RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 DCPSQ96C86 337 aaKnown RBP22.08■■□□□ 1.13
DDR1-272ENST00000513243 GGA3Q9NZ52 723 aa22.08■■□□□ 1.13
DDR1-272ENST00000513243 BCAMP50895 628 aa22.07■■□□□ 1.12
DDR1-272ENST00000513243 FKBP1AP62942 108 aaKnown RBP22.07■■□□□ 1.12
DDR1-272ENST00000513243 KRT26Q7Z3Y9 468 aa22.07■■□□□ 1.12
DDR1-272ENST00000513243 LPIN2Q92539 896 aa22.07■■□□□ 1.12
DDR1-272ENST00000513243 SLC5A1P13866 664 aa22.06■■□□□ 1.12
DDR1-272ENST00000513243 MMP14P50281 582 aa22.06■■□□□ 1.12
DDR1-272ENST00000513243 NBPF9Q3BBW0 867 aa22.06■■□□□ 1.12
DDR1-272ENST00000513243 ANGEL2Q5VTE6 544 aaKnown RBP22.06■■□□□ 1.12
DDR1-272ENST00000513243 C1orf115Q9H7X2 142 aa22.06■■□□□ 1.12
DDR1-272ENST00000513243 MKRN1Q9UHC7 482 aaKnown RBP22.06■■□□□ 1.12
DDR1-272ENST00000513243 HDAC9Q9UKV0 1011 aa22.06■■□□□ 1.12
DDR1-272ENST00000513243 IQSEC3Q9UPP2 1182 aaPredicted RBP22.06■■□□□ 1.12
DDR1-272ENST00000513243 ADM5C9JUS6 153 aa22.05■■□□□ 1.12
DDR1-272ENST00000513243 F8W031 263 aaPredicted RBP22.04■■□□□ 1.12
DDR1-272ENST00000513243 WNT10BO00744 389 aa22.04■■□□□ 1.12
DDR1-272ENST00000513243 CELF2O95319 508 aaKnown RBP22.04■■□□□ 1.12
DDR1-272ENST00000513243 MS4A1P11836 297 aa22.04■■□□□ 1.12
DDR1-272ENST00000513243 ATP2B3Q16720 1220 aa22.04■■□□□ 1.12
DDR1-272ENST00000513243 JMYQ8N9B5 988 aa22.04■■□□□ 1.12
DDR1-272ENST00000513243 POLR2AP24928 1970 aaKnown RBP22.03■■□□□ 1.12
DDR1-272ENST00000513243 CNTNAP1P78357 1384 aa22.03■■□□□ 1.12
DDR1-272ENST00000513243 ATP8B2P98198 1209 aa22.03■■□□□ 1.12
DDR1-272ENST00000513243 MFSD14BQ5SR56 506 aa22.03■■□□□ 1.12
DDR1-272ENST00000513243 SULF1Q8IWU6 871 aa22.03■■□□□ 1.12
DDR1-272ENST00000513243 ZBED3Q96IU2 234 aaPredicted RBP22.03■■□□□ 1.12
DDR1-272ENST00000513243 ABT1Q9ULW3 272 aaKnown RBP22.03■■□□□ 1.12
DDR1-272ENST00000513243 FRAT2O75474 233 aaPredicted RBP22.02■■□□□ 1.12
DDR1-272ENST00000513243 CHAF1AQ13111 956 aaPredicted RBP22.02■■□□□ 1.12
DDR1-272ENST00000513243 POLA2Q14181 598 aa22.02■■□□□ 1.12
DDR1-272ENST00000513243 ZNF408Q9H9D4 720 aa22.02■■□□□ 1.12
DDR1-272ENST00000513243 TRPM7Q96QT4 1865 aa22.02■■□□□ 1.12
DDR1-272ENST00000513243 RASSF10A6NK89 507 aa22.01■■□□□ 1.11
DDR1-272ENST00000513243 TFCP2Q12800 502 aa22.01■■□□□ 1.11
DDR1-272ENST00000513243 SSH3Q8TE77 659 aa22.01■■□□□ 1.11
DDR1-272ENST00000513243 SCAF8Q9UPN6 1271 aaKnown RBP22.01■■□□□ 1.11
DDR1-272ENST00000513243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.01■■□□□ 1.11
DDR1-272ENST00000513243 PITPNM2Q9BZ72 1349 aa22.01■■□□□ 1.11
DDR1-272ENST00000513243 TIMM10P62072 90 aa22■■□□□ 1.11
DDR1-272ENST00000513243 DLGAP5Q15398 846 aa22■■□□□ 1.11
DDR1-272ENST00000513243 GRIK5Q16478 980 aa22■■□□□ 1.11
DDR1-272ENST00000513243 DEFB115Q30KQ5 88 aa22■■□□□ 1.11
DDR1-272ENST00000513243 YTHDC1Q96MU7 727 aaKnown RBP22■■□□□ 1.11
DDR1-272ENST00000513243 PCDHAC2Q9Y5I4 1007 aa22■■□□□ 1.11
DDR1-272ENST00000513243 TLL2Q9Y6L7 1015 aa22■■□□□ 1.11
DDR1-272ENST00000513243 ADORA1P30542 326 aa21.99■■□□□ 1.11
DDR1-272ENST00000513243 G3BP1Q13283 466 aaKnown RBP eCLIP21.99■■□□□ 1.11
DDR1-272ENST00000513243 MVPQ14764 893 aaKnown RBP21.99■■□□□ 1.11
DDR1-272ENST00000513243 MTMR14Q8NCE2 650 aa21.99■■□□□ 1.11
DDR1-272ENST00000513243 TTF2Q9UNY4 1162 aaKnown RBP21.99■■□□□ 1.11
DDR1-272ENST00000513243 COG6Q9Y2V7 657 aa21.99■■□□□ 1.11
DDR1-272ENST00000513243 VEGFBP49765 207 aa21.98■■□□□ 1.11
DDR1-272ENST00000513243 CFAP100Q494V2 611 aa21.98■■□□□ 1.11
DDR1-272ENST00000513243 SAPCD2Q86UD0 394 aa21.98■■□□□ 1.11
DDR1-272ENST00000513243 TBC1D22AQ8WUA7 517 aa21.98■■□□□ 1.11
DDR1-272ENST00000513243 CDCA5Q96FF9 252 aa21.98■■□□□ 1.11
DDR1-272ENST00000513243 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
DDR1-272ENST00000513243 PHKA1P46020 1223 aa21.97■■□□□ 1.11
DDR1-272ENST00000513243 CEP85Q6P2H3 762 aa21.97■■□□□ 1.11
DDR1-272ENST00000513243 PRMT6Q96LA8 375 aaPredicted RBP21.97■■□□□ 1.11
DDR1-272ENST00000513243 AKAP2Q9Y2D5 859 aa21.97■■□□□ 1.11
DDR1-272ENST00000513243 SPDYE2BA6NHP3 402 aa21.96■■□□□ 1.11
DDR1-272ENST00000513243 SPDYE6P0CI01 402 aa21.96■■□□□ 1.11
DDR1-272ENST00000513243 C20orf194Q5TEA3 1177 aa21.96■■□□□ 1.11
DDR1-272ENST00000513243 GNL3LQ9NVN8 582 aaKnown RBP21.96■■□□□ 1.11
DDR1-272ENST00000513243 SURF6O75683 361 aaKnown RBP21.95■■□□□ 1.1
DDR1-272ENST00000513243 RBM5P52756 815 aaKnown RBP eCLIP21.95■■□□□ 1.1
DDR1-272ENST00000513243 CCDC102BQ68D86 513 aa21.95■■□□□ 1.1
DDR1-272ENST00000513243 XAGE2Q96GT9 111 aa21.95■■□□□ 1.1
DDR1-272ENST00000513243 SERPINA10Q9UK55 444 aa21.95■■□□□ 1.1
DDR1-272ENST00000513243 DDX19BQ9UMR2 479 aa21.95■■□□□ 1.1
DDR1-272ENST00000513243 AOX1Q06278 1338 aa21.95■■□□□ 1.1
DDR1-272ENST00000513243 COL1A1P02452 1464 aaPredicted RBP21.95■■□□□ 1.1
DDR1-272ENST00000513243 PDE3AQ14432 1141 aa21.94■■□□□ 1.1
DDR1-272ENST00000513243 PRAMEF18Q5VWM3 479 aa21.94■■□□□ 1.1
DDR1-272ENST00000513243 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.94■■□□□ 1.1
DDR1-272ENST00000513243 WDR66Q8TBY9 1149 aa21.94■■□□□ 1.1
DDR1-272ENST00000513243 GBA2Q9HCG7 927 aaPredicted RBP21.94■■□□□ 1.1
DDR1-272ENST00000513243 ZBTB40Q9NUA8 1239 aa21.94■■□□□ 1.1
DDR1-272ENST00000513243 NOP58Q9Y2X3 529 aaKnown RBP21.94■■□□□ 1.1
DDR1-272ENST00000513243 PAXIP1Q6ZW49 1069 aaPredicted RBP21.93■■□□□ 1.1
DDR1-272ENST00000513243 APOBEC3FQ8IUX4 373 aaKnown RBP21.93■■□□□ 1.1
DDR1-272ENST00000513243 C2orf69Q8N8R5 385 aa21.93■■□□□ 1.1
DDR1-272ENST00000513243 ARAP2Q8WZ64 1704 aa21.93■■□□□ 1.1
DDR1-272ENST00000513243 NEUROD6Q96NK8 337 aa21.93■■□□□ 1.1
DDR1-272ENST00000513243 SUGT1Q9Y2Z0 365 aa21.93■■□□□ 1.1
DDR1-272ENST00000513243 WDR33Q9C0J8 1336 aaKnown RBP21.92■■□□□ 1.1
DDR1-272ENST00000513243 CLRN2A0PK11 232 aa21.92■■□□□ 1.1
DDR1-272ENST00000513243 SEMA3EO15041 775 aa21.92■■□□□ 1.1
DDR1-272ENST00000513243 ZBTB22O15209 634 aa21.92■■□□□ 1.1
DDR1-272ENST00000513243 MYO1BO43795 1136 aa21.92■■□□□ 1.1
DDR1-272ENST00000513243 CRKP46108 304 aa21.92■■□□□ 1.1
DDR1-272ENST00000513243 OS9Q13438 667 aaPredicted RBP21.92■■□□□ 1.1
DDR1-272ENST00000513243 CYP4F22Q6NT55 531 aa21.92■■□□□ 1.1
DDR1-272ENST00000513243 HHIPL1Q96JK4 782 aa21.92■■□□□ 1.1
DDR1-272ENST00000513243 CAPNS2Q96L46 248 aa21.92■■□□□ 1.1
DDR1-272ENST00000513243 DENND2AQ9ULE3 1009 aa21.92■■□□□ 1.1
DDR1-272ENST00000513243 HUNKP57058 714 aa21.91■■□□□ 1.1
DDR1-272ENST00000513243 HDLBPQ00341 1268 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms