RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 SPATA5Q8NB90 893 aa11.33□□□□□ -0.6
DHFR-206ENST00000513048 CNKSR1Q969H4 720 aa11.33□□□□□ -0.6
DHFR-206ENST00000513048 ZNF622Q969S3 477 aaKnown RBP eCLIP11.33□□□□□ -0.6
DHFR-206ENST00000513048 FAM227BQ96M60 508 aa11.33□□□□□ -0.6
DHFR-206ENST00000513048 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
DHFR-206ENST00000513048 ANKIB1Q9P2G1 1089 aa11.33□□□□□ -0.6
DHFR-206ENST00000513048 PDS5AQ29RF7 1337 aaKnown RBP11.33□□□□□ -0.6
DHFR-206ENST00000513048 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
DHFR-206ENST00000513048 A0A0D9SFI3 127 aa11.32□□□□□ -0.6
DHFR-206ENST00000513048 SEMA3EO15041 775 aa11.32□□□□□ -0.6
DHFR-206ENST00000513048 DPEP1P16444 411 aa11.32□□□□□ -0.6
DHFR-206ENST00000513048 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
DHFR-206ENST00000513048 RBM25P49756 843 aaKnown RBP11.32□□□□□ -0.6
DHFR-206ENST00000513048 CAVIN4Q5BKX8 364 aa11.32□□□□□ -0.6
DHFR-206ENST00000513048 CWC27Q6UX04 472 aaKnown RBP11.32□□□□□ -0.6
DHFR-206ENST00000513048 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
DHFR-206ENST00000513048 DIAPH3Q9NSV4 1193 aa11.32□□□□□ -0.6
DHFR-206ENST00000513048 GGA1Q9UJY5 639 aa11.32□□□□□ -0.6
DHFR-206ENST00000513048 NSFL1CQ9UNZ2 370 aaKnown RBP11.32□□□□□ -0.6
DHFR-206ENST00000513048 MYH13Q9UKX3 1938 aa11.32□□□□□ -0.6
DHFR-206ENST00000513048 RAD50Q92878 1312 aa11.32□□□□□ -0.6
DHFR-206ENST00000513048 RNF113AO15541 343 aaKnown RBP11.31□□□□□ -0.6
DHFR-206ENST00000513048 EIF5BO60841 1220 aaKnown RBP11.31□□□□□ -0.6
DHFR-206ENST00000513048 UFL1O94874 794 aa11.31□□□□□ -0.6
DHFR-206ENST00000513048 POLD1P28340 1107 aa11.31□□□□□ -0.6
DHFR-206ENST00000513048 SLFNL1Q499Z3 407 aa11.31□□□□□ -0.6
DHFR-206ENST00000513048 ZMYM1Q5SVZ6 1142 aa11.31□□□□□ -0.6
DHFR-206ENST00000513048 TDRD7Q8NHU6 1098 aaKnown RBP11.31□□□□□ -0.6
DHFR-206ENST00000513048 C22orf23Q9BZE7 217 aa11.31□□□□□ -0.6
DHFR-206ENST00000513048 LSG1Q9H089 658 aaKnown RBP11.31□□□□□ -0.6
DHFR-206ENST00000513048 GNL3LQ9NVN8 582 aaKnown RBP11.31□□□□□ -0.6
DHFR-206ENST00000513048 A0A0G2JLW4 131 aa11.3□□□□□ -0.6
DHFR-206ENST00000513048 EPB41L2O43491 1005 aaKnown RBP11.3□□□□□ -0.6
DHFR-206ENST00000513048 REC8O95072 547 aa11.3□□□□□ -0.6
DHFR-206ENST00000513048 TGFB2P61812 414 aa11.3□□□□□ -0.6
DHFR-206ENST00000513048 TTF1Q15361 905 aaPredicted RBP11.3□□□□□ -0.6
DHFR-206ENST00000513048 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
DHFR-206ENST00000513048 MPNDQ8N594 471 aa11.3□□□□□ -0.6
DHFR-206ENST00000513048 RUFY2Q8WXA3 655 aa11.3□□□□□ -0.6
DHFR-206ENST00000513048 KIF2CQ99661 725 aa11.3□□□□□ -0.6
DHFR-206ENST00000513048 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
DHFR-206ENST00000513048 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
DHFR-206ENST00000513048 CHD4Q14839 1912 aa11.3□□□□□ -0.6
DHFR-206ENST00000513048 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
DHFR-206ENST00000513048 ZFYP08048 801 aaPredicted RBP11.29□□□□□ -0.6
DHFR-206ENST00000513048 IL1R1P14778 569 aa11.29□□□□□ -0.6
DHFR-206ENST00000513048 ADD2P35612 726 aa11.29□□□□□ -0.6
DHFR-206ENST00000513048 ZNF589Q86UQ0 364 aaPredicted RBP11.29□□□□□ -0.6
DHFR-206ENST00000513048 IL17RAQ96F46 866 aa11.29□□□□□ -0.6
DHFR-206ENST00000513048 SEC62Q99442 399 aaKnown RBP11.29□□□□□ -0.6
DHFR-206ENST00000513048 UPF2Q9HAU5 1272 aaKnown RBP11.29□□□□□ -0.6
DHFR-206ENST00000513048 HELLSQ9NRZ9 838 aa11.29□□□□□ -0.6
DHFR-206ENST00000513048 WWC3Q9ULE0 1092 aa11.29□□□□□ -0.6
DHFR-206ENST00000513048 DENND2AQ9ULE3 1009 aa11.29□□□□□ -0.6
DHFR-206ENST00000513048 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
DHFR-206ENST00000513048 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 PDE6AP16499 860 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 PTH1RQ03431 593 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 UBE3CQ15386 1083 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 MCMDC2Q4G0Z9 681 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 CC2D2BQ6DHV5 1058 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 DPP8Q6V1X1 898 aaPredicted RBP11.28□□□□□ -0.6
DHFR-206ENST00000513048 ZNF804AQ7Z570 1209 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 OSBP2Q969R2 916 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 ANO2Q9NQ90 1003 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 CD2APQ9Y5K6 639 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 MAST3O60307 1309 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 SALL1Q9NSC2 1324 aa11.28□□□□□ -0.6
DHFR-206ENST00000513048 MAST2Q6P0Q8 1798 aa11.27□□□□□ -0.61
DHFR-206ENST00000513048 M0R2C6 588 aa11.27□□□□□ -0.61
DHFR-206ENST00000513048 CCDC129Q6ZRS4 1044 aa11.27□□□□□ -0.61
DHFR-206ENST00000513048 ZNF384Q8TF68 577 aa11.27□□□□□ -0.61
DHFR-206ENST00000513048 APPBP2Q92624 585 aa11.27□□□□□ -0.61
DHFR-206ENST00000513048 KCNB2Q92953 911 aa11.27□□□□□ -0.61
DHFR-206ENST00000513048 CCDC171Q6TFL3 1326 aa11.27□□□□□ -0.61
DHFR-206ENST00000513048 FOXP2O15409 715 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 C21orf2O43822 256 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 IDH1O75874 414 aaKnown RBP11.26□□□□□ -0.61
DHFR-206ENST00000513048 HSPA4P34932 840 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 LRRFIP1Q32MZ4 808 aaKnown RBP11.26□□□□□ -0.61
DHFR-206ENST00000513048 SLC9C2Q5TAH2 1124 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 ZSCAN25Q6NSZ9 544 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 MAP4K1Q92918 833 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.26□□□□□ -0.61
DHFR-206ENST00000513048 COA1Q9GZY4 146 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 PUS7LQ9H0K6 701 aaKnown RBP11.26□□□□□ -0.61
DHFR-206ENST00000513048 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 FAM205AQ6ZU69 1335 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 ZNF532Q9HCE3 1301 aa11.26□□□□□ -0.61
DHFR-206ENST00000513048 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
DHFR-206ENST00000513048 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
DHFR-206ENST00000513048 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
DHFR-206ENST00000513048 MAP3K12Q12852 859 aa11.25□□□□□ -0.61
DHFR-206ENST00000513048 CHAF1AQ13111 956 aaPredicted RBP11.25□□□□□ -0.61
DHFR-206ENST00000513048 WASHC4Q2M389 1173 aa11.25□□□□□ -0.61
DHFR-206ENST00000513048 GRIPAP1Q4V328 841 aa11.25□□□□□ -0.61
DHFR-206ENST00000513048 EYA3Q99504 573 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms