RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 FOXO4P98177 505 aa18.43■□□□□ 0.54
LETM1-207ENST00000512669 PTPN12Q05209 780 aaKnown RBP18.43■□□□□ 0.54
LETM1-207ENST00000512669 LDLRAD1Q5T700 205 aa18.43■□□□□ 0.54
LETM1-207ENST00000512669 TXNRD3Q86VQ6 643 aa18.43■□□□□ 0.54
LETM1-207ENST00000512669 MTMR14Q8NCE2 650 aa18.43■□□□□ 0.54
LETM1-207ENST00000512669 ZBED3Q96IU2 234 aaPredicted RBP18.43■□□□□ 0.54
LETM1-207ENST00000512669 MANSC4A6NHS7 340 aaPredicted RBP18.42■□□□□ 0.54
LETM1-207ENST00000512669 ZBTB48P10074 688 aaPredicted RBP18.42■□□□□ 0.54
LETM1-207ENST00000512669 GTF2IP78347 998 aa18.42■□□□□ 0.54
LETM1-207ENST00000512669 DLGAP5Q15398 846 aa18.42■□□□□ 0.54
LETM1-207ENST00000512669 EPHA10Q5JZY3 1008 aa18.42■□□□□ 0.54
LETM1-207ENST00000512669 SPRYD7Q5W111 196 aa18.42■□□□□ 0.54
LETM1-207ENST00000512669 ANGEL1Q9UNK9 670 aaKnown RBP18.42■□□□□ 0.54
LETM1-207ENST00000512669 ECM29Q5VYK3 1845 aa18.42■□□□□ 0.54
LETM1-207ENST00000512669 ANKRD18BA2A2Z9 1011 aa18.41■□□□□ 0.54
LETM1-207ENST00000512669 MYO1BO43795 1136 aa18.41■□□□□ 0.54
LETM1-207ENST00000512669 PPP1R12BO60237 982 aaPredicted RBP18.41■□□□□ 0.54
LETM1-207ENST00000512669 CHRNDQ07001 517 aa18.41■□□□□ 0.54
LETM1-207ENST00000512669 MAP3K11Q16584 847 aa18.41■□□□□ 0.54
LETM1-207ENST00000512669 C15orf52Q6ZUT6 534 aaKnown RBP18.41■□□□□ 0.54
LETM1-207ENST00000512669 SSH1Q8WYL5 1049 aa18.41■□□□□ 0.54
LETM1-207ENST00000512669 LAMB1P07942 1786 aa18.4■□□□□ 0.54
LETM1-207ENST00000512669 FKBP1AP62942 108 aaKnown RBP18.4■□□□□ 0.54
LETM1-207ENST00000512669 MKRN3Q13064 507 aaKnown RBP18.4■□□□□ 0.54
LETM1-207ENST00000512669 DEFB129Q9H1M3 183 aa18.4■□□□□ 0.54
LETM1-207ENST00000512669 CD209Q9NNX6 404 aa18.4■□□□□ 0.54
LETM1-207ENST00000512669 SUPT20HL1Q3ZLR7 823 aa18.39■□□□□ 0.53
LETM1-207ENST00000512669 SLC4A10Q6U841 1118 aa18.39■□□□□ 0.53
LETM1-207ENST00000512669 ZNF804AQ7Z570 1209 aa18.39■□□□□ 0.53
LETM1-207ENST00000512669 SLC10A4Q96EP9 437 aa18.39■□□□□ 0.53
LETM1-207ENST00000512669 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
LETM1-207ENST00000512669 GRM8O00222 908 aa18.38■□□□□ 0.53
LETM1-207ENST00000512669 ALDH1L1O75891 902 aa18.38■□□□□ 0.53
LETM1-207ENST00000512669 KLRK1P26718 216 aa18.38■□□□□ 0.53
LETM1-207ENST00000512669 IFIT5Q13325 482 aaKnown RBP18.38■□□□□ 0.53
LETM1-207ENST00000512669 PRKG1Q13976 671 aa18.38■□□□□ 0.53
LETM1-207ENST00000512669 MIER1Q8N108 512 aa18.38■□□□□ 0.53
LETM1-207ENST00000512669 INTS3Q68E01 1043 aaKnown RBP18.37■□□□□ 0.53
LETM1-207ENST00000512669 OTUD7BQ6GQQ9 843 aa18.37■□□□□ 0.53
LETM1-207ENST00000512669 IFNL1Q8IU54 200 aa18.37■□□□□ 0.53
LETM1-207ENST00000512669 GCC1Q96CN9 775 aa18.37■□□□□ 0.53
LETM1-207ENST00000512669 SRCIN1Q9C0H9 1055 aa18.37■□□□□ 0.53
LETM1-207ENST00000512669 NBPF7P0C2Y1 421 aaPredicted RBP18.36■□□□□ 0.53
LETM1-207ENST00000512669 IL1R1P14778 569 aa18.36■□□□□ 0.53
LETM1-207ENST00000512669 IREB2P48200 963 aaKnown RBP18.36■□□□□ 0.53
LETM1-207ENST00000512669 LMBR1LQ6UX01 489 aa18.36■□□□□ 0.53
LETM1-207ENST00000512669 IRS2Q9Y4H2 1338 aa18.36■□□□□ 0.53
LETM1-207ENST00000512669 A0A1B0GUL6 1792 aa18.35■□□□□ 0.53
LETM1-207ENST00000512669 SPDYE2BA6NHP3 402 aa18.35■□□□□ 0.53
LETM1-207ENST00000512669 SPDYE6P0CI01 402 aa18.35■□□□□ 0.53
LETM1-207ENST00000512669 SUCLG2Q96I99 432 aa18.35■□□□□ 0.53
LETM1-207ENST00000512669 WNK4Q96J92 1243 aa18.35■□□□□ 0.53
LETM1-207ENST00000512669 SSC5DA1L4H1 1573 aa18.34■□□□□ 0.53
LETM1-207ENST00000512669 UTYO14607 1347 aa18.34■□□□□ 0.53
LETM1-207ENST00000512669 SNAP23O00161 211 aa18.34■□□□□ 0.53
LETM1-207ENST00000512669 TNFAIP1Q13829 316 aa18.34■□□□□ 0.53
LETM1-207ENST00000512669 CFAP100Q494V2 611 aa18.34■□□□□ 0.53
LETM1-207ENST00000512669 CERS5Q8N5B7 392 aa18.34■□□□□ 0.53
LETM1-207ENST00000512669 ERO1AQ96HE7 468 aa18.34■□□□□ 0.53
LETM1-207ENST00000512669 ZNF594Q96JF6 807 aaPredicted RBP18.34■□□□□ 0.53
LETM1-207ENST00000512669 C9orf78Q9NZ63 289 aaPredicted RBP18.34■□□□□ 0.53
LETM1-207ENST00000512669 TRIM17Q9Y577 477 aa18.34■□□□□ 0.53
LETM1-207ENST00000512669 PTPRCP08575 1304 aa18.33■□□□□ 0.53
LETM1-207ENST00000512669 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.52
LETM1-207ENST00000512669 R3HDMLQ9H3Y0 253 aa18.33■□□□□ 0.52
LETM1-207ENST00000512669 CHMP3Q9Y3E7 222 aa18.33■□□□□ 0.52
LETM1-207ENST00000512669 TAF5LO75529 589 aa18.32■□□□□ 0.52
LETM1-207ENST00000512669 CCDC57Q2TAC2 916 aa18.32■□□□□ 0.52
LETM1-207ENST00000512669 DIEXFQ68CQ4 756 aaKnown RBP18.32■□□□□ 0.52
LETM1-207ENST00000512669 OTOP1Q7RTM1 612 aa18.32■□□□□ 0.52
LETM1-207ENST00000512669 ANKRD13AQ8IZ07 590 aa18.32■□□□□ 0.52
LETM1-207ENST00000512669 HELBQ8NG08 1087 aaPredicted RBP18.32■□□□□ 0.52
LETM1-207ENST00000512669 VEZTQ9HBM0 779 aa18.32■□□□□ 0.52
LETM1-207ENST00000512669 IGF2BP3O00425 579 aaKnown RBP eCLIP18.31■□□□□ 0.52
LETM1-207ENST00000512669 TAF7LQ5H9L4 462 aa18.31■□□□□ 0.52
LETM1-207ENST00000512669 CLMNQ96JQ2 1002 aa18.31■□□□□ 0.52
LETM1-207ENST00000512669 RBBP6Q7Z6E9 1792 aaKnown RBP18.31■□□□□ 0.52
LETM1-207ENST00000512669 FAM205AQ6ZU69 1335 aa18.3■□□□□ 0.52
LETM1-207ENST00000512669 CLRN2A0PK11 232 aa18.3■□□□□ 0.52
LETM1-207ENST00000512669 F8W031 263 aaPredicted RBP18.3■□□□□ 0.52
LETM1-207ENST00000512669 RBM5P52756 815 aaKnown RBP eCLIP18.3■□□□□ 0.52
LETM1-207ENST00000512669 LDHAL6AQ6ZMR3 332 aa18.3■□□□□ 0.52
LETM1-207ENST00000512669 ANKRD44Q8N8A2 993 aa18.3■□□□□ 0.52
LETM1-207ENST00000512669 PRMT6Q96LA8 375 aaPredicted RBP18.3■□□□□ 0.52
LETM1-207ENST00000512669 USP44Q9H0E7 712 aa18.3■□□□□ 0.52
LETM1-207ENST00000512669 SERPINA10Q9UK55 444 aa18.3■□□□□ 0.52
LETM1-207ENST00000512669 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
LETM1-207ENST00000512669 RASA3Q14644 834 aa18.29■□□□□ 0.52
LETM1-207ENST00000512669 ARHGEF6Q15052 776 aa18.29■□□□□ 0.52
LETM1-207ENST00000512669 RABL6Q3YEC7 729 aaPredicted RBP18.29■□□□□ 0.52
LETM1-207ENST00000512669 NBPF12Q5TAG4 269 aaPredicted RBP18.29■□□□□ 0.52
LETM1-207ENST00000512669 PUS3Q9BZE2 481 aaKnown RBP18.29■□□□□ 0.52
LETM1-207ENST00000512669 CNNM1Q9NRU3 951 aa18.29■□□□□ 0.52
LETM1-207ENST00000512669 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
LETM1-207ENST00000512669 FZD1Q9UP38 647 aa18.29■□□□□ 0.52
LETM1-207ENST00000512669 ARAP2Q8WZ64 1704 aa18.29■□□□□ 0.52
LETM1-207ENST00000512669 SPDYE2Q495Y8 402 aa18.28■□□□□ 0.52
LETM1-207ENST00000512669 BICC1Q9H694 974 aaKnown RBP18.28■□□□□ 0.52
LETM1-207ENST00000512669 NOB1Q9ULX3 412 aaKnown RBP18.28■□□□□ 0.52
LETM1-207ENST00000512669 PTPN22Q9Y2R2 807 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms