RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 RSBN1LQ6PCB5 846 aaPredicted RBP10.16□□□□□ -0.78
NEDD4-210ENST00000513957 LPIN2Q92539 896 aa10.16□□□□□ -0.78
NEDD4-210ENST00000513957 PUS3Q9BZE2 481 aaKnown RBP10.16□□□□□ -0.78
NEDD4-210ENST00000513957 CD209Q9NNX6 404 aa10.16□□□□□ -0.78
NEDD4-210ENST00000513957 H7C1D1 291 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 IFIT1P09914 478 aaKnown RBP10.15□□□□□ -0.78
NEDD4-210ENST00000513957 SLC5A1P13866 664 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 FGFR2P21802 821 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 GMPSP49915 693 aaPredicted RBP10.15□□□□□ -0.78
NEDD4-210ENST00000513957 LRRC24Q50LG9 513 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 CHADLQ6NUI6 762 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 ATG9AQ7Z3C6 839 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 PANK1Q8TE04 598 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 SSH3Q8TE77 659 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 YTHDC1Q96MU7 727 aaKnown RBP10.15□□□□□ -0.78
NEDD4-210ENST00000513957 GPR101Q96P66 508 aaPredicted RBP10.15□□□□□ -0.78
NEDD4-210ENST00000513957 PLSCR2Q9NRY7 297 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 CEP126Q9P2H0 1117 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 AKAP2Q9Y2D5 859 aa10.15□□□□□ -0.78
NEDD4-210ENST00000513957 FAM205AQ6ZU69 1335 aa10.14□□□□□ -0.79
NEDD4-210ENST00000513957 PLIN1O60240 522 aa10.14□□□□□ -0.79
NEDD4-210ENST00000513957 CHRM1P11229 460 aaPredicted RBP10.14□□□□□ -0.79
NEDD4-210ENST00000513957 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
NEDD4-210ENST00000513957 DACT2Q5SW24 774 aa10.14□□□□□ -0.79
NEDD4-210ENST00000513957 TXNRD3Q86VQ6 643 aa10.14□□□□□ -0.79
NEDD4-210ENST00000513957 VPS37DQ86XT2 251 aa10.14□□□□□ -0.79
NEDD4-210ENST00000513957 RPAP2Q8IXW5 612 aaPredicted RBP10.14□□□□□ -0.79
NEDD4-210ENST00000513957 HELBQ8NG08 1087 aaPredicted RBP10.14□□□□□ -0.79
NEDD4-210ENST00000513957 KLHDC4Q8TBB5 520 aa10.14□□□□□ -0.79
NEDD4-210ENST00000513957 PNMA6EA0A0J9YXQ4 647 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 SEMA3EO15041 775 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 HMMRO75330 724 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 SASH1O94885 1247 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 HSPA6P17066 643 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 KLRK1P26718 216 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 HIBADHP31937 336 aaKnown RBP10.13□□□□□ -0.79
NEDD4-210ENST00000513957 EPS15P42566 896 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 NUBP1P53384 320 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 ZNF280AP59817 542 aaPredicted RBP10.13□□□□□ -0.79
NEDD4-210ENST00000513957 ATP2B3Q16720 1220 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 HSP90AB4PQ58FF6 505 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 TTLL5Q6EMB2 1281 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 FBXO33Q7Z6M2 555 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 MICALL2Q8IY33 904 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 OGFOD1Q8N543 542 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 TDRD7Q8NHU6 1098 aaKnown RBP10.13□□□□□ -0.79
NEDD4-210ENST00000513957 TBC1D22AQ8WUA7 517 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 FAM84BQ96KN1 310 aaPredicted RBP10.13□□□□□ -0.79
NEDD4-210ENST00000513957 GMLQ99445 158 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 SIL1Q9H173 461 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 CNOT7Q9UIV1 285 aaKnown RBP10.13□□□□□ -0.79
NEDD4-210ENST00000513957 SUGT1Q9Y2Z0 365 aa10.13□□□□□ -0.79
NEDD4-210ENST00000513957 POLR2AP24928 1970 aaKnown RBP10.13□□□□□ -0.79
NEDD4-210ENST00000513957 PDS5AQ29RF7 1337 aaKnown RBP10.12□□□□□ -0.79
NEDD4-210ENST00000513957 USP17L8P0C7I0 530 aa10.12□□□□□ -0.79
NEDD4-210ENST00000513957 APLP1P51693 650 aa10.12□□□□□ -0.79
NEDD4-210ENST00000513957 RRP1P56182 461 aaKnown RBP10.12□□□□□ -0.79
NEDD4-210ENST00000513957 G3BP1Q13283 466 aaKnown RBP eCLIP10.12□□□□□ -0.79
NEDD4-210ENST00000513957 AAMPQ13685 434 aa10.12□□□□□ -0.79
NEDD4-210ENST00000513957 EAPPQ56P03 285 aaPredicted RBP10.12□□□□□ -0.79
NEDD4-210ENST00000513957 CEP85Q6P2H3 762 aa10.12□□□□□ -0.79
NEDD4-210ENST00000513957 ERC1Q8IUD2 1116 aa10.12□□□□□ -0.79
NEDD4-210ENST00000513957 GPR108Q9NPR9 543 aa10.12□□□□□ -0.79
NEDD4-210ENST00000513957 GNL3LQ9NVN8 582 aaKnown RBP10.12□□□□□ -0.79
NEDD4-210ENST00000513957 PGAP2Q9UHJ9 254 aa10.12□□□□□ -0.79
NEDD4-210ENST00000513957 HDAC9Q9UKV0 1011 aa10.12□□□□□ -0.79
NEDD4-210ENST00000513957 PA2G4Q9UQ80 394 aaKnown RBP10.12□□□□□ -0.79
NEDD4-210ENST00000513957 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
NEDD4-210ENST00000513957 NOP58Q9Y2X3 529 aaKnown RBP10.12□□□□□ -0.79
NEDD4-210ENST00000513957 PITPNM2Q9BZ72 1349 aa10.11□□□□□ -0.79
NEDD4-210ENST00000513957 WTIPA6NIX2 430 aaPredicted RBP10.11□□□□□ -0.79
NEDD4-210ENST00000513957 SNAP23O00161 211 aa10.11□□□□□ -0.79
NEDD4-210ENST00000513957 GYG1P46976 350 aa10.11□□□□□ -0.79
NEDD4-210ENST00000513957 GTF2IP78347 998 aa10.11□□□□□ -0.79
NEDD4-210ENST00000513957 KIF4BQ2VIQ3 1234 aa10.11□□□□□ -0.79
NEDD4-210ENST00000513957 KCNQ5Q9NR82 932 aa10.11□□□□□ -0.79
NEDD4-210ENST00000513957 MAST2Q6P0Q8 1798 aa10.11□□□□□ -0.79
NEDD4-210ENST00000513957 COL1A1P02452 1464 aaPredicted RBP10.1□□□□□ -0.79
NEDD4-210ENST00000513957 MAST3O60307 1309 aa10.1□□□□□ -0.79
NEDD4-210ENST00000513957 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.1□□□□□ -0.79
NEDD4-210ENST00000513957 IGSF3O75054 1194 aa10.1□□□□□ -0.79
NEDD4-210ENST00000513957 ZGPATQ8N5A5 531 aaKnown RBP10.1□□□□□ -0.79
NEDD4-210ENST00000513957 MTMR14Q8NCE2 650 aa10.1□□□□□ -0.79
NEDD4-210ENST00000513957 WDR66Q8TBY9 1149 aa10.1□□□□□ -0.79
NEDD4-210ENST00000513957 ZFP91Q96JP5 570 aaPredicted RBP10.1□□□□□ -0.79
NEDD4-210ENST00000513957 C1orf115Q9H7X2 142 aa10.1□□□□□ -0.79
NEDD4-210ENST00000513957 MYOZ2Q9NPC6 264 aa10.1□□□□□ -0.79
NEDD4-210ENST00000513957 CLEC11AQ9Y240 323 aa10.1□□□□□ -0.79
NEDD4-210ENST00000513957 PASKQ96RG2 1323 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 SALL1Q9NSC2 1324 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 AKAP11Q9UKA4 1901 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 A0A1B0GUL7 405 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 FRAT2O75474 233 aaPredicted RBP10.09□□□□□ -0.79
NEDD4-210ENST00000513957 SURF6O75683 361 aaKnown RBP10.09□□□□□ -0.79
NEDD4-210ENST00000513957 POTEIP0CG38 1075 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 POTEJP0CG39 1038 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 HDLBPQ00341 1268 aaKnown RBP10.09□□□□□ -0.79
NEDD4-210ENST00000513957 OS9Q13438 667 aaPredicted RBP10.09□□□□□ -0.79
NEDD4-210ENST00000513957 MFSD14BQ5SR56 506 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms