RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 NBPF12Q5TAG4 269 aaPredicted RBP12.66□□□□□ -0.38
PTPN20-228ENST00000513266 COPS6Q7L5N1 327 aa12.66□□□□□ -0.38
PTPN20-228ENST00000513266 TRIM47Q96LD4 638 aa12.66□□□□□ -0.38
PTPN20-228ENST00000513266 UNC93B1Q9H1C4 597 aa12.66□□□□□ -0.38
PTPN20-228ENST00000513266 MAGEA10P43363 369 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-228ENST00000513266 STRIP1Q5VSL9 837 aa12.65□□□□□ -0.38
PTPN20-228ENST00000513266 FAM109BQ6ICB4 259 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-228ENST00000513266 C7orf61Q8IZ16 206 aa12.65□□□□□ -0.38
PTPN20-228ENST00000513266 RAET1EQ8TD07 263 aa12.65□□□□□ -0.38
PTPN20-228ENST00000513266 PNISRQ8TF01 805 aaKnown RBP12.65□□□□□ -0.38
PTPN20-228ENST00000513266 PPP2R3BQ9Y5P8 575 aa12.65□□□□□ -0.38
PTPN20-228ENST00000513266 DOCK3Q8IZD9 2030 aa12.65□□□□□ -0.38
PTPN20-228ENST00000513266 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 XDHP47989 1333 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 OSBPP22059 807 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 PSMC4P43686 418 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 MMP14P50281 582 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 GTF2A2P52657 109 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
PTPN20-228ENST00000513266 SUPT20HL1Q3ZLR7 823 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-228ENST00000513266 CC2D1BQ5T0F9 858 aaKnown RBP12.64□□□□□ -0.39
PTPN20-228ENST00000513266 KIAA0825Q8IV33 1275 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 FBXW7Q969H0 707 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
PTPN20-228ENST00000513266 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-228ENST00000513266 COL2A1P02458 1487 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-228ENST00000513266 SYN1P17600 705 aa12.63□□□□□ -0.39
PTPN20-228ENST00000513266 EIF2S2P20042 333 aaKnown RBP12.63□□□□□ -0.39
PTPN20-228ENST00000513266 UBXN2AP68543 259 aa12.63□□□□□ -0.39
PTPN20-228ENST00000513266 PAWRQ96IZ0 340 aaKnown RBP12.63□□□□□ -0.39
PTPN20-228ENST00000513266 PCDHAC2Q9Y5I4 1007 aa12.63□□□□□ -0.39
PTPN20-228ENST00000513266 MED23Q9ULK4 1368 aa12.63□□□□□ -0.39
PTPN20-228ENST00000513266 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
PTPN20-228ENST00000513266 DDX60LQ5H9U9 1706 aaKnown RBP12.62□□□□□ -0.39
PTPN20-228ENST00000513266 ARAP2Q8WZ64 1704 aa12.62□□□□□ -0.39
PTPN20-228ENST00000513266 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
PTPN20-228ENST00000513266 C17orf99Q6UX52 265 aa12.62□□□□□ -0.39
PTPN20-228ENST00000513266 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-228ENST00000513266 MAFAQ8NHW3 353 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-228ENST00000513266 DIS3LQ8TF46 1054 aaKnown RBP12.62□□□□□ -0.39
PTPN20-228ENST00000513266 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
PTPN20-228ENST00000513266 ISCA1Q9BUE6 129 aa12.62□□□□□ -0.39
PTPN20-228ENST00000513266 UBE2OQ9C0C9 1292 aaKnown RBP12.62□□□□□ -0.39
PTPN20-228ENST00000513266 AOX1Q06278 1338 aa12.62□□□□□ -0.39
PTPN20-228ENST00000513266 BTBD19C9JJ37 291 aa12.61□□□□□ -0.39
PTPN20-228ENST00000513266 TNFRSF10AO00220 468 aa12.61□□□□□ -0.39
PTPN20-228ENST00000513266 IRS4O14654 1257 aaPredicted RBP12.61□□□□□ -0.39
PTPN20-228ENST00000513266 TFRCP02786 760 aaKnown RBP12.61□□□□□ -0.39
PTPN20-228ENST00000513266 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
PTPN20-228ENST00000513266 CLRN2A0PK11 232 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 PER1O15534 1290 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-228ENST00000513266 WDHD1O75717 1129 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-228ENST00000513266 HSPA5P11021 654 aaKnown RBP12.6□□□□□ -0.39
PTPN20-228ENST00000513266 HOXD10P28358 340 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 VGLL4Q14135 290 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 DLGAP5Q15398 846 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 MTMR14Q8NCE2 650 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 DEFB118Q96PH6 123 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 CRISPLD2Q9H0B8 497 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 CPA4Q9UI42 421 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 CDH23Q9H251 3354 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 MYH3P11055 1940 aa12.6□□□□□ -0.39
PTPN20-228ENST00000513266 TMEM265A0A087WTH1 108 aa12.59□□□□□ -0.39
PTPN20-228ENST00000513266 FMNL1O95466 1100 aaPredicted RBP12.59□□□□□ -0.39
PTPN20-228ENST00000513266 PRKCZQ05513 592 aa12.59□□□□□ -0.39
PTPN20-228ENST00000513266 RASA3Q14644 834 aa12.59□□□□□ -0.39
PTPN20-228ENST00000513266 TTLL5Q6EMB2 1281 aa12.59□□□□□ -0.39
PTPN20-228ENST00000513266 NECAB2Q7Z6G3 386 aa12.59□□□□□ -0.39
PTPN20-228ENST00000513266 TXNRD3Q86VQ6 643 aa12.59□□□□□ -0.39
PTPN20-228ENST00000513266 SLAIN1Q8ND83 568 aa12.59□□□□□ -0.39
PTPN20-228ENST00000513266 HELBQ8NG08 1087 aaPredicted RBP12.59□□□□□ -0.39
PTPN20-228ENST00000513266 CDX2Q99626 313 aaPredicted RBP12.59□□□□□ -0.39
PTPN20-228ENST00000513266 ADGRA2Q96PE1 1338 aa12.59□□□□□ -0.39
PTPN20-228ENST00000513266 PIEZO1Q92508 2521 aa12.58□□□□□ -0.4
PTPN20-228ENST00000513266 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-228ENST00000513266 CAPN2P17655 700 aa12.58□□□□□ -0.4
PTPN20-228ENST00000513266 U2AF1Q01081 240 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTPN20-228ENST00000513266 COA1Q9GZY4 146 aa12.58□□□□□ -0.4
PTPN20-228ENST00000513266 VEZTQ9HBM0 779 aa12.58□□□□□ -0.4
PTPN20-228ENST00000513266 PAK6Q9NQU5 681 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-228ENST00000513266 GABRQQ9UN88 632 aa12.58□□□□□ -0.4
PTPN20-228ENST00000513266 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.4
PTPN20-228ENST00000513266 CETPP11597 493 aa12.57□□□□□ -0.4
PTPN20-228ENST00000513266 MAP3K12Q12852 859 aa12.57□□□□□ -0.4
PTPN20-228ENST00000513266 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
PTPN20-228ENST00000513266 CERS5Q8N5B7 392 aa12.57□□□□□ -0.4
PTPN20-228ENST00000513266 PRMT6Q96LA8 375 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-228ENST00000513266 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
PTPN20-228ENST00000513266 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
PTPN20-228ENST00000513266 SPDYE5A6NIY4 337 aa12.56□□□□□ -0.4
PTPN20-228ENST00000513266 INHAP05111 366 aa12.56□□□□□ -0.4
PTPN20-228ENST00000513266 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
PTPN20-228ENST00000513266 ELNP15502 786 aa12.56□□□□□ -0.4
PTPN20-228ENST00000513266 EIF4G2P78344 907 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTPN20-228ENST00000513266 GTF2IP78347 998 aa12.56□□□□□ -0.4
PTPN20-228ENST00000513266 MAP3K9P80192 1104 aa12.56□□□□□ -0.4
PTPN20-228ENST00000513266 ZNF697Q5TEC3 545 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms