RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 ZNF280AP59817 542 aaPredicted RBP19.41■□□□□ 0.7
SGCA-208ENST00000512526 FBXW7Q969H0 707 aa19.41■□□□□ 0.7
SGCA-208ENST00000512526 DBNDD2Q9BQY9 259 aa19.41■□□□□ 0.7
SGCA-208ENST00000512526 IL1RAPL2Q9NP60 686 aa19.41■□□□□ 0.7
SGCA-208ENST00000512526 GNL3LQ9NVN8 582 aaKnown RBP19.41■□□□□ 0.7
SGCA-208ENST00000512526 WDR90Q96KV7 1748 aa19.41■□□□□ 0.7
SGCA-208ENST00000512526 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
SGCA-208ENST00000512526 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
SGCA-208ENST00000512526 MICALL2Q8IY33 904 aa19.4■□□□□ 0.7
SGCA-208ENST00000512526 CCDC8Q9H0W5 538 aaPredicted RBP19.4■□□□□ 0.7
SGCA-208ENST00000512526 DBNLQ9UJU6 430 aaKnown RBP19.4■□□□□ 0.7
SGCA-208ENST00000512526 JAG2Q9Y219 1238 aa19.4■□□□□ 0.7
SGCA-208ENST00000512526 MYO3BQ8WXR4 1341 aa19.4■□□□□ 0.7
SGCA-208ENST00000512526 H7C1D1 291 aa19.39■□□□□ 0.69
SGCA-208ENST00000512526 SEMA3EO15041 775 aa19.39■□□□□ 0.69
SGCA-208ENST00000512526 FRAT2O75474 233 aaPredicted RBP19.39■□□□□ 0.69
SGCA-208ENST00000512526 IGHDP01880 384 aa19.39■□□□□ 0.69
SGCA-208ENST00000512526 USP17L8P0C7I0 530 aa19.39■□□□□ 0.69
SGCA-208ENST00000512526 CLASRPQ8N2M8 674 aaKnown RBP19.39■□□□□ 0.69
SGCA-208ENST00000512526 LRRCC1Q9C099 1032 aa19.39■□□□□ 0.69
SGCA-208ENST00000512526 ADARB2Q9NS39 739 aaKnown RBP19.39■□□□□ 0.69
SGCA-208ENST00000512526 TLR7Q9NYK1 1049 aaKnown RBP19.39■□□□□ 0.69
SGCA-208ENST00000512526 ARID4AP29374 1257 aaPredicted RBP19.38■□□□□ 0.69
SGCA-208ENST00000512526 MMP14P50281 582 aa19.38■□□□□ 0.69
SGCA-208ENST00000512526 CHAF1AQ13111 956 aaPredicted RBP19.38■□□□□ 0.69
SGCA-208ENST00000512526 SCN9AQ15858 1988 aa19.38■□□□□ 0.69
SGCA-208ENST00000512526 MFSD14BQ5SR56 506 aa19.38■□□□□ 0.69
SGCA-208ENST00000512526 GORABQ5T7V8 394 aa19.38■□□□□ 0.69
SGCA-208ENST00000512526 USP50Q70EL3 339 aaPredicted RBP19.38■□□□□ 0.69
SGCA-208ENST00000512526 AACSQ86V21 672 aa19.38■□□□□ 0.69
SGCA-208ENST00000512526 PNMA8AQ86V59 439 aaPredicted RBP19.38■□□□□ 0.69
SGCA-208ENST00000512526 ZNF512BQ96KM6 892 aaPredicted RBP19.38■□□□□ 0.69
SGCA-208ENST00000512526 DENND2AQ9ULE3 1009 aa19.38■□□□□ 0.69
SGCA-208ENST00000512526 SMARCA5O60264 1052 aaPredicted RBP19.37■□□□□ 0.69
SGCA-208ENST00000512526 HIRAP54198 1017 aaPredicted RBP19.37■□□□□ 0.69
SGCA-208ENST00000512526 RASGRF1Q13972 1273 aa19.37■□□□□ 0.69
SGCA-208ENST00000512526 GRIK5Q16478 980 aa19.37■□□□□ 0.69
SGCA-208ENST00000512526 TBC1D22AQ8WUA7 517 aa19.37■□□□□ 0.69
SGCA-208ENST00000512526 RWDD1Q9H446 243 aaPredicted RBP19.37■□□□□ 0.69
SGCA-208ENST00000512526 PDS5AQ29RF7 1337 aaKnown RBP19.36■□□□□ 0.69
SGCA-208ENST00000512526 TOMM70O94826 608 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 EGFRP00533 1210 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 UQCRFS1P1P0C7P4 283 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 POTEIP0CG38 1075 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 POTEJP0CG39 1038 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 SCARF1Q14162 830 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 CCDC158Q5M9N0 1113 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 SAMD7Q7Z3H4 446 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 KIAA0825Q8IV33 1275 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 WDR66Q8TBY9 1149 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 TRPM4Q8TD43 1214 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 GCC1Q96CN9 775 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 HMG20BQ9P0W2 317 aa19.36■□□□□ 0.69
SGCA-208ENST00000512526 C16orf71Q8IYS4 520 aaPredicted RBP19.35■□□□□ 0.69
SGCA-208ENST00000512526 PGAP2Q9UHJ9 254 aa19.35■□□□□ 0.69
SGCA-208ENST00000512526 SUGT1Q9Y2Z0 365 aa19.35■□□□□ 0.69
SGCA-208ENST00000512526 COL1A1P02452 1464 aaPredicted RBP19.35■□□□□ 0.69
SGCA-208ENST00000512526 SALL1Q9NSC2 1324 aa19.34■□□□□ 0.69
SGCA-208ENST00000512526 IFIT2P09913 472 aaKnown RBP19.34■□□□□ 0.69
SGCA-208ENST00000512526 MCAMP43121 646 aa19.34■□□□□ 0.69
SGCA-208ENST00000512526 TBC1D10BQ4KMP7 808 aaPredicted RBP19.34■□□□□ 0.69
SGCA-208ENST00000512526 EAPPQ56P03 285 aaPredicted RBP19.34■□□□□ 0.69
SGCA-208ENST00000512526 TTC39AQ5SRH9 613 aa19.34■□□□□ 0.69
SGCA-208ENST00000512526 SMC5Q8IY18 1101 aa19.34■□□□□ 0.69
SGCA-208ENST00000512526 OGFOD1Q8N543 542 aa19.34■□□□□ 0.69
SGCA-208ENST00000512526 RBM46Q8TBY0 533 aaKnown RBP19.34■□□□□ 0.69
SGCA-208ENST00000512526 MYOZ2Q9NPC6 264 aa19.34■□□□□ 0.69
SGCA-208ENST00000512526 PI16Q6UXB8 463 aa19.33■□□□□ 0.68
SGCA-208ENST00000512526 LDHDQ86WU2 507 aa19.33■□□□□ 0.68
SGCA-208ENST00000512526 SPATA5Q8NB90 893 aa19.33■□□□□ 0.68
SGCA-208ENST00000512526 MRIQ9BWK5 157 aa19.33■□□□□ 0.68
SGCA-208ENST00000512526 F8W031 263 aaPredicted RBP19.32■□□□□ 0.68
SGCA-208ENST00000512526 RBM26Q5T8P6 1007 aaKnown RBP19.32■□□□□ 0.68
SGCA-208ENST00000512526 MTMR14Q8NCE2 650 aa19.32■□□□□ 0.68
SGCA-208ENST00000512526 ZC3H15Q8WU90 426 aaKnown RBP19.32■□□□□ 0.68
SGCA-208ENST00000512526 ZBED3Q96IU2 234 aaPredicted RBP19.32■□□□□ 0.68
SGCA-208ENST00000512526 HDAC9Q9UKV0 1011 aa19.32■□□□□ 0.68
SGCA-208ENST00000512526 KIF4BQ2VIQ3 1234 aa19.31■□□□□ 0.68
SGCA-208ENST00000512526 TTF2Q9UNY4 1162 aaKnown RBP19.31■□□□□ 0.68
SGCA-208ENST00000512526 HDLBPQ00341 1268 aaKnown RBP19.3■□□□□ 0.68
SGCA-208ENST00000512526 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
SGCA-208ENST00000512526 CHADLQ6NUI6 762 aa19.3■□□□□ 0.68
SGCA-208ENST00000512526 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
SGCA-208ENST00000512526 SNRKQ9NRH2 765 aa19.3■□□□□ 0.68
SGCA-208ENST00000512526 SERPINA10Q9UK55 444 aa19.3■□□□□ 0.68
SGCA-208ENST00000512526 SCN4AP35499 1836 aa19.3■□□□□ 0.68
SGCA-208ENST00000512526 WNT10BO00744 389 aa19.29■□□□□ 0.68
SGCA-208ENST00000512526 PRDX5P30044 214 aa19.29■□□□□ 0.68
SGCA-208ENST00000512526 ZAP70P43403 619 aa19.29■□□□□ 0.68
SGCA-208ENST00000512526 FSTL1Q12841 308 aa19.29■□□□□ 0.68
SGCA-208ENST00000512526 TBC1D9Q6ZT07 1266 aa19.29■□□□□ 0.68
SGCA-208ENST00000512526 ZGPATQ8N5A5 531 aaKnown RBP19.29■□□□□ 0.68
SGCA-208ENST00000512526 SMC1BQ8NDV3 1235 aa19.29■□□□□ 0.68
SGCA-208ENST00000512526 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.29■□□□□ 0.68
SGCA-208ENST00000512526 CLEC11AQ9Y240 323 aa19.29■□□□□ 0.68
SGCA-208ENST00000512526 ZNF646O15015 1829 aaPredicted RBP19.28■□□□□ 0.68
SGCA-208ENST00000512526 CYP2E1P05181 493 aaPredicted RBP19.28■□□□□ 0.68
SGCA-208ENST00000512526 LDHBP07195 334 aaKnown RBP19.28■□□□□ 0.68
SGCA-208ENST00000512526 ATP5JP18859 108 aa19.28■□□□□ 0.68
SGCA-208ENST00000512526 NBPF9Q3BBW0 867 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms