RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 LMOD1P29536 600 aaPredicted RBP13.87□□□□□ -0.19
PRDM16-207ENST00000512462 POLA2Q14181 598 aa13.87□□□□□ -0.19
PRDM16-207ENST00000512462 UBAP1LF5GYI3 381 aa13.87□□□□□ -0.19
PRDM16-207ENST00000512462 ATP5JP18859 108 aa13.87□□□□□ -0.19
PRDM16-207ENST00000512462 AOPEPQ8N6M6 819 aa13.87□□□□□ -0.19
PRDM16-207ENST00000512462 SEC31BQ9NQW1 1179 aa13.87□□□□□ -0.19
PRDM16-207ENST00000512462 E7EWF7 191 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 C6orf229H3BNL8 230 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 TCIRG1Q13488 830 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 HLFQ16534 295 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 JMYQ8N9B5 988 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
PRDM16-207ENST00000512462 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.86□□□□□ -0.19
PRDM16-207ENST00000512462 SLC3A2P08195 630 aaKnown RBP13.86□□□□□ -0.19
PRDM16-207ENST00000512462 ADD1P35611 737 aaKnown RBP13.86□□□□□ -0.19
PRDM16-207ENST00000512462 BRINP3Q76B58 766 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 BRMS1Q9HCU9 246 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 INCENPQ9NQS7 918 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 ZNF652Q9Y2D9 606 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 ANKARQ7Z5J8 1434 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 PIK3C2AO00443 1686 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 HSPD1P10809 573 aaKnown RBP13.86□□□□□ -0.19
PRDM16-207ENST00000512462 PHKA1P46020 1223 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 TRMT1LQ7Z2T5 733 aaKnown RBP13.86□□□□□ -0.19
PRDM16-207ENST00000512462 ZSCAN29Q8IWY8 852 aaPredicted RBP13.86□□□□□ -0.19
PRDM16-207ENST00000512462 TRIM34Q9BYJ4 488 aa13.86□□□□□ -0.19
PRDM16-207ENST00000512462 AFMP43652 599 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
PRDM16-207ENST00000512462 PTPN21Q16825 1174 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 DDX19AQ9NUU7 478 aaKnown RBP13.85□□□□□ -0.19
PRDM16-207ENST00000512462 FMN2Q9NZ56 1722 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 CDKL5O76039 1030 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 SSBP05455 408 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRDM16-207ENST00000512462 CNNM3Q8NE01 707 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 UIMC1Q96RL1 719 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 UTP14AQ9BVJ6 771 aaKnown RBP13.85□□□□□ -0.19
PRDM16-207ENST00000512462 ZNF532Q9HCE3 1301 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 CCDC152Q4G0S7 254 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 NBPF14Q5TI25 921 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 NBPF10Q6P3W6 841 aaKnown RBP13.85□□□□□ -0.19
PRDM16-207ENST00000512462 TMC6Q7Z403 805 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 NBPF15Q8N660 670 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 PIGBQ92521 554 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 MAP4K1Q92918 833 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 ZHX3Q9H4I2 956 aa13.85□□□□□ -0.19
PRDM16-207ENST00000512462 TSPY2A6NKD2 308 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 NR1I2O75469 434 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 BCAMP50895 628 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 SSRP1Q08945 709 aaKnown RBP13.84□□□□□ -0.19
PRDM16-207ENST00000512462 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 NOC3LQ8WTT2 800 aaKnown RBP13.84□□□□□ -0.19
PRDM16-207ENST00000512462 LEO1Q8WVC0 666 aaPredicted RBP13.84□□□□□ -0.19
PRDM16-207ENST00000512462 ZSWIM6Q9HCJ5 1215 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
PRDM16-207ENST00000512462 ZKSCAN5Q9Y2L8 839 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 WTAPQ15007 396 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 A0A0G2JLW4 131 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 FSD2A1L4K1 749 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 FGAP02671 866 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 TPM3P06753 285 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 GYG1P46976 350 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 SDR42E1Q8WUS8 393 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 COPRSQ9NQ92 184 aa13.84□□□□□ -0.19
PRDM16-207ENST00000512462 ERBB4Q15303 1308 aa13.83□□□□□ -0.19
PRDM16-207ENST00000512462 GNPATO15228 680 aa13.83□□□□□ -0.2
PRDM16-207ENST00000512462 FAM200AQ8TCP9 573 aa13.83□□□□□ -0.2
PRDM16-207ENST00000512462 CDC5LQ99459 802 aaKnown RBP13.83□□□□□ -0.2
PRDM16-207ENST00000512462 AOX1Q06278 1338 aa13.83□□□□□ -0.2
PRDM16-207ENST00000512462 SH3TC1Q8TE82 1336 aa13.83□□□□□ -0.2
PRDM16-207ENST00000512462 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.2
PRDM16-207ENST00000512462 OSBP2Q969R2 916 aa13.83□□□□□ -0.2
PRDM16-207ENST00000512462 AIFM3Q96NN9 605 aa13.83□□□□□ -0.2
PRDM16-207ENST00000512462 PLIN2Q99541 437 aa13.83□□□□□ -0.2
PRDM16-207ENST00000512462 ZNF445P59923 1031 aa13.82□□□□□ -0.2
PRDM16-207ENST00000512462 IQCA1Q86XH1 822 aa13.82□□□□□ -0.2
PRDM16-207ENST00000512462 USP28Q96RU2 1077 aa13.82□□□□□ -0.2
PRDM16-207ENST00000512462 ANO10Q9NW15 660 aa13.82□□□□□ -0.2
PRDM16-207ENST00000512462 KCNJ14Q9UNX9 436 aa13.82□□□□□ -0.2
PRDM16-207ENST00000512462 MPHOSPH10O00566 681 aaKnown RBP13.82□□□□□ -0.2
PRDM16-207ENST00000512462 SCRN1Q12765 414 aa13.82□□□□□ -0.2
PRDM16-207ENST00000512462 STAMQ92783 540 aa13.82□□□□□ -0.2
PRDM16-207ENST00000512462 STX17P56962 302 aa13.82□□□□□ -0.2
PRDM16-207ENST00000512462 MNS1Q8NEH6 495 aa13.82□□□□□ -0.2
PRDM16-207ENST00000512462 SPTLC2O15270 562 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 RFC4P35249 363 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 NOLC1Q14978 699 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRDM16-207ENST00000512462 NAA16Q6N069 864 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-207ENST00000512462 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 SETDB2Q96T68 719 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 PUS7LQ9H0K6 701 aaKnown RBP13.81□□□□□ -0.2
PRDM16-207ENST00000512462 ADGRL3Q9HAR2 1447 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 ZNF142P52746 1687 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-207ENST00000512462 M0R2C6 588 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 SYKP43405 635 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 TTF1Q15361 905 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-207ENST00000512462 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-207ENST00000512462 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
PRDM16-207ENST00000512462 ZFYP08048 801 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms