RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 F6X3S4 739 aa12.47□□□□□ -0.41
CCL28-203ENST00000513525 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
CCL28-203ENST00000513525 RSBN1LQ6PCB5 846 aaPredicted RBP12.47□□□□□ -0.41
CCL28-203ENST00000513525 HHIPL1Q96JK4 782 aa12.47□□□□□ -0.41
CCL28-203ENST00000513525 LEMD3Q9Y2U8 911 aa12.47□□□□□ -0.41
CCL28-203ENST00000513525 FOXN1O15353 648 aa12.46□□□□□ -0.42
CCL28-203ENST00000513525 CELF2O95319 508 aaKnown RBP12.46□□□□□ -0.42
CCL28-203ENST00000513525 EGFRP00533 1210 aa12.46□□□□□ -0.42
CCL28-203ENST00000513525 HOXB3P14651 431 aaPredicted RBP12.46□□□□□ -0.42
CCL28-203ENST00000513525 ECE1P42892 770 aa12.46□□□□□ -0.42
CCL28-203ENST00000513525 ZNF280AP59817 542 aaPredicted RBP12.46□□□□□ -0.42
CCL28-203ENST00000513525 TBC1D10BQ4KMP7 808 aaPredicted RBP12.46□□□□□ -0.42
CCL28-203ENST00000513525 SAPCD2Q86UD0 394 aa12.46□□□□□ -0.42
CCL28-203ENST00000513525 GMLQ99445 158 aa12.46□□□□□ -0.42
CCL28-203ENST00000513525 ANKRD2Q9GZV1 360 aa12.46□□□□□ -0.42
CCL28-203ENST00000513525 WBP1LQ9NX94 342 aa12.46□□□□□ -0.42
CCL28-203ENST00000513525 FOXO4P98177 505 aa12.45□□□□□ -0.42
CCL28-203ENST00000513525 KIF4BQ2VIQ3 1234 aa12.45□□□□□ -0.42
CCL28-203ENST00000513525 CAPNS2Q96L46 248 aa12.45□□□□□ -0.42
CCL28-203ENST00000513525 MPHOSPH8Q99549 860 aa12.45□□□□□ -0.42
CCL28-203ENST00000513525 MYH13Q9UKX3 1938 aa12.45□□□□□ -0.42
CCL28-203ENST00000513525 ANKRD18BA2A2Z9 1011 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 USP17L3A6NCW0 530 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 USP17L4A6NCW7 530 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 WTIPA6NIX2 430 aaPredicted RBP12.44□□□□□ -0.42
CCL28-203ENST00000513525 GRM8O00222 908 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 ALDH1L1O75891 902 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 MAP2K1Q02750 393 aaPredicted RBP12.44□□□□□ -0.42
CCL28-203ENST00000513525 USP17L1Q7RTZ2 530 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 AIDAQ96BJ3 306 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 DCPSQ96C86 337 aaKnown RBP12.44□□□□□ -0.42
CCL28-203ENST00000513525 COA1Q9GZY4 146 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 ZNF804BA4D1E1 1349 aa12.44□□□□□ -0.42
CCL28-203ENST00000513525 E9PSI1 815 aa12.43□□□□□ -0.42
CCL28-203ENST00000513525 CTCFP49711 727 aaPredicted RBP12.43□□□□□ -0.42
CCL28-203ENST00000513525 CYP4F22Q6NT55 531 aa12.43□□□□□ -0.42
CCL28-203ENST00000513525 KRT26Q7Z3Y9 468 aa12.43□□□□□ -0.42
CCL28-203ENST00000513525 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
CCL28-203ENST00000513525 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
CCL28-203ENST00000513525 RNF166Q96A37 237 aaPredicted RBP12.43□□□□□ -0.42
CCL28-203ENST00000513525 PPP4R2Q9NY27 417 aa12.43□□□□□ -0.42
CCL28-203ENST00000513525 PAPPA2Q9BXP8 1791 aa12.43□□□□□ -0.42
CCL28-203ENST00000513525 MYO3BQ8WXR4 1341 aa12.43□□□□□ -0.42
CCL28-203ENST00000513525 USP17L8P0C7I0 530 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 MAP2K2P36507 400 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 CHRNDQ07001 517 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 IFIT5Q13325 482 aaKnown RBP12.42□□□□□ -0.42
CCL28-203ENST00000513525 RBM26Q5T8P6 1007 aaKnown RBP12.42□□□□□ -0.42
CCL28-203ENST00000513525 STRIP1Q5VSL9 837 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 TXNRD3Q86VQ6 643 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 SRCIN1Q9C0H9 1055 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 GGA3Q9NZ52 723 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 PITPNM2Q9BZ72 1349 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 LAMB1P07942 1786 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 CASP8AP2Q9UKL3 1982 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 MMP14P50281 582 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 DACT2Q5SW24 774 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 C15orf52Q6ZUT6 534 aaKnown RBP12.42□□□□□ -0.42
CCL28-203ENST00000513525 PAXIP1Q6ZW49 1069 aaPredicted RBP12.42□□□□□ -0.42
CCL28-203ENST00000513525 ZNF408Q9H9D4 720 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 MYOZ2Q9NPC6 264 aa12.42□□□□□ -0.42
CCL28-203ENST00000513525 UTYO14607 1347 aa12.41□□□□□ -0.42
CCL28-203ENST00000513525 IRS2Q9Y4H2 1338 aa12.41□□□□□ -0.42
CCL28-203ENST00000513525 SLFN5Q08AF3 891 aa12.41□□□□□ -0.42
CCL28-203ENST00000513525 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
CCL28-203ENST00000513525 SLC4A10Q6U841 1118 aa12.41□□□□□ -0.42
CCL28-203ENST00000513525 LMBR1LQ6UX01 489 aa12.41□□□□□ -0.42
CCL28-203ENST00000513525 SULF1Q8IWU6 871 aa12.41□□□□□ -0.42
CCL28-203ENST00000513525 MRPL50Q8N5N7 158 aaKnown RBP12.41□□□□□ -0.42
CCL28-203ENST00000513525 C9orf78Q9NZ63 289 aaPredicted RBP12.41□□□□□ -0.42
CCL28-203ENST00000513525 PTPRCP08575 1304 aa12.41□□□□□ -0.42
CCL28-203ENST00000513525 ADM5C9JUS6 153 aa12.4□□□□□ -0.42
CCL28-203ENST00000513525 HSPA8P11142 646 aaKnown RBP12.4□□□□□ -0.42
CCL28-203ENST00000513525 KLRK1P26718 216 aa12.4□□□□□ -0.42
CCL28-203ENST00000513525 SCARF1Q14162 830 aa12.4□□□□□ -0.42
CCL28-203ENST00000513525 CCDC57Q2TAC2 916 aa12.4□□□□□ -0.42
CCL28-203ENST00000513525 GBA2Q9HCG7 927 aaPredicted RBP12.4□□□□□ -0.42
CCL28-203ENST00000513525 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
CCL28-203ENST00000513525 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
CCL28-203ENST00000513525 ASTN2O75129 1339 aaPredicted RBP12.4□□□□□ -0.42
CCL28-203ENST00000513525 KCNJ4P48050 445 aa12.39□□□□□ -0.43
CCL28-203ENST00000513525 HUNKP57058 714 aa12.39□□□□□ -0.43
CCL28-203ENST00000513525 ANGEL2Q5VTE6 544 aaKnown RBP12.39□□□□□ -0.43
CCL28-203ENST00000513525 DLK2Q6UY11 383 aa12.39□□□□□ -0.43
CCL28-203ENST00000513525 AOC2O75106 756 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 TAF5LO75529 589 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 LBX1P52954 281 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
CCL28-203ENST00000513525 IRX6P78412 446 aaPredicted RBP12.38□□□□□ -0.43
CCL28-203ENST00000513525 GRM1Q13255 1194 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 TTLL5Q6EMB2 1281 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 LDHAL6AQ6ZMR3 332 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 TRMT2AQ8IZ69 625 aaKnown RBP12.38□□□□□ -0.43
CCL28-203ENST00000513525 OGFOD1Q8N543 542 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 KAZALD1Q96I82 304 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 SUCLG2Q96I99 432 aa12.38□□□□□ -0.43
CCL28-203ENST00000513525 CD209Q9NNX6 404 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms