RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 POTEJP0CG39 1038 aa21.43■■□□□ 1.02
DDR1-270ENST00000513043 AGBL3Q8NEM8 1001 aa21.43■■□□□ 1.02
DDR1-270ENST00000513043 EAF2Q96CJ1 260 aaPredicted RBP21.43■■□□□ 1.02
DDR1-270ENST00000513043 KIF1BPQ96EK5 621 aa21.43■■□□□ 1.02
DDR1-270ENST00000513043 CCDC8Q9H0W5 538 aaPredicted RBP21.43■■□□□ 1.02
DDR1-270ENST00000513043 GPR108Q9NPR9 543 aa21.43■■□□□ 1.02
DDR1-270ENST00000513043 ARAP2Q8WZ64 1704 aa21.43■■□□□ 1.02
DDR1-270ENST00000513043 SCN4AP35499 1836 aa21.43■■□□□ 1.02
DDR1-270ENST00000513043 ZNF646O15015 1829 aaPredicted RBP21.42■■□□□ 1.02
DDR1-270ENST00000513043 RAB11FIP3O75154 756 aa21.42■■□□□ 1.02
DDR1-270ENST00000513043 CERS5Q8N5B7 392 aa21.42■■□□□ 1.02
DDR1-270ENST00000513043 DPF2Q92785 391 aa21.42■■□□□ 1.02
DDR1-270ENST00000513043 GMLQ99445 158 aa21.42■■□□□ 1.02
DDR1-270ENST00000513043 DBNDD2Q9BQY9 259 aa21.42■■□□□ 1.02
DDR1-270ENST00000513043 GNL3LQ9NVN8 582 aaKnown RBP21.42■■□□□ 1.02
DDR1-270ENST00000513043 TLR7Q9NYK1 1049 aaKnown RBP21.42■■□□□ 1.02
DDR1-270ENST00000513043 FAM205AQ6ZU69 1335 aa21.41■■□□□ 1.02
DDR1-270ENST00000513043 F8W031 263 aaPredicted RBP21.41■■□□□ 1.02
DDR1-270ENST00000513043 H7C1D1 291 aa21.41■■□□□ 1.02
DDR1-270ENST00000513043 CENPBP07199 599 aaPredicted RBP21.41■■□□□ 1.02
DDR1-270ENST00000513043 AAMPQ13685 434 aa21.41■■□□□ 1.02
DDR1-270ENST00000513043 RBM26Q5T8P6 1007 aaKnown RBP21.41■■□□□ 1.02
DDR1-270ENST00000513043 SAMD7Q7Z3H4 446 aa21.41■■□□□ 1.02
DDR1-270ENST00000513043 AACSQ86V21 672 aa21.41■■□□□ 1.02
DDR1-270ENST00000513043 KIAA0825Q8IV33 1275 aa21.41■■□□□ 1.02
DDR1-270ENST00000513043 MYO3BQ8WXR4 1341 aa21.4■■□□□ 1.02
DDR1-270ENST00000513043 SMARCA5O60264 1052 aaPredicted RBP21.4■■□□□ 1.02
DDR1-270ENST00000513043 USP17L8P0C7I0 530 aa21.4■■□□□ 1.02
DDR1-270ENST00000513043 TBC1D10BQ4KMP7 808 aaPredicted RBP21.4■■□□□ 1.02
DDR1-270ENST00000513043 MFSD14BQ5SR56 506 aa21.4■■□□□ 1.02
DDR1-270ENST00000513043 TRPM4Q8TD43 1214 aa21.4■■□□□ 1.02
DDR1-270ENST00000513043 DCTPP1Q9H773 170 aa21.4■■□□□ 1.02
DDR1-270ENST00000513043 ADARB2Q9NS39 739 aaKnown RBP21.4■■□□□ 1.02
DDR1-270ENST00000513043 COL1A1P02452 1464 aaPredicted RBP21.39■■□□□ 1.02
DDR1-270ENST00000513043 EGFRP00533 1210 aa21.39■■□□□ 1.01
DDR1-270ENST00000513043 DBNLQ9UJU6 430 aaKnown RBP21.39■■□□□ 1.01
DDR1-270ENST00000513043 CLEC11AQ9Y240 323 aa21.39■■□□□ 1.01
DDR1-270ENST00000513043 RASGRF1Q13972 1273 aa21.38■■□□□ 1.01
DDR1-270ENST00000513043 GRIK5Q16478 980 aa21.38■■□□□ 1.01
DDR1-270ENST00000513043 PNMA8AQ86V59 439 aaPredicted RBP21.38■■□□□ 1.01
DDR1-270ENST00000513043 CLASRPQ8N2M8 674 aaKnown RBP21.38■■□□□ 1.01
DDR1-270ENST00000513043 LRRCC1Q9C099 1032 aa21.38■■□□□ 1.01
DDR1-270ENST00000513043 TOMM70O94826 608 aa21.37■■□□□ 1.01
DDR1-270ENST00000513043 TTC39AQ5SRH9 613 aa21.37■■□□□ 1.01
DDR1-270ENST00000513043 USP50Q70EL3 339 aaPredicted RBP21.37■■□□□ 1.01
DDR1-270ENST00000513043 DENND2AQ9ULE3 1009 aa21.37■■□□□ 1.01
DDR1-270ENST00000513043 IFIT2P09913 472 aaKnown RBP21.36■■□□□ 1.01
DDR1-270ENST00000513043 HIRAP54198 1017 aaPredicted RBP21.36■■□□□ 1.01
DDR1-270ENST00000513043 ZNF280AP59817 542 aaPredicted RBP21.36■■□□□ 1.01
DDR1-270ENST00000513043 FKBP1AP62942 108 aaKnown RBP21.36■■□□□ 1.01
DDR1-270ENST00000513043 HDAC1Q13547 482 aaPredicted RBP21.36■■□□□ 1.01
DDR1-270ENST00000513043 SCARF1Q14162 830 aa21.36■■□□□ 1.01
DDR1-270ENST00000513043 CCDC158Q5M9N0 1113 aa21.36■■□□□ 1.01
DDR1-270ENST00000513043 PI16Q6UXB8 463 aa21.36■■□□□ 1.01
DDR1-270ENST00000513043 OGFOD1Q8N543 542 aa21.36■■□□□ 1.01
DDR1-270ENST00000513043 MYH13Q9UKX3 1938 aa21.35■■□□□ 1.01
DDR1-270ENST00000513043 SEMA3EO15041 775 aa21.35■■□□□ 1.01
DDR1-270ENST00000513043 HSPA6P17066 643 aa21.35■■□□□ 1.01
DDR1-270ENST00000513043 KIF4BQ2VIQ3 1234 aa21.35■■□□□ 1.01
DDR1-270ENST00000513043 WDR66Q8TBY9 1149 aa21.35■■□□□ 1.01
DDR1-270ENST00000513043 TBC1D22AQ8WUA7 517 aa21.35■■□□□ 1.01
DDR1-270ENST00000513043 MYOZ2Q9NPC6 264 aa21.35■■□□□ 1.01
DDR1-270ENST00000513043 IGHDP01880 384 aa21.34■■□□□ 1.01
DDR1-270ENST00000513043 UQCRFS1P1P0C7P4 283 aa21.34■■□□□ 1.01
DDR1-270ENST00000513043 ARID4AP29374 1257 aaPredicted RBP21.34■■□□□ 1.01
DDR1-270ENST00000513043 MCAMP43121 646 aa21.34■■□□□ 1.01
DDR1-270ENST00000513043 LDHDQ86WU2 507 aa21.34■■□□□ 1.01
DDR1-270ENST00000513043 RBM46Q8TBY0 533 aaKnown RBP21.34■■□□□ 1.01
DDR1-270ENST00000513043 RWDD1Q9H446 243 aaPredicted RBP21.34■■□□□ 1.01
DDR1-270ENST00000513043 SNRKQ9NRH2 765 aa21.34■■□□□ 1.01
DDR1-270ENST00000513043 HMG20BQ9P0W2 317 aa21.34■■□□□ 1.01
DDR1-270ENST00000513043 HDAC9Q9UKV0 1011 aa21.34■■□□□ 1.01
DDR1-270ENST00000513043 TTF2Q9UNY4 1162 aaKnown RBP21.34■■□□□ 1.01
DDR1-270ENST00000513043 MAP1SQ66K74 1059 aaPredicted RBP21.33■■□□□ 1.01
DDR1-270ENST00000513043 CHADLQ6NUI6 762 aa21.33■■□□□ 1.01
DDR1-270ENST00000513043 SPATA5Q8NB90 893 aa21.33■■□□□ 1.01
DDR1-270ENST00000513043 SMC1BQ8NDV3 1235 aa21.32■■□□□ 1
DDR1-270ENST00000513043 PCDHAC2Q9Y5I4 1007 aa21.32■■□□□ 1
DDR1-270ENST00000513043 ASTN2O75129 1339 aaPredicted RBP21.31■■□□□ 1
DDR1-270ENST00000513043 RBM5P52756 815 aaKnown RBP eCLIP21.31■■□□□ 1
DDR1-270ENST00000513043 ABCF2Q9UG63 623 aa21.31■■□□□ 1
DDR1-270ENST00000513043 ADAMTSL1Q8N6G6 1762 aa21.31■■□□□ 1
DDR1-270ENST00000513043 PRDX5P30044 214 aa21.3■■□□□ 1
DDR1-270ENST00000513043 NBPF9Q3BBW0 867 aa21.3■■□□□ 1
DDR1-270ENST00000513043 CFAP100Q494V2 611 aa21.3■■□□□ 1
DDR1-270ENST00000513043 ANKRD45Q5TZF3 282 aa21.3■■□□□ 1
DDR1-270ENST00000513043 TBC1D9Q6ZT07 1266 aa21.3■■□□□ 1
DDR1-270ENST00000513043 GCC1Q96CN9 775 aa21.3■■□□□ 1
DDR1-270ENST00000513043 NDUFB9Q9Y6M9 179 aa21.3■■□□□ 1
DDR1-270ENST00000513043 LDHBP07195 334 aaKnown RBP21.29■■□□□ 1
DDR1-270ENST00000513043 DLGAP5Q15398 846 aa21.29■■□□□ 1
DDR1-270ENST00000513043 B4GALNT3Q6L9W6 998 aa21.29■■□□□ 1
DDR1-270ENST00000513043 PDS5AQ29RF7 1337 aaKnown RBP21.29■■□□□ 1
DDR1-270ENST00000513043 SALL1Q9NSC2 1324 aa21.29■■□□□ 1
DDR1-270ENST00000513043 WNT10BO00744 389 aa21.28■■□□□ 1
DDR1-270ENST00000513043 ZAP70P43403 619 aa21.28■■□□□ 1
DDR1-270ENST00000513043 ZNF512BQ96KM6 892 aaPredicted RBP21.28■■□□□ 1
DDR1-270ENST00000513043 GGA3Q9NZ52 723 aa21.28■■□□□ 1
DDR1-270ENST00000513043 ZBTB47Q9UFB7 747 aaPredicted RBP21.28■■□□□ 1
DDR1-270ENST00000513043 ZBTB22O15209 634 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms