72
CHD1-211ENST00000514344 MAP3K11Q16584 847 aa4.34□□□□□ -1.72
CHD1-211ENST00000514344 NECAB2Q7Z6G3 386 aa4.34□□□□□ -1.72
CHD1-211ENST00000514344 NLRP10Q86W26 655 aa4.34□□□□□ -1.72
CHD1-211ENST00000514344 FAM89AQ96GI7 184 aa4.34□□□□□ -1.72
CHD1-211ENST00000514344 VEZTQ9HBM0 779 aa4.34□□□□□ -1.72
CHD1-211ENST00000514344 PCDHAC2Q9Y5I4 1007 aa4.34□□□□□ -1.72
CHD1-211ENST00000514344 GALR2O43603 387 aaPredicted RBP4.33□□□□□ -1.72
CHD1-211ENST00000514344 USP2O75604 605 aaPredicted RBP4.33□□□□□ -1.72
CHD1-211ENST00000514344 PRR29P0C7W0 189 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 RPS8P62241 208 aaKnown RBP4.33□□□□□ -1.72
CHD1-211ENST00000514344 PPM1EQ8WY54 764 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 NECTIN2Q92692 538 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 FARP1Q9Y4F1 1045 aaPredicted RBP4.33□□□□□ -1.72
CHD1-211ENST00000514344 CACNA1GO43497 2377 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 GNRH1P01148 92 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 PRKAR2BP31323 418 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 PRMT2P55345 433 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 USP38Q8NB14 1042 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 CCDC85AQ96PX6 553 aaPredicted RBP4.33□□□□□ -1.72
CHD1-211ENST00000514344 SEC31BQ9NQW1 1179 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 LAMB1P07942 1786 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 MYO15AQ9UKN7 3530 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 MYO9BQ13459 2157 aa4.33□□□□□ -1.72
CHD1-211ENST00000514344 BTBD19C9JJ37 291 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 INHAP05111 366 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 EIF2S2P20042 333 aaKnown RBP4.32□□□□□ -1.72
CHD1-211ENST00000514344 HOXD10P28358 340 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 GTF2A2P52657 109 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 SUPT20HL1Q3ZLR7 823 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 DACT2Q5SW24 774 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 FAM109BQ6ICB4 259 aaPredicted RBP4.32□□□□□ -1.72
CHD1-211ENST00000514344 GABRQQ9UN88 632 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 HCN4Q9Y3Q4 1203 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms