RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	TMC1	Q8TDI8	760 aa		5.77	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	TRAK1	Q9UPV9	953 aa		5.77	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	LOC100996750	A0A140TA64	210 aa		5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	MEGF11	A6BM72	1044 aa		5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267		A6NHS1	94 aa		5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	SART1	O43290	800 aa	Known RBP	5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	PTPN12	Q05209	780 aa	Known RBP	5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	PRSS36	Q5K4E3	855 aa		5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	ZMYM1	Q5SVZ6	1142 aa		5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	KIAA0319	Q5VV43	1072 aa		5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	KRTAP4-6	Q9BYQ5	205 aa		5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	DCTN4	Q9UJW0	460 aa		5.76	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	CARNS1	A5YM72	827 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	SOWAHD	A6NJG2	315 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	FDX2	Q6P4F2	183 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	FOXD4L3	Q6VB84	417 aa	Predicted RBP	5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	CCNJL	Q8IV13	435 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	GALNT11	Q8NCW6	608 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	ASAP3	Q8TDY4	903 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	MEGF10	Q96KG7	1140 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	CLEC4M	Q9H2X3	399 aa	Predicted RBP	5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	LIN7B	Q9HAP6	207 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	CYP4F12	Q9HCS2	524 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	SH2B1	Q9NRF2	756 aa	Predicted RBP	5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	PPP4R2	Q9NY27	417 aa		5.75	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	CYP11A1	P05108	521 aa		5.74	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	TXNDC11	Q6PKC3	985 aa		5.74	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	GIMAP7	Q8NHV1	300 aa		5.74	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	SLC7A3	Q8WY07	619 aa		5.74	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	RUSC1	Q9BVN2	902 aa		5.74	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	YIPF2	Q9BWQ6	316 aa		5.74	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	CARD10	Q9BWT7	1032 aa		5.74	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	BIN2	Q9UBW5	565 aa	Predicted RBP	5.74	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	RAX	Q9Y2V3	346 aa		5.74	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	SCO2	A0A1W2PP80	73 aa		5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	XRCC5	P13010	732 aa	Known RBP	5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	PEAR1	Q5VY43	1037 aa	Predicted RBP	5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	NUTM2G	Q5VZR2	741 aa		5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	PRPF40B	Q6NWY9	871 aa	Known RBP	5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	VN1R5	Q7Z5H4	357 aa		5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	UTP4	Q969X6	686 aa	Known RBP	5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	MYRFL	Q96LU7	910 aa		5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	SUGCT	Q9HAC7	445 aa		5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	STOML1	Q9UBI4	398 aa		5.73	□□□□□ -1.49
CALCOCO2-223	ENST00000514267		A0A096LPE4	126 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267		A0A1W2PP55	124 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267		A0A1W2PPZ6	126 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	GAS2	O43903	313 aa	Known RBP	5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	ESRRA	P11474	423 aa	Predicted RBP	5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	ERCC3	P19447	782 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	FST	P19883	344 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	CDC25B	P30305	580 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	FGD1	P98174	961 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	CPSF6	Q16630	551 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	KIAA1211	Q6ZU35	1233 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	KLHDC7B	Q96G42	594 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	FAM46A	Q96IP4	442 aa	Known RBP	5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	EHD4	Q9H223	541 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	NLRP2	Q9NX02	1062 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	RNF112	Q9ULX5	631 aa		5.72	□□□□□ -1.49
CALCOCO2-223	ENST00000514267	EIF1AY	O14602	144 aa	Known RBP	5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	TM4SF5	O14894	197 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ACPP	P15309	386 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ITPKA	P23677	461 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	NLRP12	P59046	1061 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	PCDH1	Q08174	1060 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	AP3B2	Q13367	1082 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	LRP8	Q14114	963 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ECM1	Q16610	540 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	CLEC10A	Q8IUN9	316 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267		Q8N3U1	123 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	SMG8	Q8ND04	991 aa	Known RBP	5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	UBASH3B	Q8TF42	649 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	CSRNP1	Q96S65	589 aa		5.71	□□□□□ -1.5
CALCOCO2-223	ENST00000514267		E9PSI1	815 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ADAM11	O75078	769 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ALX3	O95076	343 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	WISP1	O95388	367 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	B3GALT4	O96024	378 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	GRIK1	P39086	918 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	RBM25	P49756	843 aa	Known RBP	5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	GSTM4	Q03013	218 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	EXOSC6	Q5RKV6	272 aa	Known RBP	5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ARTN	Q5T4W7	220 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	AGGF1	Q8N302	714 aa	eCLIP	5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	FBF1	Q8TES7	1133 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	CCDC74A	Q96AQ1	378 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	HHIP	Q96QV1	700 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	TCF12	Q99081	682 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	CORO1B	Q9BR76	489 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	USP26	Q9BXU7	913 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	SRCIN1	Q9C0H9	1055 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	SYNGAP1	Q96PV0	1343 aa		5.7	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	SOX1	O00570	391 aa	Predicted RBP	5.69	□□□□□ -1.5

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