RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 TSNAXIP1Q2TAA8 658 aa3.88□□□□□ -1.79
RNF4-219ENST00000513450 RPS26P11Q5JNZ5 115 aaPredicted RBP3.88□□□□□ -1.79
RNF4-219ENST00000513450 TMEM87AQ8NBN3 555 aa3.88□□□□□ -1.79
RNF4-219ENST00000513450 C3orf58Q8NDZ4 430 aa3.88□□□□□ -1.79
RNF4-219ENST00000513450 ASAP3Q8TDY4 903 aa3.88□□□□□ -1.79
RNF4-219ENST00000513450 WHAMMQ8TF30 809 aa3.88□□□□□ -1.79
RNF4-219ENST00000513450 PSMG3-AS1Q96PY0 264 aa3.88□□□□□ -1.79
RNF4-219ENST00000513450 METTL5Q9NRN9 209 aaKnown RBP3.88□□□□□ -1.79
RNF4-219ENST00000513450 SOX13Q9UN79 622 aa3.88□□□□□ -1.79
RNF4-219ENST00000513450 TRIM33Q9UPN9 1127 aa3.88□□□□□ -1.79
RNF4-219ENST00000513450 USP31Q70CQ4 1352 aa3.88□□□□□ -1.79
RNF4-219ENST00000513450 METTL12A8MUP2 240 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 PIK3R2O00459 728 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 SCAMP3O14828 347 aaKnown RBP3.87□□□□□ -1.79
RNF4-219ENST00000513450 EIF4EBP3O60516 100 aaPredicted RBP3.87□□□□□ -1.79
RNF4-219ENST00000513450 ARHGEF15O94989 841 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 DGKGP49619 791 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 TAF1CQ15572 869 aaPredicted RBP3.87□□□□□ -1.79
RNF4-219ENST00000513450 SPRED3Q2MJR0 410 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 LDLRAD1Q5T700 205 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 MSL1Q68DK7 614 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 GDF6Q6KF10 455 aaPredicted RBP3.87□□□□□ -1.79
RNF4-219ENST00000513450 WFDC8Q8IUA0 241 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 NEDD1Q8NHV4 660 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 WNT8BQ93098 351 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 LACRTQ9GZZ8 138 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 CLEC4MQ9H2X3 399 aaPredicted RBP3.87□□□□□ -1.79
RNF4-219ENST00000513450 ZNF576Q9H609 170 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 SRA1Q9HD15 236 aaKnown RBP3.87□□□□□ -1.79
RNF4-219ENST00000513450 AKAP2Q9Y2D5 859 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 PPME1Q9Y570 386 aa3.87□□□□□ -1.79
RNF4-219ENST00000513450 H3BRJ5 948 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 MSTNO14793 375 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 B3GALT4O96024 378 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 NID1P14543 1247 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 TCF3P15923 654 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 PIP4K2BP78356 416 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 ADAMTSL4Q6UY14 1074 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 ILDR2Q71H61 639 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 SV2BQ7L1I2 683 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 VN1R5Q7Z5H4 357 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 MAP4K3Q8IVH8 894 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 DTWD1Q8N5C7 304 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 IL22RA1Q8N6P7 574 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 DDX54Q8TDD1 881 aaKnown RBP3.86□□□□□ -1.79
RNF4-219ENST00000513450 DCAF11Q8TEB1 546 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 SCARF2Q96GP6 870 aaPredicted RBP3.86□□□□□ -1.79
RNF4-219ENST00000513450 NOC4LQ9BVI4 516 aaKnown RBP3.86□□□□□ -1.79
RNF4-219ENST00000513450 CEP44Q9C0F1 390 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 SOX17Q9H6I2 414 aaPredicted RBP3.86□□□□□ -1.79
RNF4-219ENST00000513450 IGSF5Q9NSI5 407 aa3.86□□□□□ -1.79
RNF4-219ENST00000513450 TTF2Q9UNY4 1162 aaKnown RBP3.86□□□□□ -1.79
RNF4-219ENST00000513450 ESRRAP11474 423 aaPredicted RBP3.85□□□□□ -1.79
RNF4-219ENST00000513450 RLBP1P12271 317 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 HOXB4P17483 251 aaPredicted RBP3.85□□□□□ -1.79
RNF4-219ENST00000513450 EPHA1P21709 976 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 RANGAP1P46060 587 aaPredicted RBP3.85□□□□□ -1.79
RNF4-219ENST00000513450 BAG6P46379 1132 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 ARL4DP49703 201 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 FANCCQ00597 558 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 PPP2R3AQ06190 1150 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 PCDH1Q08174 1060 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 COL9A3Q14050 684 aaPredicted RBP3.85□□□□□ -1.79
RNF4-219ENST00000513450 IKBKEQ14164 716 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 MEI1Q5TIA1 1274 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 FAM117BQ6P1L5 589 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 C8orf86Q6ZUL3 223 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 RNF34Q969K3 372 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 NECAB3Q96P71 396 aaPredicted RBP3.85□□□□□ -1.79
RNF4-219ENST00000513450 RRAGCQ9HB90 399 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 OSGEPQ9NPF4 335 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 SEC31BQ9NQW1 1179 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 SH2B1Q9NRF2 756 aaPredicted RBP3.85□□□□□ -1.79
RNF4-219ENST00000513450 MKL2Q9ULH7 1088 aa3.85□□□□□ -1.79
RNF4-219ENST00000513450 SPDYE3A6NKU9 549 aa3.84□□□□□ -1.79
RNF4-219ENST00000513450 GNB5O14775 395 aa3.84□□□□□ -1.79
RNF4-219ENST00000513450 ZNF76P36508 570 aa3.84□□□□□ -1.79
RNF4-219ENST00000513450 FAAP100Q0VG06 881 aa3.84□□□□□ -1.79
RNF4-219ENST00000513450 CCDC85BQ15834 202 aaPredicted RBP3.84□□□□□ -1.79
RNF4-219ENST00000513450 ZNF423Q2M1K9 1284 aa3.84□□□□□ -1.79
RNF4-219ENST00000513450 LINC00114Q6XXX2 140 aa3.84□□□□□ -1.79
RNF4-219ENST00000513450 HS2ST1Q7LGA3 356 aa3.84□□□□□ -1.79
RNF4-219ENST00000513450 BEND7Q8N7W2 519 aaPredicted RBP3.84□□□□□ -1.79
RNF4-219ENST00000513450 KLHL23Q8NBE8 558 aa3.84□□□□□ -1.79
RNF4-219ENST00000513450 TMEM39AQ9NV64 488 aa3.84□□□□□ -1.79
RNF4-219ENST00000513450 GPN3Q9UHW5 284 aaPredicted RBP3.84□□□□□ -1.79
RNF4-219ENST00000513450 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
RNF4-219ENST00000513450 LINC01387J3KSC0 135 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 SOX1O00570 391 aaPredicted RBP3.83□□□□□ -1.8
RNF4-219ENST00000513450 ENC1O14682 589 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 FSCN2O14926 492 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 RAC1P63000 192 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 SNRPNP63162 240 aaKnown RBP3.83□□□□□ -1.8
RNF4-219ENST00000513450 C19orf57Q0VDD7 668 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 PWP1Q13610 501 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 TRAPPC3LQ5T215 181 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 TPTE2Q6XPS3 522 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 ERMP1Q7Z2K6 904 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 PODNQ7Z5L7 613 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 DMRTC2Q8IXT2 367 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms