RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 FAM122AQ96E09 287 aa12.96□□□□□ -0.33
NEDD9-213ENST00000512665 THUMPD2Q9BTF0 503 aaKnown RBP12.96□□□□□ -0.33
NEDD9-213ENST00000512665 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
NEDD9-213ENST00000512665 COPS6Q7L5N1 327 aa12.95□□□□□ -0.34
NEDD9-213ENST00000512665 RAET1EQ8TD07 263 aa12.95□□□□□ -0.34
NEDD9-213ENST00000512665 FAM89AQ96GI7 184 aa12.95□□□□□ -0.34
NEDD9-213ENST00000512665 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
NEDD9-213ENST00000512665 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
NEDD9-213ENST00000512665 SLAIN1Q8ND83 568 aa12.94□□□□□ -0.34
NEDD9-213ENST00000512665 ISCA1Q9BUE6 129 aa12.94□□□□□ -0.34
NEDD9-213ENST00000512665 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
NEDD9-213ENST00000512665 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
NEDD9-213ENST00000512665 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
NEDD9-213ENST00000512665 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
NEDD9-213ENST00000512665 OSBPP22059 807 aa12.93□□□□□ -0.34
NEDD9-213ENST00000512665 EIF4G2P78344 907 aaKnown RBP eCLIP12.93□□□□□ -0.34
NEDD9-213ENST00000512665 C17orf99Q6UX52 265 aa12.93□□□□□ -0.34
NEDD9-213ENST00000512665 XAGE3Q8WTP9 111 aa12.93□□□□□ -0.34
NEDD9-213ENST00000512665 CRISPLD2Q9H0B8 497 aa12.93□□□□□ -0.34
NEDD9-213ENST00000512665 MYPNQ86TC9 1320 aa12.92□□□□□ -0.34
NEDD9-213ENST00000512665 IRS4O14654 1257 aaPredicted RBP12.92□□□□□ -0.34
NEDD9-213ENST00000512665 CTGFP29279 349 aa12.92□□□□□ -0.34
NEDD9-213ENST00000512665 MAGEA10P43363 369 aaPredicted RBP12.92□□□□□ -0.34
NEDD9-213ENST00000512665 PSMC4P43686 418 aa12.92□□□□□ -0.34
NEDD9-213ENST00000512665 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
NEDD9-213ENST00000512665 DLGAP5Q15398 846 aa12.92□□□□□ -0.34
NEDD9-213ENST00000512665 NBPF12Q5TAG4 269 aaPredicted RBP12.92□□□□□ -0.34
NEDD9-213ENST00000512665 UNC93B1Q9H1C4 597 aa12.92□□□□□ -0.34
NEDD9-213ENST00000512665 ELP3Q9H9T3 547 aa12.92□□□□□ -0.34
NEDD9-213ENST00000512665 NUDCQ9Y266 331 aa12.92□□□□□ -0.34
NEDD9-213ENST00000512665 IRS2Q9Y4H2 1338 aa12.91□□□□□ -0.34
NEDD9-213ENST00000512665 MYO1BO43795 1136 aa12.91□□□□□ -0.34
NEDD9-213ENST00000512665 CETPP11597 493 aa12.91□□□□□ -0.34
NEDD9-213ENST00000512665 CC2D1BQ5T0F9 858 aaKnown RBP12.91□□□□□ -0.34
NEDD9-213ENST00000512665 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.91□□□□□ -0.34
NEDD9-213ENST00000512665 NECAB2Q7Z6G3 386 aa12.91□□□□□ -0.34
NEDD9-213ENST00000512665 KIAA0825Q8IV33 1275 aa12.91□□□□□ -0.34
NEDD9-213ENST00000512665 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
NEDD9-213ENST00000512665 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
NEDD9-213ENST00000512665 SEC31BQ9NQW1 1179 aa12.91□□□□□ -0.34
NEDD9-213ENST00000512665 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.91□□□□□ -0.34
NEDD9-213ENST00000512665 SYNGAP1Q96PV0 1343 aa12.9□□□□□ -0.34
NEDD9-213ENST00000512665 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.34
NEDD9-213ENST00000512665 TNFRSF10AO00220 468 aa12.9□□□□□ -0.34
NEDD9-213ENST00000512665 ANXA1P04083 346 aa12.9□□□□□ -0.34
NEDD9-213ENST00000512665 VGLL4Q14135 290 aa12.9□□□□□ -0.34
NEDD9-213ENST00000512665 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.34
NEDD9-213ENST00000512665 C7orf61Q8IZ16 206 aa12.9□□□□□ -0.34
NEDD9-213ENST00000512665 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
NEDD9-213ENST00000512665 PLBD2Q8NHP8 589 aa12.9□□□□□ -0.34
NEDD9-213ENST00000512665 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
NEDD9-213ENST00000512665 BIN2Q9UBW5 565 aaPredicted RBP12.9□□□□□ -0.34
NEDD9-213ENST00000512665 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
NEDD9-213ENST00000512665 SPDYE5A6NIY4 337 aa12.89□□□□□ -0.35
NEDD9-213ENST00000512665 BTBD19C9JJ37 291 aa12.89□□□□□ -0.35
NEDD9-213ENST00000512665 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
NEDD9-213ENST00000512665 U2AF1L5P0DN76 240 aaPredicted RBP12.89□□□□□ -0.35
NEDD9-213ENST00000512665 HSPA5P11021 654 aaKnown RBP12.89□□□□□ -0.35
NEDD9-213ENST00000512665 U2AF1Q01081 240 aaKnown RBP eCLIP12.89□□□□□ -0.35
NEDD9-213ENST00000512665 AIMP1Q12904 312 aaKnown RBP12.89□□□□□ -0.35
NEDD9-213ENST00000512665 CCDC152Q4G0S7 254 aa12.89□□□□□ -0.35
NEDD9-213ENST00000512665 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.89□□□□□ -0.35
NEDD9-213ENST00000512665 MAFAQ8NHW3 353 aaPredicted RBP12.89□□□□□ -0.35
NEDD9-213ENST00000512665 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
NEDD9-213ENST00000512665 PAWRQ96IZ0 340 aaKnown RBP12.89□□□□□ -0.35
NEDD9-213ENST00000512665 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
NEDD9-213ENST00000512665 TFRCP02786 760 aaKnown RBP12.88□□□□□ -0.35
NEDD9-213ENST00000512665 EIF2S2P20042 333 aaKnown RBP12.88□□□□□ -0.35
NEDD9-213ENST00000512665 TNFAIP1Q13829 316 aa12.88□□□□□ -0.35
NEDD9-213ENST00000512665 RASA3Q14644 834 aa12.88□□□□□ -0.35
NEDD9-213ENST00000512665 ANKRD18AQ8IVF6 992 aa12.88□□□□□ -0.35
NEDD9-213ENST00000512665 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
NEDD9-213ENST00000512665 PXYLP1Q8TE99 480 aa12.88□□□□□ -0.35
NEDD9-213ENST00000512665 RAPGEFL1Q9UHV5 662 aa12.88□□□□□ -0.35
NEDD9-213ENST00000512665 ZMYND8Q9ULU4 1186 aaPredicted RBP12.88□□□□□ -0.35
NEDD9-213ENST00000512665 CDH23Q9H251 3354 aa12.88□□□□□ -0.35
NEDD9-213ENST00000512665 FMNL1O95466 1100 aaPredicted RBP12.87□□□□□ -0.35
NEDD9-213ENST00000512665 PRKCZQ05513 592 aa12.87□□□□□ -0.35
NEDD9-213ENST00000512665 SNAPC2Q13487 334 aa12.87□□□□□ -0.35
NEDD9-213ENST00000512665 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
NEDD9-213ENST00000512665 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
NEDD9-213ENST00000512665 CSADQ9Y600 493 aa12.87□□□□□ -0.35
NEDD9-213ENST00000512665 FCGRTP55899 365 aa12.86□□□□□ -0.35
NEDD9-213ENST00000512665 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
NEDD9-213ENST00000512665 TJAP1Q5JTD0 557 aa12.86□□□□□ -0.35
NEDD9-213ENST00000512665 ZNF697Q5TEC3 545 aa12.86□□□□□ -0.35
NEDD9-213ENST00000512665 ERO1BQ86YB8 467 aa12.86□□□□□ -0.35
NEDD9-213ENST00000512665 DEFB118Q96PH6 123 aa12.86□□□□□ -0.35
NEDD9-213ENST00000512665 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
NEDD9-213ENST00000512665 CLRN2A0PK11 232 aa12.85□□□□□ -0.35
NEDD9-213ENST00000512665 INHAP05111 366 aa12.85□□□□□ -0.35
NEDD9-213ENST00000512665 CCT4P50991 539 aaKnown RBP12.85□□□□□ -0.35
NEDD9-213ENST00000512665 IRF5Q13568 498 aa12.85□□□□□ -0.35
NEDD9-213ENST00000512665 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
NEDD9-213ENST00000512665 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
NEDD9-213ENST00000512665 CDX2Q99626 313 aaPredicted RBP12.85□□□□□ -0.35
NEDD9-213ENST00000512665 BSDC1Q9NW68 430 aaPredicted RBP12.85□□□□□ -0.35
NEDD9-213ENST00000512665 CPA4Q9UI42 421 aa12.85□□□□□ -0.35
NEDD9-213ENST00000512665 TSPYL4Q9UJ04 414 aa12.85□□□□□ -0.35
NEDD9-213ENST00000512665 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms