RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
DDX41-215ENST00000512431 ZFYVE28Q9HCC9 887 aa16.14■□□□□ 0.17
DDX41-215ENST00000512431 F8W031 263 aaPredicted RBP16.13■□□□□ 0.17
DDX41-215ENST00000512431 RBM5P52756 815 aaKnown RBP eCLIP16.13■□□□□ 0.17
DDX41-215ENST00000512431 CFAP100Q494V2 611 aa16.13■□□□□ 0.17
DDX41-215ENST00000512431 OPTNQ96CV9 577 aa16.13■□□□□ 0.17
DDX41-215ENST00000512431 PTPN18Q99952 460 aa16.13■□□□□ 0.17
DDX41-215ENST00000512431 CENPFP49454 3210 aa16.13■□□□□ 0.17
DDX41-215ENST00000512431 PI4KAP2A4QPH2 592 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 H0YGN5 161 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 IGKV5-2P06315 115 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 ZNF853P0CG23 659 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 ITGA6P23229 1130 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 KLRK1P26718 216 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 GJA5P36382 358 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 TNFAIP1Q13829 316 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 KIF22Q14807 665 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 TAF1CQ15572 869 aaPredicted RBP16.12■□□□□ 0.17
DDX41-215ENST00000512431 PI4KAP1Q8N8J0 262 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 ELP3Q9H9T3 547 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 PTCH2Q9Y6C5 1203 aa16.12■□□□□ 0.17
DDX41-215ENST00000512431 SPDYE2BA6NHP3 402 aa16.11■□□□□ 0.17
DDX41-215ENST00000512431 MYCP01106 439 aaPredicted RBP16.11■□□□□ 0.17
DDX41-215ENST00000512431 SPDYE6P0CI01 402 aa16.11■□□□□ 0.17
DDX41-215ENST00000512431 RASA3Q14644 834 aa16.11■□□□□ 0.17
DDX41-215ENST00000512431 PRMT6Q96LA8 375 aaPredicted RBP16.11■□□□□ 0.17
DDX41-215ENST00000512431 SSC5DA1L4H1 1573 aa16.11■□□□□ 0.17
DDX41-215ENST00000512431 GTF2A2P52657 109 aa16.1■□□□□ 0.17
DDX41-215ENST00000512431 FKBP1AP62942 108 aaKnown RBP16.1■□□□□ 0.17
DDX41-215ENST00000512431 CHRNDQ07001 517 aa16.1■□□□□ 0.17
DDX41-215ENST00000512431 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
DDX41-215ENST00000512431 UBE3BQ7Z3V4 1068 aa16.1■□□□□ 0.17
DDX41-215ENST00000512431 ZNF804AQ7Z570 1209 aa16.1■□□□□ 0.17
DDX41-215ENST00000512431 CERS5Q8N5B7 392 aa16.1■□□□□ 0.17
DDX41-215ENST00000512431 STK31Q9BXU1 1019 aa16.1■□□□□ 0.17
DDX41-215ENST00000512431 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
DDX41-215ENST00000512431 PCDHAC2Q9Y5I4 1007 aa16.1■□□□□ 0.17
DDX41-215ENST00000512431 ZNF646O15015 1829 aaPredicted RBP16.1■□□□□ 0.17
DDX41-215ENST00000512431 CCL15-CCL14A0A0B4J2E2 113 aa16.09■□□□□ 0.17
DDX41-215ENST00000512431 NEURL1BA8MQ27 555 aa16.09■□□□□ 0.17
DDX41-215ENST00000512431 H7C1W4 665 aa16.09■□□□□ 0.17
DDX41-215ENST00000512431 CCL15Q16663 113 aa16.09■□□□□ 0.17
DDX41-215ENST00000512431 CHRDL2Q6WN34 429 aa16.09■□□□□ 0.17
DDX41-215ENST00000512431 C8orf58Q8NAV2 365 aa16.09■□□□□ 0.17
DDX41-215ENST00000512431 DPF3Q92784 378 aa16.09■□□□□ 0.17
DDX41-215ENST00000512431 OTUD5Q96G74 571 aa16.09■□□□□ 0.17
DDX41-215ENST00000512431 MS4A4AQ96JQ5 239 aa16.09■□□□□ 0.17
DDX41-215ENST00000512431 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
DDX41-215ENST00000512431 SPEF2Q9C093 1822 aa16.08■□□□□ 0.17
DDX41-215ENST00000512431 ANKRD18BA2A2Z9 1011 aa16.08■□□□□ 0.16
DDX41-215ENST00000512431 CAP1Q01518 475 aa16.08■□□□□ 0.16
DDX41-215ENST00000512431 CSADQ9Y600 493 aa16.08■□□□□ 0.16
DDX41-215ENST00000512431 GNRH1P01148 92 aa16.07■□□□□ 0.16
DDX41-215ENST00000512431 IL1R1P14778 569 aa16.07■□□□□ 0.16
DDX41-215ENST00000512431 PRMT2P55345 433 aa16.07■□□□□ 0.16
DDX41-215ENST00000512431 C15orf52Q6ZUT6 534 aaKnown RBP16.07■□□□□ 0.16
DDX41-215ENST00000512431 SH3TC2Q8TF17 1288 aa16.07■□□□□ 0.16
DDX41-215ENST00000512431 BRI3BPQ8WY22 251 aa16.07■□□□□ 0.16
DDX41-215ENST00000512431 PLA2G12BQ9BX93 195 aa16.07■□□□□ 0.16
DDX41-215ENST00000512431 LAMB1P07942 1786 aa16.07■□□□□ 0.16
DDX41-215ENST00000512431 TAF5LO75529 589 aa16.06■□□□□ 0.16
DDX41-215ENST00000512431 CSF1RP07333 972 aa16.06■□□□□ 0.16
DDX41-215ENST00000512431 TNNI2P48788 182 aa16.06■□□□□ 0.16
DDX41-215ENST00000512431 MAP3K9P80192 1104 aa16.06■□□□□ 0.16
DDX41-215ENST00000512431 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
DDX41-215ENST00000512431 KIAA0100Q14667 2235 aaKnown RBP16.06■□□□□ 0.16
DDX41-215ENST00000512431 MYH3P11055 1940 aa16.06■□□□□ 0.16
DDX41-215ENST00000512431 BRCA2P51587 3418 aa16.05■□□□□ 0.16
DDX41-215ENST00000512431 DLL1O00548 723 aa16.05■□□□□ 0.16
DDX41-215ENST00000512431 GCKRQ14397 625 aa16.05■□□□□ 0.16
DDX41-215ENST00000512431 SLC17A8Q8NDX2 589 aa16.05■□□□□ 0.16
DDX41-215ENST00000512431 HELBQ8NG08 1087 aaPredicted RBP16.05■□□□□ 0.16
DDX41-215ENST00000512431 NKX2-3Q8TAU0 364 aa16.05■□□□□ 0.16
DDX41-215ENST00000512431 ZNF70Q9UC06 446 aaPredicted RBP16.05■□□□□ 0.16
DDX41-215ENST00000512431 SNAP23O00161 211 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 TLR2O60603 784 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 CETPP11597 493 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 LACTBP83111 547 aaPredicted RBP16.04■□□□□ 0.16
DDX41-215ENST00000512431 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
DDX41-215ENST00000512431 VGLL4Q14135 290 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.04■□□□□ 0.16
DDX41-215ENST00000512431 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 HTATIP2Q9BUP3 242 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 TDRD3Q9H7E2 651 aaKnown RBP16.04■□□□□ 0.16
DDX41-215ENST00000512431 ZCCHC17Q9NP64 241 aaKnown RBP16.04■□□□□ 0.16
DDX41-215ENST00000512431 RBM27Q9P2N5 1060 aaKnown RBP16.04■□□□□ 0.16
DDX41-215ENST00000512431 SERPINA10Q9UK55 444 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 JAG2Q9Y219 1238 aa16.04■□□□□ 0.16
DDX41-215ENST00000512431 ECM29Q5VYK3 1845 aa16.03■□□□□ 0.16
DDX41-215ENST00000512431 APAF1O14727 1248 aa16.03■□□□□ 0.16
DDX41-215ENST00000512431 TTF2Q9UNY4 1162 aaKnown RBP16.03■□□□□ 0.16
DDX41-215ENST00000512431 AOX1Q06278 1338 aa16.02■□□□□ 0.16
DDX41-215ENST00000512431 IRS2Q9Y4H2 1338 aa16.02■□□□□ 0.16
DDX41-215ENST00000512431 TCP10L2B9ZVM9 353 aa16.02■□□□□ 0.16
DDX41-215ENST00000512431 HOXD10P28358 340 aa16.02■□□□□ 0.16
DDX41-215ENST00000512431 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
DDX41-215ENST00000512431 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms